CircRNA Information

General Information
circRNA Basic Information
CircID chr17:75874287|75874400
Strand +
CircType exon
Host Gene ENSG00000132481.5;
Algorism CIRI2;
Sequence CAGCATGAGTCCCACACACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGACCCCCAGACCCTGTTCCCCTGCAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:75874287|75874400 hsa-miR-568 0 0 1
chr17:75874287|75874400 hsa-miR-609 0 0 1
chr17:75874287|75874400 hsa-miR-637 1 1 1
chr17:75874287|75874400 hsa-miR-661 0 0 1
chr17:75874287|75874400 hsa-miR-1182 1 1 1
chr17:75874287|75874400 hsa-miR-1205 0 0 1
chr17:75874287|75874400 hsa-miR-1253 0 0 1
chr17:75874287|75874400 hsa-miR-671-5p 1 1 1
chr17:75874287|75874400 hsa-miR-615-5p 1 1 1
chr17:75874287|75874400 hsa-miR-1184 0 0 1
chr17:75874287|75874400 hsa-miR-574-5p 0 0 1
chr17:75874287|75874400 hsa-miR-644 0 0 1
chr17:75874287|75874400 hsa-miR-1300 0 0 1
chr17:75874287|75874400 hsa-miR-1254 0 0 1
chr17:75874287|75874400 hsa-miR-147 0 0 1
chr17:75874287|75874400 hsa-miR-147a 0 1 0
chr17:75874287|75874400 hsa-miR-557 1 0 0
chr17:75874287|75874400 hsa-miR-658 1 0 0
chr17:75874287|75874400 hsa-miR-762 1 0 0
chr17:75874287|75874400 hsa-miR-1183 1 0 0
chr17:75874287|75874400 hsa-miR-1275 1 0 0
chr17:75874287|75874400 hsa-miR-3141 1 0 0
chr17:75874287|75874400 hsa-miR-3175 1 0 0
chr17:75874287|75874400 hsa-miR-320e 1 0 0
chr17:75874287|75874400 hsa-miR-3196 1 0 0
chr17:75874287|75874400 hsa-miR-4298 1 0 0
chr17:75874287|75874400 hsa-miR-4306 1 0 0
chr17:75874287|75874400 hsa-miR-4271 1 0 0
chr17:75874287|75874400 hsa-miR-3652 1 0 0
chr17:75874287|75874400 hsa-miR-3929 1 1 0
chr17:75874287|75874400 hsa-miR-4421 1 0 0
chr17:75874287|75874400 hsa-miR-4455 0 1 0
chr17:75874287|75874400 hsa-miR-4463 1 0 0
chr17:75874287|75874400 hsa-miR-4478 1 0 0
chr17:75874287|75874400 hsa-miR-4486 1 0 0
chr17:75874287|75874400 hsa-miR-4488 1 0 0
chr17:75874287|75874400 hsa-miR-4498 1 0 0
chr17:75874287|75874400 hsa-miR-4505 1 1 0
chr17:75874287|75874400 hsa-miR-4510 1 0 0
chr17:75874287|75874400 hsa-miR-1587 1 0 0
chr17:75874287|75874400 hsa-miR-4651 1 0 0
chr17:75874287|75874400 hsa-miR-4656 1 0 0
chr17:75874287|75874400 hsa-miR-4658 0 1 0
chr17:75874287|75874400 hsa-miR-4689 1 0 0
chr17:75874287|75874400 hsa-miR-4706 1 0 0
chr17:75874287|75874400 hsa-miR-4710 1 0 0
chr17:75874287|75874400 hsa-miR-4721 1 0 0
chr17:75874287|75874400 hsa-miR-4734 1 0 0
chr17:75874287|75874400 hsa-miR-4739 1 0 0
chr17:75874287|75874400 hsa-miR-5093 1 1 0
chr17:75874287|75874400 hsa-miR-5192 1 0 0
chr17:75874287|75874400 hsa-miR-5698 1 0 0
chr17:75874287|75874400 hsa-miR-5787 1 1 0
chr17:75874287|75874400 hsa-miR-6088 1 0 0
chr17:75874287|75874400 hsa-miR-6125 1 0 0
chr17:75874287|75874400 hsa-miR-6127 1 0 0
chr17:75874287|75874400 hsa-miR-6129 1 0 0
chr17:75874287|75874400 hsa-miR-6132 1 0 0
chr17:75874287|75874400 hsa-miR-6133 1 0 0
chr17:75874287|75874400 hsa-miR-6745 1 0 0
chr17:75874287|75874400 hsa-miR-7150 1 0 0
chr17:75874287|75874400 hsa-miR-8085 1 1 0
chr17:75874287|75874400 hsa-miR-12119 1 0 0
chr17:75874287|75874400 hsa-miR-6734-5p 1 0 0
chr17:75874287|75874400 hsa-miR-4731-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6861-5p 1 0 0
chr17:75874287|75874400 hsa-miR-7106-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6825-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6799-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6510-5p 1 0 0
chr17:75874287|75874400 hsa-miR-8071 1 0 0
chr17:75874287|75874400 hsa-miR-7851-3p 1 1 0
chr17:75874287|75874400 hsa-miR-6089 1 0 0
chr17:75874287|75874400 hsa-miR-3192-5p 0 1 0
chr17:75874287|75874400 hsa-miR-6757-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6880-5p 1 0 0
chr17:75874287|75874400 hsa-miR-7847-3p 1 0 0
chr17:75874287|75874400 hsa-miR-6741-5p 1 0 0
chr17:75874287|75874400 hsa-miR-8069 1 0 0
chr17:75874287|75874400 hsa-miR-5589-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6776-5p 1 1 0
chr17:75874287|75874400 hsa-miR-7845-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6742-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6798-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6760-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6782-5p 1 0 0
chr17:75874287|75874400 hsa-miR-5088-5p 1 0 0
chr17:75874287|75874400 hsa-miR-185-5p 1 0 0
chr17:75874287|75874400 hsa-miR-204-3p 1 0 0
chr17:75874287|75874400 hsa-miR-30c-2-3p 1 0 0
chr17:75874287|75874400 hsa-miR-1228-5p 1 0 0
chr17:75874287|75874400 hsa-miR-92b-5p 1 0 0
chr17:75874287|75874400 hsa-miR-4446-3p 1 0 0
chr17:75874287|75874400 hsa-miR-149-3p 1 0 0
chr17:75874287|75874400 hsa-miR-6824-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6878-5p 1 0 0
chr17:75874287|75874400 hsa-miR-5010-5p 1 0 0
chr17:75874287|75874400 hsa-miR-664b-5p 1 0 0
chr17:75874287|75874400 hsa-miR-517-5p 0 1 0
chr17:75874287|75874400 hsa-miR-1207-5p 1 0 0
chr17:75874287|75874400 hsa-miR-1273h-5p 1 0 0
chr17:75874287|75874400 hsa-miR-4763-3p 1 0 0
chr17:75874287|75874400 hsa-miR-6769b-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6778-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6787-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6870-5p 1 0 0
chr17:75874287|75874400 hsa-miR-1343-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6726-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6752-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6754-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6756-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6803-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6842-5p 1 0 0
chr17:75874287|75874400 hsa-miR-7107-5p 1 0 0
chr17:75874287|75874400 hsa-miR-7110-5p 1 0 0
chr17:75874287|75874400 hsa-miR-11181-3p 1 0 0
chr17:75874287|75874400 hsa-miR-1249-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6722-3p 1 0 0
chr17:75874287|75874400 hsa-miR-6751-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6779-5p 1 1 0
chr17:75874287|75874400 hsa-miR-6780a-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6788-5p 1 1 0
chr17:75874287|75874400 hsa-miR-6797-5p 1 1 0
chr17:75874287|75874400 hsa-miR-6808-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6879-5p 1 0 0
chr17:75874287|75874400 hsa-miR-7111-5p 1 0 0
chr17:75874287|75874400 hsa-miR-3620-5p 1 0 0
chr17:75874287|75874400 hsa-miR-4728-5p 1 0 0
chr17:75874287|75874400 hsa-miR-5196-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6780b-5p 1 0 0
chr17:75874287|75874400 hsa-miR-1237-5p 1 0 0
chr17:75874287|75874400 hsa-miR-1909-3p 1 1 0
chr17:75874287|75874400 hsa-miR-4632-5p 1 0 0
chr17:75874287|75874400 hsa-miR-4649-5p 1 0 0
chr17:75874287|75874400 hsa-miR-4701-3p 1 0 0
chr17:75874287|75874400 hsa-miR-4725-3p 1 1 0
chr17:75874287|75874400 hsa-miR-6729-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6794-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6858-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6883-5p 1 0 0
chr17:75874287|75874400 hsa-miR-4723-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6831-5p 1 0 0
chr17:75874287|75874400 hsa-miR-939-5p 1 1 0
chr17:75874287|75874400 hsa-miR-4758-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6511b-5p 1 0 0
chr17:75874287|75874400 hsa-miR-30c-1-3p 1 1 0
chr17:75874287|75874400 hsa-miR-6731-5p 1 1 0
chr17:75874287|75874400 hsa-miR-6758-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6856-5p 1 0 0
chr17:75874287|75874400 hsa-miR-4665-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6736-5p 1 0 0
chr17:75874287|75874400 hsa-miR-4646-5p 1 0 0
chr17:75874287|75874400 hsa-miR-4747-5p 1 0 0
chr17:75874287|75874400 hsa-miR-4716-3p 1 0 0
chr17:75874287|75874400 hsa-miR-6750-5p 1 0 0
chr17:75874287|75874400 hsa-miR-6785-5p 1 0 0
chr17:75874287|75874400 hsa-miR-320a-3p 1 0 0
chr17:75874287|75874400 hsa-miR-320b 1 0 0
chr17:75874287|75874400 hsa-miR-6884-5p 1 0 0
chr17:75874287|75874400 hsa-miR-3059-3p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:75874287|75874400
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MSPTHPAFSFLEASTFLYTQPSLSQAGGPPDPVPLQ
Nucleotide Sequence ATGAGTCCCACACACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGACCCCCAGACCCTGTTCCCCTGCAG
CircID chr17:75874287|75874400
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MGVLLPGRGKAECIKRWKPLEMRRLGVWDSC
Nucleotide Sequence CTGGGGGTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGGTGTGTGGGACTCATGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab