CircRNA Information

General Information
circRNA Basic Information
CircID chr17:75727485|75727749
Strand +
CircType exon
Host Gene ENSG00000132470.12;
Algorism CIRI2;
Sequence CTCCAGCTCAAAATGCCGCTCCTCACCGGGCCGCAGACGGACCCGCAGGCCTTGGGGGGACATCTGGCTGCGCCGCAGGGTGGTGTCAATCTGGGTCTCCTGCAGCCAGTGGAAGGGGACAGCTGGCTAGAGGGTCACTCCGGAGGCCCGATGGGGGCCCAGCCCGGCCAAGGGGCACTATACACCCCCATAAATAGCCAGGCTGAGCATGGGGAGCCCCCACCCCAGTCCCCACACCAGGCACCTCTGTGATTTGGAAGCTGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:75727485|75727749 hsa-miR-519e-5p 0 0 1
chr17:75727485|75727749 hsa-miR-519e-3p 0 0 1
chr17:75727485|75727749 hsa-miR-504-5p 0 0 1
chr17:75727485|75727749 hsa-miR-504-3p 0 0 1
chr17:75727485|75727749 hsa-miR-558 0 0 1
chr17:75727485|75727749 hsa-miR-575 0 0 1
chr17:75727485|75727749 hsa-miR-604 0 0 1
chr17:75727485|75727749 hsa-miR-608 0 0 1
chr17:75727485|75727749 hsa-miR-646 0 0 1
chr17:75727485|75727749 hsa-miR-647 0 0 1
chr17:75727485|75727749 hsa-miR-661 0 0 1
chr17:75727485|75727749 hsa-miR-892b 0 1 1
chr17:75727485|75727749 hsa-miR-1203 0 0 1
chr17:75727485|75727749 hsa-miR-1205 0 0 1
chr17:75727485|75727749 hsa-miR-1286 0 0 1
chr17:75727485|75727749 hsa-miR-1251-5p 0 0 1
chr17:75727485|75727749 hsa-miR-1251-3p 0 0 1
chr17:75727485|75727749 hsa-miR-296-5p 0 0 1
chr17:75727485|75727749 hsa-miR-491-5p 0 0 1
chr17:75727485|75727749 hsa-miR-342-5p 0 0 1
chr17:75727485|75727749 hsa-miR-515-3p 0 0 1
chr17:75727485|75727749 hsa-miR-220b 0 0 1
chr17:75727485|75727749 hsa-miR-550 0 0 1
chr17:75727485|75727749 hsa-miR-514 0 0 1
chr17:75727485|75727749 hsa-miR-1254 0 0 1
chr17:75727485|75727749 hsa-miR-371-3p 0 0 1
chr17:75727485|75727749 hsa-miR-886-3p 0 0 1
chr17:75727485|75727749 hsa-miR-637 0 1 0
chr17:75727485|75727749 hsa-miR-663a 1 0 0
chr17:75727485|75727749 hsa-miR-762 1 1 0
chr17:75727485|75727749 hsa-miR-1913 1 0 0
chr17:75727485|75727749 hsa-miR-2861 1 0 0
chr17:75727485|75727749 hsa-miR-3181 0 1 0
chr17:75727485|75727749 hsa-miR-3196 1 0 0
chr17:75727485|75727749 hsa-miR-4257 1 0 0
chr17:75727485|75727749 hsa-miR-3621 0 1 0
chr17:75727485|75727749 hsa-miR-4447 0 1 0
chr17:75727485|75727749 hsa-miR-4463 1 1 0
chr17:75727485|75727749 hsa-miR-4492 0 1 0
chr17:75727485|75727749 hsa-miR-4505 0 1 0
chr17:75727485|75727749 hsa-miR-4538 1 0 0
chr17:75727485|75727749 hsa-miR-4651 1 0 0
chr17:75727485|75727749 hsa-miR-4683 1 0 0
chr17:75727485|75727749 hsa-miR-4734 1 1 0
chr17:75727485|75727749 hsa-miR-5100 0 1 0
chr17:75727485|75727749 hsa-miR-5787 0 1 0
chr17:75727485|75727749 hsa-miR-8052 0 1 0
chr17:75727485|75727749 hsa-miR-8089 1 1 0
chr17:75727485|75727749 hsa-miR-92a-2-5p 0 1 0
chr17:75727485|75727749 hsa-miR-4768-3p 0 1 0
chr17:75727485|75727749 hsa-miR-3064-5p 0 1 0
chr17:75727485|75727749 hsa-miR-3189-5p 0 1 0
chr17:75727485|75727749 hsa-miR-127-3p 1 0 0
chr17:75727485|75727749 hsa-miR-3180-3p 1 0 0
chr17:75727485|75727749 hsa-miR-6796-5p 1 1 0
chr17:75727485|75727749 hsa-miR-6732-5p 1 0 0
chr17:75727485|75727749 hsa-miR-6782-5p 1 0 0
chr17:75727485|75727749 hsa-miR-6810-5p 1 1 0
chr17:75727485|75727749 hsa-miR-2277-3p 1 0 0
chr17:75727485|75727749 hsa-miR-4783-3p 1 1 0
chr17:75727485|75727749 hsa-miR-6749-5p 1 0 0
chr17:75727485|75727749 hsa-miR-4787-5p 1 0 0
chr17:75727485|75727749 hsa-miR-3190-5p 0 1 0
chr17:75727485|75727749 hsa-miR-3922-5p 0 1 0
chr17:75727485|75727749 hsa-miR-1225-5p 1 0 0
chr17:75727485|75727749 hsa-miR-4652-5p 0 1 0
chr17:75727485|75727749 hsa-miR-6871-3p 1 0 0
chr17:75727485|75727749 hsa-miR-4746-3p 1 0 0
chr17:75727485|75727749 hsa-miR-3620-3p 0 1 0
chr17:75727485|75727749 hsa-miR-219b-5p 0 1 0
chr17:75727485|75727749 hsa-miR-514a-3p 0 1 0
chr17:75727485|75727749 hsa-miR-1343-5p 1 0 0
chr17:75727485|75727749 hsa-miR-5001-5p 0 1 0
chr17:75727485|75727749 hsa-miR-6737-5p 0 1 0
chr17:75727485|75727749 hsa-miR-6752-5p 1 1 0
chr17:75727485|75727749 hsa-miR-6754-5p 1 0 0
chr17:75727485|75727749 hsa-miR-6756-5p 1 1 0
chr17:75727485|75727749 hsa-miR-6803-5p 1 0 0
chr17:75727485|75727749 hsa-miR-6813-5p 1 0 0
chr17:75727485|75727749 hsa-miR-6819-5p 0 1 0
chr17:75727485|75727749 hsa-miR-6842-5p 0 1 0
chr17:75727485|75727749 hsa-miR-7107-5p 1 1 0
chr17:75727485|75727749 hsa-miR-7110-5p 0 1 0
chr17:75727485|75727749 hsa-miR-10401-5p 0 1 0
chr17:75727485|75727749 hsa-miR-6751-5p 1 1 0
chr17:75727485|75727749 hsa-miR-6763-5p 1 0 0
chr17:75727485|75727749 hsa-miR-3127-3p 1 1 0
chr17:75727485|75727749 hsa-miR-3620-5p 1 0 0
chr17:75727485|75727749 hsa-miR-6846-5p 0 1 0
chr17:75727485|75727749 hsa-miR-6848-5p 1 1 0
chr17:75727485|75727749 hsa-miR-6858-5p 0 1 0
chr17:75727485|75727749 hsa-miR-1271-3p 0 1 0
chr17:75727485|75727749 hsa-miR-6724-5p 0 1 0
chr17:75727485|75727749 hsa-miR-10398-5p 0 1 0
chr17:75727485|75727749 hsa-miR-6753-3p 0 1 0
chr17:75727485|75727749 hsa-miR-6756-3p 0 1 0
chr17:75727485|75727749 hsa-miR-3130-5p 1 0 0
chr17:75727485|75727749 hsa-miR-3085-3p 0 1 0
chr17:75727485|75727749 hsa-miR-10394-5p 0 1 0
chr17:75727485|75727749 hsa-miR-1295b-5p 0 1 0
chr17:75727485|75727749 hsa-miR-514b-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:75727485|75727749
ORF Type ORF1
Protein Length 79
Nucleotide Length 240
Protein Sequence MPLLTGPQTDPQALGGHLAAPQGGVNLGLLQPVEGDSWLEGHSGGPMGAQPGQGALYTPINSQAEHGEPPPQSPHQAPL
Nucleotide Sequence ATGCCGCTCCTCACCGGGCCGCAGACGGACCCGCAGGCCTTGGGGGGACATCTGGCTGCGCCGCAGGGTGGTGTCAATCTGGGTCTCCTGCAGCCAGTGGAAGGGGACAGCTGGCTAGAGGGTCACTCCGGAGGCCCGATGGGGGCCCAGCCCGGCCAAGGGGCACTATACACCCCCATAAATAGCCAGGCTGAGCATGGGGAGCCCCCACCCCAGTCCCCACACCAGGCACCTCTGTGA
CircID chr17:75727485|75727749
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MQETQIDTTLRRSQMSPQGLRVRLRPGEERHFELE
Nucleotide Sequence CTGCAGGAGACCCAGATTGACACCACCCTGCGGCGCAGCCAGATGTCCCCCCAAGGCCTGCGGGTCCGTCTGCGGCCCGGTGAGGAGCGGCATTTTGAGCTGGAG
CircID chr17:75727485|75727749
ORF Type ORF3
Protein Length 40
Nucleotide Length 120
Protein Sequence MSPSTGCRRPRLTPPCGAARCPPKACGSVCGPVRSGILSW
Nucleotide Sequence CTGTCCCCTTCCACTGGCTGCAGGAGACCCAGATTGACACCACCCTGCGGCGCAGCCAGATGTCCCCCCAAGGCCTGCGGGTCCGTCTGCGGCCCGGTGAGGAGCGGCATTTTGAGCTGG
CircID chr17:75727485|75727749
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MPLLTGPQTDPQALGGHLAAPQGGVNLGLLCDLEAA
Nucleotide Sequence ATGCCGCTCCTCACCGGGCCGCAGACGGACCCGCAGGCCTTGGGGGGACATCTGGCTGCGCCGCAGGGTGGTGTCAATCTGGGTCTCCTCTGTGATTTGGAAGCTGCT
CircID chr17:75727485|75727749
ORF Type ORF2
Protein Length 26
Nucleotide Length 78
Protein Sequence MRRSQMSPQGLRVRLRPGEERHFELE
Nucleotide Sequence CTGCGGCGCAGCCAGATGTCCCCCCAAGGCCTGCGGGTCCGTCTGCGGCCCGGTGAGGAGCGGCATTTTGAGCTGGAG
CircID chr17:75727485|75727749
ORF Type ORF3
Protein Length 29
Nucleotide Length 87
Protein Sequence MTPPCGAARCPPKACGSVCGPVRSGILSW
Nucleotide Sequence TTGACACCACCCTGCGGCGCAGCCAGATGTCCCCCCAAGGCCTGCGGGTCCGTCTGCGGCCCGGTGAGGAGCGGCATTTTGAGCTGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab