CircRNA Information

General Information
circRNA Basic Information
CircID chr17:75730241|75730504
Strand +
CircType exon
Host Gene ENSG00000132470.12;
Algorism CIRI2;
Sequence CTCGTAGTAGCTATAGGAGTAGTTGGTGACAGCAAAGATGGGGATGATGTTGTGCTTGGCGAGCAGGCGCACCAGGGTGGGCACCGACGGGTAGTCCTGTGTCCTGTACTGGGTGTAGGTGCCCGTGGTGTCCAGGTGGCACCGTTCATCGTTGCGGCTCATGATGCCAGCCAGCACGTTGGCGCCATCAGCCTCATAGTGGAAGGCTGACTCGGTGGAGAAGACCAGCAGGTGGGTGCTGTCCGGGCGCCAGCCAATGTCCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:75730241|75730504 hsa-miR-99a-5p 0 0 1
chr17:75730241|75730504 hsa-miR-99a-3p 0 0 1
chr17:75730241|75730504 hsa-miR-100-5p 0 0 1
chr17:75730241|75730504 hsa-miR-100-3p 0 0 1
chr17:75730241|75730504 hsa-miR-99b-5p 0 0 1
chr17:75730241|75730504 hsa-miR-99b-3p 0 0 1
chr17:75730241|75730504 hsa-miR-370-5p 0 0 1
chr17:75730241|75730504 hsa-miR-370-3p 0 0 1
chr17:75730241|75730504 hsa-miR-606 0 0 1
chr17:75730241|75730504 hsa-miR-619-5p 0 0 1
chr17:75730241|75730504 hsa-miR-619-3p 0 0 1
chr17:75730241|75730504 hsa-miR-626 0 0 1
chr17:75730241|75730504 hsa-miR-647 0 0 1
chr17:75730241|75730504 hsa-miR-652-5p 0 0 1
chr17:75730241|75730504 hsa-miR-652-3p 0 0 1
chr17:75730241|75730504 hsa-miR-675-5p 0 0 1
chr17:75730241|75730504 hsa-miR-675-3p 0 0 1
chr17:75730241|75730504 hsa-miR-891a-5p 0 0 1
chr17:75730241|75730504 hsa-miR-891a-3p 0 0 1
chr17:75730241|75730504 hsa-miR-887-5p 0 0 1
chr17:75730241|75730504 hsa-miR-887-3p 0 0 1
chr17:75730241|75730504 hsa-miR-942-5p 0 0 1
chr17:75730241|75730504 hsa-miR-942-3p 0 0 1
chr17:75730241|75730504 hsa-miR-1227-5p 0 0 1
chr17:75730241|75730504 hsa-miR-1227-3p 0 0 1
chr17:75730241|75730504 hsa-miR-1250-5p 0 0 1
chr17:75730241|75730504 hsa-miR-1250-3p 0 0 1
chr17:75730241|75730504 hsa-miR-1197 0 0 1
chr17:75730241|75730504 hsa-miR-770-5p 0 0 1
chr17:75730241|75730504 hsa-miR-485-5p 0 0 1
chr17:75730241|75730504 hsa-miR-566 0 0 1
chr17:75730241|75730504 hsa-miR-1224-3p 0 0 1
chr17:75730241|75730504 hsa-miR-337-3p 0 0 1
chr17:75730241|75730504 hsa-miR-515-5p 0 0 1
chr17:75730241|75730504 hsa-miR-138 0 0 1
chr17:75730241|75730504 hsa-miR-4252 1 0 0
chr17:75730241|75730504 hsa-miR-4505 1 0 0
chr17:75730241|75730504 hsa-miR-3973 1 0 0
chr17:75730241|75730504 hsa-miR-4665-3p 1 0 0
chr17:75730241|75730504 hsa-miR-6842-3p 1 0 0
chr17:75730241|75730504 hsa-miR-2277-3p 1 0 0
chr17:75730241|75730504 hsa-miR-6870-3p 1 0 0
chr17:75730241|75730504 hsa-miR-6871-3p 1 0 0
chr17:75730241|75730504 hsa-miR-196b-3p 1 0 0
chr17:75730241|75730504 hsa-miR-1271-3p 1 0 0
chr17:75730241|75730504 hsa-miR-6810-3p 1 0 0
chr17:75730241|75730504 hsa-miR-7114-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr17:75730241|75730504
ORF Type ORF1
Protein Length 37
Nucleotide Length 114
Protein Sequence MCPVLGVGARGVQVAPFIVAAHDASQHVGAISLIVEG
Nucleotide Sequence CTGTGTCCTGTACTGGGTGTAGGTGCCCGTGGTGTCCAGGTGGCACCGTTCATCGTTGCGGCTCATGATGCCAGCCAGCACGTTGGCGCCATCAGCCTCATAGTGGAAGGCTGA

CircID chr17:75730241|75730504
ORF Type ORF2
Protein Length 77
Nucleotide Length 231
Protein Sequence MLVFSTESAFHYEADGANVLAGIMSRNDERCHLDTTGTYTQYRTQDYPSVPTLVRLLAKHNIIPIFAVTNYSYSYYE
Nucleotide Sequence CTGCTGGTCTTCTCCACCGAGTCAGCCTTCCACTATGAGGCTGATGGCGCCAACGTGCTGGCTGGCATCATGAGCCGCAACGATGAACGGTGCCACCTGGACACCACGGGCACCTACACCCAGTACAGGACACAGGACTACCCGTCGGTGCCCACCCTGGTGCGCCTGCTCGCCAAGCACAACATCATCCCCATCTTTGCTGTCACCAACTACTCCTATAGCTACTACGAG

CircID chr17:75730241|75730504
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MAGARTAPTCWSSPPSQPSTMRLMAPTCWLAS
Nucleotide Sequence TTGGCTGGCGCCCGGACAGCACCCACCTGCTGGTCTTCTCCACCGAGTCAGCCTTCCACTATGAGGCTGATGGCGCCAACGTGCTGGCTGGCATCATGA

CircID chr17:75730241|75730504
ORF Type ORF4
Protein Length 49
Nucleotide Length 147
Protein Sequence MNGATWTPRAPTPSTGHRTTRRCPPWCACSPSTTSSPSLLSPTTPIATT
Nucleotide Sequence ATGAACGGTGCCACCTGGACACCACGGGCACCTACACCCAGTACAGGACACAGGACTACCCGTCGGTGCCCACCCTGGTGCGCCTGCTCGCCAAGCACAACATCATCCCCATCTTTGCTGTCACCAACTACTCCTATAGCTACTACG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites