CircRNA Information

General Information
circRNA Basic Information
CircID chr17:75845901|75846051
Strand +
CircType exon
Host Gene ENSG00000132471.10;
Algorism CIRI2;
Sequence CTCTCACTTCCTTCTAGAAGGAGCTTCCTGACTGGAACCAGAGAATGCATGTCTGTCCACTTGGTGGCTGCTGGGTGGGGCCGGGAACAAGGGCCCCTGACCCTGTGTGCTGGCCGGGACCTGCCACCAGCCCCCCAGCCTGCTTCTTCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:75845901|75846051 hsa-miR-326 0 0 1
chr17:75845901|75846051 hsa-miR-586 0 0 1
chr17:75845901|75846051 hsa-miR-637 0 0 1
chr17:75845901|75846051 hsa-miR-873-5p 0 0 1
chr17:75845901|75846051 hsa-miR-873-3p 0 0 1
chr17:75845901|75846051 hsa-miR-1237-5p 0 0 1
chr17:75845901|75846051 hsa-miR-1237-3p 0 0 1
chr17:75845901|75846051 hsa-miR-1248 0 0 1
chr17:75845901|75846051 hsa-miR-1252-5p 0 0 1
chr17:75845901|75846051 hsa-miR-1252-3p 0 0 1
chr17:75845901|75846051 hsa-miR-145-5p 0 0 1
chr17:75845901|75846051 hsa-miR-1207-5p 0 0 1
chr17:75845901|75846051 hsa-miR-518d-5p 0 0 1
chr17:75845901|75846051 hsa-miR-519b-5p 0 1 1
chr17:75845901|75846051 hsa-miR-519c-5p 0 1 1
chr17:75845901|75846051 hsa-miR-520c-5p 0 0 1
chr17:75845901|75846051 hsa-miR-330-5p 0 0 1
chr17:75845901|75846051 hsa-miR-220c 0 0 1
chr17:75845901|75846051 hsa-miR-138 0 0 1
chr17:75845901|75846051 hsa-miR-526a 0 0 1
chr17:75845901|75846051 hsa-miR-612 1 0 0
chr17:75845901|75846051 hsa-miR-762 1 1 0
chr17:75845901|75846051 hsa-miR-3138 0 1 0
chr17:75845901|75846051 hsa-miR-3185 1 1 0
chr17:75845901|75846051 hsa-miR-4312 0 1 0
chr17:75845901|75846051 hsa-miR-4448 0 1 0
chr17:75845901|75846051 hsa-miR-4449 0 1 0
chr17:75845901|75846051 hsa-miR-4487 1 0 0
chr17:75845901|75846051 hsa-miR-4488 1 0 0
chr17:75845901|75846051 hsa-miR-4498 0 1 0
chr17:75845901|75846051 hsa-miR-4656 1 0 0
chr17:75845901|75846051 hsa-miR-4741 1 0 0
chr17:75845901|75846051 hsa-miR-5787 1 1 0
chr17:75845901|75846051 hsa-miR-6081 1 0 0
chr17:75845901|75846051 hsa-miR-8089 1 0 0
chr17:75845901|75846051 hsa-miR-6894-5p 1 0 0
chr17:75845901|75846051 hsa-miR-218-1-3p 0 1 0
chr17:75845901|75846051 hsa-miR-6089 1 0 0
chr17:75845901|75846051 hsa-miR-874-5p 0 1 0
chr17:75845901|75846051 hsa-miR-770-5p 1 1 0
chr17:75845901|75846051 hsa-miR-6768-5p 1 1 0
chr17:75845901|75846051 hsa-miR-3194-5p 1 0 0
chr17:75845901|75846051 hsa-miR-3944-3p 1 0 0
chr17:75845901|75846051 hsa-miR-1908-3p 1 0 0
chr17:75845901|75846051 hsa-miR-4691-3p 1 1 0
chr17:75845901|75846051 hsa-miR-4690-5p 1 1 0
chr17:75845901|75846051 hsa-miR-7156-3p 1 0 0
chr17:75845901|75846051 hsa-miR-4758-3p 0 1 0
chr17:75845901|75846051 hsa-miR-4664-3p 0 1 0
chr17:75845901|75846051 hsa-miR-6851-3p 0 1 0
chr17:75845901|75846051 hsa-miR-6780b-3p 0 1 0
chr17:75845901|75846051 hsa-miR-4763-3p 1 0 0
chr17:75845901|75846051 hsa-miR-6816-5p 1 0 0
chr17:75845901|75846051 hsa-miR-6756-5p 1 0 0
chr17:75845901|75846051 hsa-miR-6803-5p 1 0 0
chr17:75845901|75846051 hsa-miR-6813-5p 1 1 0
chr17:75845901|75846051 hsa-miR-3620-5p 1 0 0
chr17:75845901|75846051 hsa-miR-328-5p 1 1 0
chr17:75845901|75846051 hsa-miR-6846-5p 1 1 0
chr17:75845901|75846051 hsa-miR-6848-5p 1 1 0
chr17:75845901|75846051 hsa-miR-3940-5p 1 0 0
chr17:75845901|75846051 hsa-miR-518e-5p 0 1 0
chr17:75845901|75846051 hsa-miR-519a-5p 0 1 0
chr17:75845901|75846051 hsa-miR-522-5p 0 1 0
chr17:75845901|75846051 hsa-miR-523-5p 0 1 0
chr17:75845901|75846051 hsa-miR-10392-3p 0 1 0
chr17:75845901|75846051 hsa-miR-3619-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:75845901|75846051
ORF Type ORF1
Protein Length 41
Nucleotide Length 123
Protein Sequence MTGTRECMSVHLVAAGWGREQGPLTLCAGRDLPPAPQPASS
Nucleotide Sequence CTGACTGGAACCAGAGAATGCATGTCTGTCCACTTGGTGGCTGCTGGGTGGGGCCGGGAACAAGGGCCCCTGACCCTGTGTGCTGGCCGGGACCTGCCACCAGCCCCCCAGCCTGCTTCTTCC

CircID chr17:75845901|75846051
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MHVCPLGGCWVGPGTRAPDPVCWPGPATSPPACFF
Nucleotide Sequence ATGCATGTCTGTCCACTTGGTGGCTGCTGGGTGGGGCCGGGAACAAGGGCCCCTGACCCTGTGTGCTGGCCGGGACCTGCCACCAGCCCCCCAGCCTGCTTCTTC

CircID chr17:75845901|75846051
ORF Type ORF3
Protein Length 38
Nucleotide Length 117
Protein Sequence MVAGPGQHTGSGALVPGPTQQPPSGQTCILWFQSGSSF
Nucleotide Sequence CTGGTGGCAGGTCCCGGCCAGCACACAGGGTCAGGGGCCCTTGTTCCCGGCCCCACCCAGCAGCCACCAAGTGGACAGACATGCATTCTCTGGTTCCAGTCAGGAAGCTCCTTCTAG

CircID chr17:75845901|75846051
ORF Type ORF4
Protein Length 44
Nucleotide Length 135
Protein Sequence MGGWWQVPASTQGQGPLFPAPPSSHQVDRHAFSGSSQEAPSRRK
Nucleotide Sequence CTGGGGGGCTGGTGGCAGGTCCCGGCCAGCACACAGGGTCAGGGGCCCTTGTTCCCGGCCCCACCCAGCAGCCACCAAGTGGACAGACATGCATTCTCTGGTTCCAGTCAGGAAGCTCCTTCTAGAAGGAAGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites