CircRNA Information

General Information
circRNA Basic Information
CircID chr17:75756359|75756583
Strand +
CircType exon
Host Gene ENSG00000132470.12;
Algorism CIRI2;
Sequence CTGGGATTCAATGGTGATGACACCCTCACGCTCTCGGCCCCAGCCTTCCTGGCTCTGGGCCCGCACGCGGAACACGTAGGAGTGGTTGGGCAGGAGGTCTTCCACCACCACCGAGGTCTGGGCAGGGTTGGGGATGTTGAGCCGATGCAGCTCACCTGGGGGGATCAGGTGGGGGCACACAGTAGTGCAGTGTTACTCCCACCCCTGGCCTGATCCTCCTCGTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:75756359|75756583 hsa-miR-141-5p 0 0 1
chr17:75756359|75756583 hsa-miR-141-3p 0 0 1
chr17:75756359|75756583 hsa-miR-200a-5p 0 0 1
chr17:75756359|75756583 hsa-miR-200a-3p 0 0 1
chr17:75756359|75756583 hsa-miR-558 0 0 1
chr17:75756359|75756583 hsa-miR-608 0 1 1
chr17:75756359|75756583 hsa-miR-802 0 0 1
chr17:75756359|75756583 hsa-miR-892a 0 1 1
chr17:75756359|75756583 hsa-miR-937-5p 0 0 1
chr17:75756359|75756583 hsa-miR-937-3p 0 0 1
chr17:75756359|75756583 hsa-miR-125a-3p 0 1 1
chr17:75756359|75756583 hsa-miR-361-3p 0 1 1
chr17:75756359|75756583 hsa-miR-1224-3p 0 1 1
chr17:75756359|75756583 hsa-miR-876-3p 0 0 1
chr17:75756359|75756583 hsa-miR-483-3p 0 0 1
chr17:75756359|75756583 hsa-miR-151-5p 0 0 1
chr17:75756359|75756583 hsa-miR-323-5p 0 0 1
chr17:75756359|75756583 hsa-miR-7 0 0 1
chr17:75756359|75756583 hsa-miR-596 1 0 0
chr17:75756359|75756583 hsa-miR-762 1 1 0
chr17:75756359|75756583 hsa-miR-665 0 1 0
chr17:75756359|75756583 hsa-miR-1203 0 1 0
chr17:75756359|75756583 hsa-miR-1471 1 1 0
chr17:75756359|75756583 hsa-miR-1976 0 1 0
chr17:75756359|75756583 hsa-miR-4322 0 1 0
chr17:75756359|75756583 hsa-miR-4505 0 1 0
chr17:75756359|75756583 hsa-miR-4642 1 0 0
chr17:75756359|75756583 hsa-miR-4656 1 1 0
chr17:75756359|75756583 hsa-miR-5787 1 1 0
chr17:75756359|75756583 hsa-miR-7703 1 0 0
chr17:75756359|75756583 hsa-miR-9986 1 0 0
chr17:75756359|75756583 hsa-miR-4731-5p 0 1 0
chr17:75756359|75756583 hsa-miR-6894-5p 0 1 0
chr17:75756359|75756583 hsa-miR-1972 0 1 0
chr17:75756359|75756583 hsa-miR-6804-5p 1 1 0
chr17:75756359|75756583 hsa-miR-505-5p 0 1 0
chr17:75756359|75756583 hsa-miR-296-5p 1 0 0
chr17:75756359|75756583 hsa-miR-3190-3p 0 1 0
chr17:75756359|75756583 hsa-miR-6782-5p 0 1 0
chr17:75756359|75756583 hsa-miR-3194-5p 1 0 0
chr17:75756359|75756583 hsa-miR-6882-3p 1 0 0
chr17:75756359|75756583 hsa-miR-4436b-5p 1 0 0
chr17:75756359|75756583 hsa-miR-4763-5p 1 1 0
chr17:75756359|75756583 hsa-miR-4640-5p 0 1 0
chr17:75756359|75756583 hsa-miR-6749-5p 0 1 0
chr17:75756359|75756583 hsa-miR-4787-5p 1 0 0
chr17:75756359|75756583 hsa-miR-6877-5p 0 1 0
chr17:75756359|75756583 hsa-miR-6793-3p 1 1 0
chr17:75756359|75756583 hsa-miR-6752-3p 0 1 0
chr17:75756359|75756583 hsa-miR-7158-5p 0 1 0
chr17:75756359|75756583 hsa-miR-6732-3p 0 1 0
chr17:75756359|75756583 hsa-miR-1207-5p 1 0 0
chr17:75756359|75756583 hsa-miR-1233-5p 1 1 0
chr17:75756359|75756583 hsa-miR-4763-3p 1 0 0
chr17:75756359|75756583 hsa-miR-6752-5p 1 0 0
chr17:75756359|75756583 hsa-miR-6754-5p 0 1 0
chr17:75756359|75756583 hsa-miR-6756-5p 1 1 0
chr17:75756359|75756583 hsa-miR-1909-3p 1 0 0
chr17:75756359|75756583 hsa-miR-4685-5p 1 1 0
chr17:75756359|75756583 hsa-miR-4726-5p 0 1 0
chr17:75756359|75756583 hsa-miR-6777-5p 0 1 0
chr17:75756359|75756583 hsa-miR-6858-5p 0 1 0
chr17:75756359|75756583 hsa-miR-6889-5p 0 1 0
chr17:75756359|75756583 hsa-miR-6766-5p 0 1 0
chr17:75756359|75756583 hsa-miR-4722-3p 1 0 0
chr17:75756359|75756583 hsa-miR-6727-3p 1 0 0
chr17:75756359|75756583 hsa-miR-6805-3p 1 0 0
chr17:75756359|75756583 hsa-miR-6837-5p 0 1 0
chr17:75756359|75756583 hsa-miR-3622a-3p 0 1 0
chr17:75756359|75756583 hsa-miR-3622b-3p 0 1 0
chr17:75756359|75756583 hsa-miR-6807-3p 0 1 0
chr17:75756359|75756583 hsa-miR-6503-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:75756359|75756583
ORF Type ORF1
Protein Length 70
Nucleotide Length 213
Protein Sequence LGFNGDDTLTLSAPAFLALGPHAEHVGVVGQEVFHHHRGLGRVGDVEPMQLTWGDQVGAHSSAVLLPPLA
Nucleotide Sequence CTGGGATTCAATGGTGATGACACCCTCACGCTCTCGGCCCCAGCCTTCCTGGCTCTGGGCCCGCACGCGGAACACGTAGGAGTGGTTGGGCAGGAGGTCTTCCACCACCACCGAGGTCTGGGCAGGGTTGGGGATGTTGAGCCGATGCAGCTCACCTGGGGGGATCAGGTGGGGGCACACAGTAGTGCAGTGTTACTCCCACCCCTGGCCTGA
CircID chr17:75756359|75756583
ORF Type ORF2
Protein Length 46
Nucleotide Length 138
Protein Sequence MGRRSSTTTEVWAGLGMLSRCSSPGGIRWGHTVVQCYSHPWPDPPR
Nucleotide Sequence TTGGGCAGGAGGTCTTCCACCACCACCGAGGTCTGGGCAGGGTTGGGGATGTTGAGCCGATGCAGCTCACCTGGGGGGATCAGGTGGGGGCACACAGTAGTGCAGTGTTACTCCCACCCCTGGCCTGATCCTCCTCGT
CircID chr17:75756359|75756583
ORF Type ORF3
Protein Length 56
Nucleotide Length 168
Protein Sequence MIPPGELHRLNIPNPAQTSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQ
Nucleotide Sequence CTGATCCCCCCAGGTGAGCTGCATCGGCTCAACATCCCCAACCCTGCCCAGACCTCGGTGGTGGTGGAAGACCTCCTGCCCAACCACTCCTACGTGTTCCGCGTGCGGGCCCAGAGCCAGGAAGGCTGGGGCCGAGAGCGTGAGGGTGTCATCACCATTGAATCCCAG
CircID chr17:75756359|75756583
ORF Type ORF4
Protein Length 41
Nucleotide Length 123
Protein Sequence MPRPRWWWKTSCPTTPTCSACGPRARKAGAESVRVSSPLNP
Nucleotide Sequence CTGCCCAGACCTCGGTGGTGGTGGAAGACCTCCTGCCCAACCACTCCTACGTGTTCCGCGTGCGGGCCCAGAGCCAGGAAGGCTGGGGCCGAGAGCGTGAGGGTGTCATCACCATTGAATCCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab