CircRNA Information

General Information
circRNA Basic Information
CircID chr17:75833016|75834447
Strand -
CircType exon
Host Gene ENSG00000092929.10;
Algorism CIRI2;
Sequence CTCCAGGAACTTCATCAGGGGCAGAATGGCATCCTCAGGCAGGACAGACTCCCTGACGCCCACCAGTTTCTGGATGTGCTTGGCGATGCCCACCTCCAACTGGAGACACAAAACGGAAGAAGGAGGGAGGTCAGGGCATGAGTCGGGGATGGAAGAGTTCCTTAGGGCCTGAGTTTAGACGCACGAAGGGGTCAGGGTTGGACCTTGGCCCAGGTGCTGCTGGAGCCAGGTAGGCTGAAGACGGGATGGGATGGGGTGACTGTGCGGTCGGACAAGGTACCTGCTCGGCCAGGGTGCGGACGCCAGTGCGGATCTCATGGCCCAGCCCGGCCAGCGCGCTCTGCAGCTGGGCATGCAGCGTGTTCTGCAGCTGCCCCTGCTCCAGCACGGCCCCTACCCGCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:75833016|75834447 hsa-miR-15a-5p 0 0 1
chr17:75833016|75834447 hsa-miR-15a-3p 0 0 1
chr17:75833016|75834447 hsa-miR-15b-5p 0 0 1
chr17:75833016|75834447 hsa-miR-15b-3p 0 0 1
chr17:75833016|75834447 hsa-miR-149-5p 0 0 1
chr17:75833016|75834447 hsa-miR-149-3p 0 0 1
chr17:75833016|75834447 hsa-miR-195-5p 0 0 1
chr17:75833016|75834447 hsa-miR-195-3p 0 0 1
chr17:75833016|75834447 hsa-miR-424-5p 0 0 1
chr17:75833016|75834447 hsa-miR-424-3p 0 0 1
chr17:75833016|75834447 hsa-miR-497-5p 0 0 1
chr17:75833016|75834447 hsa-miR-497-3p 0 0 1
chr17:75833016|75834447 hsa-miR-517-5p 0 0 1
chr17:75833016|75834447 hsa-miR-517a-3p 0 0 1
chr17:75833016|75834447 hsa-miR-517c-3p 0 0 1
chr17:75833016|75834447 hsa-miR-510-5p 0 0 1
chr17:75833016|75834447 hsa-miR-510-3p 0 0 1
chr17:75833016|75834447 hsa-miR-585-5p 0 0 1
chr17:75833016|75834447 hsa-miR-585-3p 0 0 1
chr17:75833016|75834447 hsa-miR-592 0 0 1
chr17:75833016|75834447 hsa-miR-599 0 0 1
chr17:75833016|75834447 hsa-miR-619-5p 0 0 1
chr17:75833016|75834447 hsa-miR-619-3p 0 0 1
chr17:75833016|75834447 hsa-miR-766-5p 0 0 1
chr17:75833016|75834447 hsa-miR-766-3p 0 0 1
chr17:75833016|75834447 hsa-miR-298 0 0 1
chr17:75833016|75834447 hsa-miR-874-5p 0 0 1
chr17:75833016|75834447 hsa-miR-874-3p 0 0 1
chr17:75833016|75834447 hsa-miR-541-5p 0 0 1
chr17:75833016|75834447 hsa-miR-541-3p 0 0 1
chr17:75833016|75834447 hsa-miR-1236-5p 0 0 1
chr17:75833016|75834447 hsa-miR-1236-3p 0 0 1
chr17:75833016|75834447 hsa-miR-1237-5p 0 0 1
chr17:75833016|75834447 hsa-miR-1237-3p 0 0 1
chr17:75833016|75834447 hsa-miR-1287-5p 0 0 1
chr17:75833016|75834447 hsa-miR-1287-3p 0 0 1
chr17:75833016|75834447 hsa-miR-1247-5p 0 0 1
chr17:75833016|75834447 hsa-miR-1247-3p 0 0 1
chr17:75833016|75834447 hsa-miR-1248 0 0 1
chr17:75833016|75834447 hsa-miR-145-5p 0 0 1
chr17:75833016|75834447 hsa-miR-486-3p 1 1 1
chr17:75833016|75834447 hsa-miR-146b-3p 0 0 1
chr17:75833016|75834447 hsa-miR-654-5p 0 1 1
chr17:75833016|75834447 hsa-miR-338-3p 0 0 1
chr17:75833016|75834447 hsa-miR-324-3p 0 0 1
chr17:75833016|75834447 hsa-miR-582-3p 0 0 1
chr17:75833016|75834447 hsa-miR-16 0 0 1
chr17:75833016|75834447 hsa-miR-1268 0 0 1
chr17:75833016|75834447 hsa-miR-768-5p 0 0 1
chr17:75833016|75834447 hsa-miR-1201 0 0 1
chr17:75833016|75834447 hsa-miR-1185 0 0 1
chr17:75833016|75834447 hsa-miR-484 1 0 0
chr17:75833016|75834447 hsa-miR-596 1 1 0
chr17:75833016|75834447 hsa-miR-608 1 0 0
chr17:75833016|75834447 hsa-miR-612 1 0 0
chr17:75833016|75834447 hsa-miR-663a 1 0 0
chr17:75833016|75834447 hsa-miR-762 1 1 0
chr17:75833016|75834447 hsa-miR-1291 1 0 0
chr17:75833016|75834447 hsa-miR-544b 0 1 0
chr17:75833016|75834447 hsa-miR-4270 0 1 0
chr17:75833016|75834447 hsa-miR-3621 1 0 0
chr17:75833016|75834447 hsa-miR-3135b 0 1 0
chr17:75833016|75834447 hsa-miR-4492 1 1 0
chr17:75833016|75834447 hsa-miR-4505 1 1 0
chr17:75833016|75834447 hsa-miR-4521 0 1 0
chr17:75833016|75834447 hsa-miR-1587 1 0 0
chr17:75833016|75834447 hsa-miR-4656 1 0 0
chr17:75833016|75834447 hsa-miR-4675 0 1 0
chr17:75833016|75834447 hsa-miR-4688 0 1 0
chr17:75833016|75834447 hsa-miR-4706 1 0 0
chr17:75833016|75834447 hsa-miR-4730 1 0 0
chr17:75833016|75834447 hsa-miR-4741 1 0 0
chr17:75833016|75834447 hsa-miR-5787 0 1 0
chr17:75833016|75834447 hsa-miR-6081 0 1 0
chr17:75833016|75834447 hsa-miR-6085 1 0 0
chr17:75833016|75834447 hsa-miR-7976 0 1 0
chr17:75833016|75834447 hsa-miR-9900 1 1 0
chr17:75833016|75834447 hsa-miR-12128 0 1 0
chr17:75833016|75834447 hsa-miR-4747-3p 1 0 0
chr17:75833016|75834447 hsa-miR-18a-3p 1 0 0
chr17:75833016|75834447 hsa-miR-6747-3p 0 1 0
chr17:75833016|75834447 hsa-miR-6879-3p 0 1 0
chr17:75833016|75834447 hsa-miR-6822-3p 1 0 0
chr17:75833016|75834447 hsa-miR-6854-5p 0 1 0
chr17:75833016|75834447 hsa-miR-6510-5p 0 1 0
chr17:75833016|75834447 hsa-miR-7851-3p 0 1 0
chr17:75833016|75834447 hsa-miR-6875-3p 0 1 0
chr17:75833016|75834447 hsa-miR-6727-5p 1 0 0
chr17:75833016|75834447 hsa-miR-6721-5p 1 0 0
chr17:75833016|75834447 hsa-miR-3189-5p 1 0 0
chr17:75833016|75834447 hsa-miR-7110-3p 0 1 0
chr17:75833016|75834447 hsa-miR-6868-3p 0 1 0
chr17:75833016|75834447 hsa-miR-6782-5p 1 0 0
chr17:75833016|75834447 hsa-miR-6850-5p 1 0 0
chr17:75833016|75834447 hsa-miR-6786-5p 1 0 0
chr17:75833016|75834447 hsa-miR-4738-3p 0 1 0
chr17:75833016|75834447 hsa-miR-4793-5p 1 0 0
chr17:75833016|75834447 hsa-miR-1229-5p 1 0 0
chr17:75833016|75834447 hsa-miR-5010-3p 0 1 0
chr17:75833016|75834447 hsa-miR-5001-3p 1 1 0
chr17:75833016|75834447 hsa-miR-6878-3p 0 1 0
chr17:75833016|75834447 hsa-miR-4667-3p 0 1 0
chr17:75833016|75834447 hsa-miR-6824-5p 1 0 0
chr17:75833016|75834447 hsa-miR-6789-5p 1 1 0
chr17:75833016|75834447 hsa-miR-7112-5p 1 0 0
chr17:75833016|75834447 hsa-miR-6870-3p 1 1 0
chr17:75833016|75834447 hsa-miR-4732-3p 0 1 0
chr17:75833016|75834447 hsa-miR-6793-3p 1 0 0
chr17:75833016|75834447 hsa-miR-106b-3p 0 1 0
chr17:75833016|75834447 hsa-miR-1468-5p 0 1 0
chr17:75833016|75834447 hsa-miR-1296-5p 1 0 0
chr17:75833016|75834447 hsa-miR-3151-3p 1 0 0
chr17:75833016|75834447 hsa-miR-2277-5p 1 0 0
chr17:75833016|75834447 hsa-miR-4680-5p 0 1 0
chr17:75833016|75834447 hsa-miR-6802-3p 0 1 0
chr17:75833016|75834447 hsa-miR-6883-3p 1 0 0
chr17:75833016|75834447 hsa-miR-6779-3p 0 1 0
chr17:75833016|75834447 hsa-miR-6846-3p 0 1 0
chr17:75833016|75834447 hsa-miR-6729-3p 0 1 0
chr17:75833016|75834447 hsa-miR-6847-3p 0 1 0
chr17:75833016|75834447 hsa-miR-6732-3p 0 1 0
chr17:75833016|75834447 hsa-miR-589-3p 0 1 0
chr17:75833016|75834447 hsa-miR-4714-5p 0 1 0
chr17:75833016|75834447 hsa-miR-500a-3p 0 1 0
chr17:75833016|75834447 hsa-miR-4763-3p 1 1 0
chr17:75833016|75834447 hsa-miR-6769b-5p 1 0 0
chr17:75833016|75834447 hsa-miR-5001-5p 1 0 0
chr17:75833016|75834447 hsa-miR-6743-5p 1 0 0
chr17:75833016|75834447 hsa-miR-6752-5p 1 0 0
chr17:75833016|75834447 hsa-miR-6754-5p 0 1 0
chr17:75833016|75834447 hsa-miR-6756-5p 1 0 0
chr17:75833016|75834447 hsa-miR-6769a-5p 0 1 0
chr17:75833016|75834447 hsa-miR-6803-5p 1 0 0
chr17:75833016|75834447 hsa-miR-6842-5p 1 0 0
chr17:75833016|75834447 hsa-miR-6722-3p 0 1 0
chr17:75833016|75834447 hsa-miR-3620-5p 1 0 0
chr17:75833016|75834447 hsa-miR-1909-3p 0 1 0
chr17:75833016|75834447 hsa-miR-6889-5p 1 0 0
chr17:75833016|75834447 hsa-miR-6885-5p 1 0 0
chr17:75833016|75834447 hsa-miR-3085-5p 1 0 0
chr17:75833016|75834447 hsa-miR-6791-3p 1 0 0
chr17:75833016|75834447 hsa-miR-3689d 0 1 0
chr17:75833016|75834447 hsa-miR-6849-5p 1 0 0
chr17:75833016|75834447 hsa-miR-6762-5p 1 1 0
chr17:75833016|75834447 hsa-miR-4757-5p 1 0 0
chr17:75833016|75834447 hsa-miR-6775-3p 1 0 0
chr17:75833016|75834447 hsa-miR-11181-5p 0 1 0
chr17:75833016|75834447 hsa-miR-10394-5p 0 1 0
chr17:75833016|75834447 hsa-miR-6838-5p 0 1 0
chr17:75833016|75834447 hsa-miR-873-5p 0 1 0
chr17:75833016|75834447 hsa-miR-9902 0 1 0
chr17:75833016|75834447 hsa-miR-4704-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:75833016|75834447
ORF Type ORF1
Protein Length 78
Nucleotide Length 234
Protein Sequence MSLDARRGQGWTLAQVLLEPGRLKTGWDGVTVRSDKVPARPGCGRQCGSHGPARPARSAAGHAACSAAAPAPARPLPA
Nucleotide Sequence CTGAGTTTAGACGCACGAAGGGGTCAGGGTTGGACCTTGGCCCAGGTGCTGCTGGAGCCAGGTAGGCTGAAGACGGGATGGGATGGGGTGACTGTGCGGTCGGACAAGGTACCTGCTCGGCCAGGGTGCGGACGCCAGTGCGGATCTCATGGCCCAGCCCGGCCAGCGCGCTCTGCAGCTGGGCATGCAGCGTGTTCTGCAGCTGCCCCTGCTCCAGCACGGCCCCTACCCGCT
CircID chr17:75833016|75834447
ORF Type ORF2
Protein Length 48
Nucleotide Length 147
Protein Sequence MASSGRTDSLTPTSFWMCLAMPTSNWRHKTEEGGRSGHESGMEEFLRA
Nucleotide Sequence ATGGCATCCTCAGGCAGGACAGACTCCCTGACGCCCACCAGTTTCTGGATGTGCTTGGCGATGCCCACCTCCAACTGGAGACACAAAACGGAAGAAGGAGGGAGGTCAGGGCATGAGTCGGGGATGGAAGAGTTCCTTAGGGCCTGA
CircID chr17:75833016|75834447
ORF Type ORF3
Protein Length 48
Nucleotide Length 144
Protein Sequence MCGRTRYLLGQGADASADLMAQPGQRALQLGMQRVLQLPLLQHGPYPL
Nucleotide Sequence CTGTGCGGTCGGACAAGGTACCTGCTCGGCCAGGGTGCGGACGCCAGTGCGGATCTCATGGCCCAGCCCGGCCAGCGCGCTCTGCAGCTGGGCATGCAGCGTGTTCTGCAGCTGCCCCTGCTCCAGCACGGCCCCTACCCGCTG
CircID chr17:75833016|75834447
ORF Type ORF4
Protein Length 31
Nucleotide Length 96
Protein Sequence MSRGWKSSLGPEFRRTKGSGLDLGPGAAGAR
Nucleotide Sequence ATGAGTCGGGGATGGAAGAGTTCCTTAGGGCCTGAGTTTAGACGCACGAAGGGGTCAGGGTTGGACCTTGGCCCAGGTGCTGCTGGAGCCAGGTAG
CircID chr17:75833016|75834447
ORF Type ORF5
Protein Length 52
Nucleotide Length 156
Protein Sequence MGWGDCAVGQGTCSARVRTPVRISWPSPASALCSWACSVFCSCPCSSTAPTR
Nucleotide Sequence ATGGGATGGGGTGACTGTGCGGTCGGACAAGGTACCTGCTCGGCCAGGGTGCGGACGCCAGTGCGGATCTCATGGCCCAGCCCGGCCAGCGCGCTCTGCAGCTGGGCATGCAGCGTGTTCTGCAGCTGCCCCTGCTCCAGCACGGCCCCTACCCGC
CircID chr17:75833016|75834447
ORF Type ORF6
Protein Length 84
Nucleotide Length 255
Protein Sequence MEQGQLQNTLHAQLQSALAGLGHEIRTGVRTLAEQVPCPTAQSPHPIPSSAYLAPAAPGPRSNPDPFVRLNSGPKELFHPRLMP
Nucleotide Sequence CTGGAGCAGGGGCAGCTGCAGAACACGCTGCATGCCCAGCTGCAGAGCGCGCTGGCCGGGCTGGGCCATGAGATCCGCACTGGCGTCCGCACCCTGGCCGAGCAGGTACCTTGTCCGACCGCACAGTCACCCCATCCCATCCCGTCTTCAGCCTACCTGGCTCCAGCAGCACCTGGGCCAAGGTCCAACCCTGACCCCTTCGTGCGTCTAAACTCAGGCCCTAAGGAACTCTTCCATCCCCGACTCATGCCCTGA
CircID chr17:75833016|75834447
ORF Type ORF7
Protein Length 59
Nucleotide Length 180
Protein Sequence MPSCRARWPGWAMRSALASAPWPSRYLVRPHSHPIPSRLQPTWLQQHLGQGPTLTPSCV
Nucleotide Sequence ATGCCCAGCTGCAGAGCGCGCTGGCCGGGCTGGGCCATGAGATCCGCACTGGCGTCCGCACCCTGGCCGAGCAGGTACCTTGTCCGACCGCACAGTCACCCCATCCCATCCCGTCTTCAGCCTACCTGGCTCCAGCAGCACCTGGGCCAAGGTCCAACCCTGACCCCTTCGTGCGTCTAA
CircID chr17:75833016|75834447
ORF Type ORF8
Protein Length 37
Nucleotide Length 111
Protein Sequence MCLQLEVGIAKHIQKLVGVRESVLPEDAILPLMKFLE
Nucleotide Sequence TTGTGTCTCCAGTTGGAGGTGGGCATCGCCAAGCACATCCAGAAACTGGTGGGCGTCAGGGAGTCTGTCCTGCCTGAGGATGCCATTCTGCCCCTGATGAAGTTCCTGGAG
CircID chr17:75833016|75834447
ORF Type ORF9
Protein Length 27
Nucleotide Length 84
Protein Sequence MSDRTVTPSHPVFSLPGSSSTWAKVQP
Nucleotide Sequence TTGTCCGACCGCACAGTCACCCCATCCCATCCCGTCTTCAGCCTACCTGGCTCCAGCAGCACCTGGGCCAAGGTCCAACCCTGA
CircID chr17:75833016|75834447
ORF Type ORF10
Protein Length 39
Nucleotide Length 120
Protein Sequence MTSLLLPFCVSSWRWASPSTSRNWWASGSLSCLRMPFCP
Nucleotide Sequence CTGACCTCCCTCCTTCTTCCGTTTTGTGTCTCCAGTTGGAGGTGGGCATCGCCAAGCACATCCAGAAACTGGTGGGCGTCAGGGAGTCTGTCCTGCCTGAGGATGCCATTCTGCCCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab