CircRNA Information

General Information
circRNA Basic Information
CircID chr17:7580009|7580273
Strand -
CircType exon
Host Gene ENSG00000264772.4;
Algorism CIRI2;
Sequence CACCAGCCATGGAAACGTCACAGTTCATCCAACAAGCAATAGCACTGCCACCAGCCAGGGACCCTCAACTGCCACTCACAGTCCTGCCACCACTAGTCATGGAAATGCCACGGTTCATCCAACAAGCAACAGCACTGCCACCAGCCCAGGATTCACCAGTTCTGCCCACCCAGAACCACCTCCACCCTCTCCGAGTCCTAGCCCAACCTCCAAGGAGACCATTGGAGACTACACGTGGACCAATGGTTCCCAGCCCTGTGTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:7580009|7580273 hsa-miR-34a-5p 0 0 1
chr17:7580009|7580273 hsa-miR-34a-3p 0 0 1
chr17:7580009|7580273 hsa-miR-137-5p 0 0 1
chr17:7580009|7580273 hsa-miR-137-3p 0 0 1
chr17:7580009|7580273 hsa-miR-133b 0 0 1
chr17:7580009|7580273 hsa-miR-449a 1 1 1
chr17:7580009|7580273 hsa-miR-432-5p 0 0 1
chr17:7580009|7580273 hsa-miR-432-3p 0 0 1
chr17:7580009|7580273 hsa-miR-587 0 0 1
chr17:7580009|7580273 hsa-miR-449b-5p 0 0 1
chr17:7580009|7580273 hsa-miR-449b-3p 0 0 1
chr17:7580009|7580273 hsa-miR-541-5p 0 0 1
chr17:7580009|7580273 hsa-miR-541-3p 0 0 1
chr17:7580009|7580273 hsa-miR-1286 1 0 1
chr17:7580009|7580273 hsa-miR-1293 0 0 1
chr17:7580009|7580273 hsa-miR-1255a 0 0 1
chr17:7580009|7580273 hsa-miR-1256 0 0 1
chr17:7580009|7580273 hsa-miR-1292-5p 0 0 1
chr17:7580009|7580273 hsa-miR-1292-3p 0 0 1
chr17:7580009|7580273 hsa-miR-140-5p 0 0 1
chr17:7580009|7580273 hsa-miR-512-3p 0 0 1
chr17:7580009|7580273 hsa-miR-654-5p 0 1 1
chr17:7580009|7580273 hsa-miR-876-3p 0 0 1
chr17:7580009|7580273 hsa-miR-1207-5p 1 0 1
chr17:7580009|7580273 hsa-miR-34c-5p 1 1 1
chr17:7580009|7580273 hsa-miR-582-3p 0 0 1
chr17:7580009|7580273 hsa-miR-515-5p 0 0 1
chr17:7580009|7580273 hsa-miR-1255b 0 0 1
chr17:7580009|7580273 hsa-miR-220c 0 0 1
chr17:7580009|7580273 hsa-miR-138 0 0 1
chr17:7580009|7580273 hsa-miR-768-5p 0 0 1
chr17:7580009|7580273 hsa-miR-133a 0 0 1
chr17:7580009|7580273 hsa-miR-601 1 0 0
chr17:7580009|7580273 hsa-miR-608 1 0 0
chr17:7580009|7580273 hsa-miR-612 1 1 0
chr17:7580009|7580273 hsa-miR-623 1 0 0
chr17:7580009|7580273 hsa-miR-663a 1 0 0
chr17:7580009|7580273 hsa-miR-762 1 1 0
chr17:7580009|7580273 hsa-miR-1182 1 0 0
chr17:7580009|7580273 hsa-miR-1183 1 0 0
chr17:7580009|7580273 hsa-miR-1258 1 0 0
chr17:7580009|7580273 hsa-miR-1268a 1 0 0
chr17:7580009|7580273 hsa-miR-3131 1 0 0
chr17:7580009|7580273 hsa-miR-3138 0 1 0
chr17:7580009|7580273 hsa-miR-3147 1 1 0
chr17:7580009|7580273 hsa-miR-3169 1 1 0
chr17:7580009|7580273 hsa-miR-3652 1 0 0
chr17:7580009|7580273 hsa-miR-3917 1 0 0
chr17:7580009|7580273 hsa-miR-1268b 1 0 0
chr17:7580009|7580273 hsa-miR-378g 0 1 0
chr17:7580009|7580273 hsa-miR-4448 1 0 0
chr17:7580009|7580273 hsa-miR-4462 1 0 0
chr17:7580009|7580273 hsa-miR-4467 1 0 0
chr17:7580009|7580273 hsa-miR-4481 1 0 0
chr17:7580009|7580273 hsa-miR-4488 1 0 0
chr17:7580009|7580273 hsa-miR-4489 1 0 0
chr17:7580009|7580273 hsa-miR-4492 1 1 0
chr17:7580009|7580273 hsa-miR-4498 1 1 0
chr17:7580009|7580273 hsa-miR-4505 1 0 0
chr17:7580009|7580273 hsa-miR-2392 1 0 0
chr17:7580009|7580273 hsa-miR-4507 1 0 0
chr17:7580009|7580273 hsa-miR-1587 1 1 0
chr17:7580009|7580273 hsa-miR-4642 1 0 0
chr17:7580009|7580273 hsa-miR-4651 1 0 0
chr17:7580009|7580273 hsa-miR-4656 1 0 0
chr17:7580009|7580273 hsa-miR-4674 1 0 0
chr17:7580009|7580273 hsa-miR-4675 1 0 0
chr17:7580009|7580273 hsa-miR-4688 1 0 0
chr17:7580009|7580273 hsa-miR-4706 1 0 0
chr17:7580009|7580273 hsa-miR-4710 1 0 0
chr17:7580009|7580273 hsa-miR-4721 1 0 0
chr17:7580009|7580273 hsa-miR-4739 1 0 0
chr17:7580009|7580273 hsa-miR-4741 1 0 0
chr17:7580009|7580273 hsa-miR-5192 1 0 0
chr17:7580009|7580273 hsa-miR-5739 0 1 0
chr17:7580009|7580273 hsa-miR-5787 1 1 0
chr17:7580009|7580273 hsa-miR-6086 1 1 0
chr17:7580009|7580273 hsa-miR-6127 1 0 0
chr17:7580009|7580273 hsa-miR-6132 1 1 0
chr17:7580009|7580273 hsa-miR-6133 1 0 0
chr17:7580009|7580273 hsa-miR-6745 1 1 0
chr17:7580009|7580273 hsa-miR-6860 1 0 0
chr17:7580009|7580273 hsa-miR-7150 1 0 0
chr17:7580009|7580273 hsa-miR-8052 1 0 0
chr17:7580009|7580273 hsa-miR-8068 0 1 0
chr17:7580009|7580273 hsa-miR-8072 1 0 0
chr17:7580009|7580273 hsa-miR-8075 1 0 0
chr17:7580009|7580273 hsa-miR-12114 1 0 0
chr17:7580009|7580273 hsa-miR-138-5p 1 1 0
chr17:7580009|7580273 hsa-miR-132-5p 0 1 0
chr17:7580009|7580273 hsa-miR-92a-1-5p 0 1 0
chr17:7580009|7580273 hsa-miR-6809-5p 1 0 0
chr17:7580009|7580273 hsa-miR-4433a-3p 1 0 0
chr17:7580009|7580273 hsa-miR-125b-1-3p 1 0 0
chr17:7580009|7580273 hsa-miR-6861-5p 1 0 0
chr17:7580009|7580273 hsa-miR-7106-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6825-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6894-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6857-5p 1 0 0
chr17:7580009|7580273 hsa-miR-4687-3p 1 0 0
chr17:7580009|7580273 hsa-miR-6799-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6728-5p 1 0 0
chr17:7580009|7580273 hsa-miR-8071 1 0 0
chr17:7580009|7580273 hsa-miR-6880-5p 1 0 0
chr17:7580009|7580273 hsa-miR-4722-5p 1 0 0
chr17:7580009|7580273 hsa-miR-3064-5p 1 1 0
chr17:7580009|7580273 hsa-miR-3677-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6842-3p 1 1 0
chr17:7580009|7580273 hsa-miR-6759-5p 1 1 0
chr17:7580009|7580273 hsa-miR-6721-5p 1 0 0
chr17:7580009|7580273 hsa-miR-23b-5p 1 1 0
chr17:7580009|7580273 hsa-miR-197-5p 1 0 0
chr17:7580009|7580273 hsa-miR-1288-3p 1 0 0
chr17:7580009|7580273 hsa-miR-659-3p 0 1 0
chr17:7580009|7580273 hsa-miR-3180-3p 1 0 0
chr17:7580009|7580273 hsa-miR-6748-5p 1 1 0
chr17:7580009|7580273 hsa-miR-6772-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6793-5p 1 0 0
chr17:7580009|7580273 hsa-miR-203b-3p 0 1 0
chr17:7580009|7580273 hsa-miR-6732-5p 1 0 0
chr17:7580009|7580273 hsa-miR-23a-5p 1 0 0
chr17:7580009|7580273 hsa-miR-1224-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6782-5p 1 0 0
chr17:7580009|7580273 hsa-miR-615-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6786-5p 1 0 0
chr17:7580009|7580273 hsa-miR-5088-5p 1 1 0
chr17:7580009|7580273 hsa-miR-1226-5p 1 0 0
chr17:7580009|7580273 hsa-miR-1229-5p 1 0 0
chr17:7580009|7580273 hsa-miR-4640-5p 1 0 0
chr17:7580009|7580273 hsa-miR-3127-5p 1 0 0
chr17:7580009|7580273 hsa-miR-1908-5p 1 0 0
chr17:7580009|7580273 hsa-miR-1228-5p 1 0 0
chr17:7580009|7580273 hsa-miR-296-3p 1 0 0
chr17:7580009|7580273 hsa-miR-6749-5p 1 0 0
chr17:7580009|7580273 hsa-miR-4787-5p 1 0 0
chr17:7580009|7580273 hsa-miR-4446-3p 1 1 0
chr17:7580009|7580273 hsa-miR-149-3p 1 0 0
chr17:7580009|7580273 hsa-miR-664b-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6869-5p 1 0 0
chr17:7580009|7580273 hsa-miR-4746-3p 1 0 0
chr17:7580009|7580273 hsa-miR-891a-3p 1 0 0
chr17:7580009|7580273 hsa-miR-10400-5p 1 0 0
chr17:7580009|7580273 hsa-miR-1233-5p 1 0 0
chr17:7580009|7580273 hsa-miR-4763-3p 1 0 0
chr17:7580009|7580273 hsa-miR-6769b-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6778-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6787-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6816-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6865-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6775-5p 1 0 0
chr17:7580009|7580273 hsa-miR-5001-5p 1 1 0
chr17:7580009|7580273 hsa-miR-6737-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6752-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6756-5p 1 1 0
chr17:7580009|7580273 hsa-miR-6803-5p 1 1 0
chr17:7580009|7580273 hsa-miR-6813-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6819-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6851-5p 1 1 0
chr17:7580009|7580273 hsa-miR-7110-5p 1 0 0
chr17:7580009|7580273 hsa-miR-1249-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6722-3p 1 0 0
chr17:7580009|7580273 hsa-miR-6751-5p 1 1 0
chr17:7580009|7580273 hsa-miR-6779-5p 1 0 0
chr17:7580009|7580273 hsa-miR-3620-5p 1 1 0
chr17:7580009|7580273 hsa-miR-4728-5p 1 0 0
chr17:7580009|7580273 hsa-miR-5189-5p 1 0 0
chr17:7580009|7580273 hsa-miR-5196-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6836-5p 1 0 0
chr17:7580009|7580273 hsa-miR-10396b-5p 1 0 0
chr17:7580009|7580273 hsa-miR-1237-5p 1 0 0
chr17:7580009|7580273 hsa-miR-328-5p 1 0 0
chr17:7580009|7580273 hsa-miR-449c-5p 1 1 0
chr17:7580009|7580273 hsa-miR-4649-5p 1 0 0
chr17:7580009|7580273 hsa-miR-4685-5p 1 0 0
chr17:7580009|7580273 hsa-miR-4745-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6729-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6777-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6795-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6848-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6883-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6887-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6889-5p 1 0 0
chr17:7580009|7580273 hsa-miR-3187-5p 1 0 0
chr17:7580009|7580273 hsa-miR-4758-5p 1 1 0
chr17:7580009|7580273 hsa-miR-34b-5p 1 0 0
chr17:7580009|7580273 hsa-miR-365a-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6511a-5p 1 0 0
chr17:7580009|7580273 hsa-miR-3940-5p 1 0 0
chr17:7580009|7580273 hsa-miR-7843-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6736-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6766-5p 0 1 0
chr17:7580009|7580273 hsa-miR-6785-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6791-5p 1 0 0
chr17:7580009|7580273 hsa-miR-9851-5p 1 0 0
chr17:7580009|7580273 hsa-miR-10400-3p 1 0 0
chr17:7580009|7580273 hsa-miR-6783-3p 0 1 0
chr17:7580009|7580273 hsa-miR-6848-3p 0 1 0
chr17:7580009|7580273 hsa-miR-6504-5p 0 1 0
chr17:7580009|7580273 hsa-miR-2682-5p 1 0 0
chr17:7580009|7580273 hsa-miR-6843-3p 0 1 0
chr17:7580009|7580273 hsa-miR-146b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:7580009|7580273
ORF Type ORF1
Protein Length 85
Nucleotide Length 255
Protein Sequence METSQFIQQAIALPPARDPQLPLTVLPPLVMEMPRFIQQATALPPAQDSPVLPTQNHLHPLRVLAQPPRRPLETTRGPMVPSPVS
Nucleotide Sequence ATGGAAACGTCACAGTTCATCCAACAAGCAATAGCACTGCCACCAGCCAGGGACCCTCAACTGCCACTCACAGTCCTGCCACCACTAGTCATGGAAATGCCACGGTTCATCCAACAAGCAACAGCACTGCCACCAGCCCAGGATTCACCAGTTCTGCCCACCCAGAACCACCTCCACCCTCTCCGAGTCCTAGCCCAACCTCCAAGGAGACCATTGGAGACTACACGTGGACCAATGGTTCCCAGCCCTGTGTCC
CircID chr17:7580009|7580273
ORF Type ORF2
Protein Length 62
Nucleotide Length 189
Protein Sequence MGTIGPRVVSNGLLGGWARTRRGWRWFWVGRTGESWAGGSAVACWMNRGISMTSGGRTVSGS
Nucleotide Sequence CTGGGAACCATTGGTCCACGTGTAGTCTCCAATGGTCTCCTTGGAGGTTGGGCTAGGACTCGGAGAGGGTGGAGGTGGTTCTGGGTGGGCAGAACTGGTGAATCCTGGGCTGGTGGCAGTGCTGTTGCTTGTTGGATGAACCGTGGCATTTCCATGACTAGTGGTGGCAGGACTGTGAGTGGCAGTTGA
CircID chr17:7580009|7580273
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence MVSLEVGLGLGEGGGGSGWAELVNPGLVAVLLLVG
Nucleotide Sequence ATGGTCTCCTTGGAGGTTGGGCTAGGACTCGGAGAGGGTGGAGGTGGTTCTGGGTGGGCAGAACTGGTGAATCCTGGGCTGGTGGCAGTGCTGTTGCTTGTTGGATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab