CircRNA Information

General Information
circRNA Basic Information
CircID chr17:7578684|7578893
Strand +
CircType exon
Host Gene ENSG00000277957.1;
Algorism CIRI2;
Sequence CTGGGGACAACCCCCTGGGCAACCTCACTTAGGGGTTTTAGGGGTTCTCCCTCCAGATTTGGTCCAGCAAATGAGGCTGAGTGACATAGTCCCTTGAATCACTTTCAAAGGAGCTCAGCTGAGGTGAGGAGAGCCTCTGGGATCTGGAGGTTACTAGGTTAGGGAAATGGATTAGTGTTTTTTTTTTTTTTTTGGGAGAAGAGCCGGCGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:7578684|7578893 hsa-miR-150-5p 0 0 1
chr17:7578684|7578893 hsa-miR-150-3p 0 0 1
chr17:7578684|7578893 hsa-miR-488-5p 0 0 1
chr17:7578684|7578893 hsa-miR-488-3p 0 0 1
chr17:7578684|7578893 hsa-miR-579-5p 0 0 1
chr17:7578684|7578893 hsa-miR-579-3p 0 0 1
chr17:7578684|7578893 hsa-miR-589-5p 0 0 1
chr17:7578684|7578893 hsa-miR-589-3p 0 0 1
chr17:7578684|7578893 hsa-miR-668-5p 0 0 1
chr17:7578684|7578893 hsa-miR-668-3p 0 0 1
chr17:7578684|7578893 hsa-miR-802 0 0 1
chr17:7578684|7578893 hsa-miR-942-5p 0 0 1
chr17:7578684|7578893 hsa-miR-942-3p 0 0 1
chr17:7578684|7578893 hsa-miR-1287-5p 0 0 1
chr17:7578684|7578893 hsa-miR-1287-3p 0 0 1
chr17:7578684|7578893 hsa-miR-1294 0 1 1
chr17:7578684|7578893 hsa-miR-512-5p 0 1 1
chr17:7578684|7578893 hsa-miR-532-3p 0 0 1
chr17:7578684|7578893 hsa-miR-628-3p 0 0 1
chr17:7578684|7578893 hsa-miR-1207-3p 0 0 1
chr17:7578684|7578893 hsa-miR-516b 0 0 1
chr17:7578684|7578893 hsa-miR-453 0 0 1
chr17:7578684|7578893 hsa-miR-4475 0 1 0
chr17:7578684|7578893 hsa-miR-4663 0 1 0
chr17:7578684|7578893 hsa-miR-5100 1 1 0
chr17:7578684|7578893 hsa-miR-6086 0 1 0
chr17:7578684|7578893 hsa-miR-8062 0 1 0
chr17:7578684|7578893 hsa-miR-9986 0 1 0
chr17:7578684|7578893 hsa-miR-766-3p 1 0 0
chr17:7578684|7578893 hsa-miR-6787-3p 0 1 0
chr17:7578684|7578893 hsa-miR-6845-3p 0 1 0
chr17:7578684|7578893 hsa-miR-656-5p 0 1 0
chr17:7578684|7578893 hsa-miR-2467-5p 1 1 0
chr17:7578684|7578893 hsa-miR-7109-5p 1 0 0
chr17:7578684|7578893 hsa-miR-6803-3p 1 0 0
chr17:7578684|7578893 hsa-miR-6878-5p 0 1 0
chr17:7578684|7578893 hsa-miR-339-5p 1 0 0
chr17:7578684|7578893 hsa-miR-516b-5p 0 1 0
chr17:7578684|7578893 hsa-miR-4776-5p 0 1 0
chr17:7578684|7578893 hsa-miR-4732-3p 1 0 0
chr17:7578684|7578893 hsa-miR-3180-5p 0 1 0
chr17:7578684|7578893 hsa-miR-6741-3p 0 1 0
chr17:7578684|7578893 hsa-miR-518c-5p 0 1 0
chr17:7578684|7578893 hsa-miR-3124-3p 0 1 0
chr17:7578684|7578893 hsa-miR-5195-5p 0 1 0
chr17:7578684|7578893 hsa-miR-4762-5p 0 1 0
chr17:7578684|7578893 hsa-miR-1249-5p 0 1 0
chr17:7578684|7578893 hsa-miR-6797-5p 0 1 0
chr17:7578684|7578893 hsa-miR-377-5p 0 1 0
chr17:7578684|7578893 hsa-miR-6764-5p 0 1 0
chr17:7578684|7578893 hsa-miR-494-5p 0 1 0
chr17:7578684|7578893 hsa-miR-6835-3p 0 1 0
chr17:7578684|7578893 hsa-miR-664a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:7578684|7578893
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence LGTTPWATSLRGFRGSPSRFGPANEAE
Nucleotide Sequence CTGGGGACAACCCCCTGGGCAACCTCACTTAGGGGTTTTAGGGGTTCTCCCTCCAGATTTGGTCCAGCAAATGAGGCTGAGTGA

CircID chr17:7578684|7578893
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MKVIQGTMSLSLICWTKSGGRTPKTPK
Nucleotide Sequence TTGAAAGTGATTCAAGGGACTATGTCACTCAGCCTCATTTGCTGGACCAAATCTGGAGGGAGAACCCCTAAAACCCCTAAGTGA

CircID chr17:7578684|7578893
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MSSFESDSRDYVTQPHLLDQIWRENP
Nucleotide Sequence CTGAGCTCCTTTGAAAGTGATTCAAGGGACTATGTCACTCAGCCTCATTTGCTGGACCAAATCTGGAGGGAGAACCCCTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites