CircRNA Information

General Information
circRNA Basic Information
CircID chr17:75991515|75991623
Strand +
CircType exon
Host Gene ENSG00000257949.5;
Algorism CIRI2;
Sequence CCTGCTGATGCTGGAGCTCCCCGAGGACGATGTACAGGGAGCCCACCTGGGCGTGGAAGGGCTCCACCAACTTGGTACAGACAAGAACCTGGTGCTGATCGGATCCGTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:75991515|75991623 hsa-miR-29a-5p 0 0 1
chr17:75991515|75991623 hsa-miR-29a-3p 0 0 1
chr17:75991515|75991623 hsa-miR-214-5p 0 0 1
chr17:75991515|75991623 hsa-miR-214-3p 0 0 1
chr17:75991515|75991623 hsa-miR-29c-5p 0 0 1
chr17:75991515|75991623 hsa-miR-29c-3p 0 0 1
chr17:75991515|75991623 hsa-miR-578 0 0 1
chr17:75991515|75991623 hsa-miR-632 0 0 1
chr17:75991515|75991623 hsa-miR-766-5p 0 0 1
chr17:75991515|75991623 hsa-miR-766-3p 0 0 1
chr17:75991515|75991623 hsa-miR-541-5p 0 0 1
chr17:75991515|75991623 hsa-miR-541-3p 0 0 1
chr17:75991515|75991623 hsa-miR-920 0 1 1
chr17:75991515|75991623 hsa-miR-922 0 0 1
chr17:75991515|75991623 hsa-miR-939-5p 0 0 1
chr17:75991515|75991623 hsa-miR-939-3p 0 0 1
chr17:75991515|75991623 hsa-miR-1231 0 0 1
chr17:75991515|75991623 hsa-miR-486-5p 0 0 1
chr17:75991515|75991623 hsa-miR-127-3p 0 1 1
chr17:75991515|75991623 hsa-miR-542-5p 0 0 1
chr17:75991515|75991623 hsa-miR-339-5p 0 0 1
chr17:75991515|75991623 hsa-miR-654-5p 0 1 1
chr17:75991515|75991623 hsa-miR-338-3p 0 1 1
chr17:75991515|75991623 hsa-miR-1274a 0 0 1
chr17:75991515|75991623 hsa-miR-1233 0 0 1
chr17:75991515|75991623 hsa-miR-1274b 0 0 1
chr17:75991515|75991623 hsa-miR-129-3p 0 0 1
chr17:75991515|75991623 hsa-miR-29b 0 0 1
chr17:75991515|75991623 hsa-miR-4454 1 1 0
chr17:75991515|75991623 hsa-miR-4730 1 1 0
chr17:75991515|75991623 hsa-miR-6825-5p 1 0 0
chr17:75991515|75991623 hsa-miR-1233-3p 0 1 0
chr17:75991515|75991623 hsa-miR-218-1-3p 1 0 0
chr17:75991515|75991623 hsa-miR-6786-5p 1 0 0
chr17:75991515|75991623 hsa-miR-6824-5p 1 0 0
chr17:75991515|75991623 hsa-miR-3065-3p 1 1 0
chr17:75991515|75991623 hsa-miR-7106-3p 0 1 0
chr17:75991515|75991623 hsa-miR-1343-5p 1 0 0
chr17:75991515|75991623 hsa-miR-6726-5p 0 1 0
chr17:75991515|75991623 hsa-miR-6756-5p 1 0 0
chr17:75991515|75991623 hsa-miR-6777-5p 1 1 0
chr17:75991515|75991623 hsa-miR-6889-5p 1 1 0
chr17:75991515|75991623 hsa-miR-6885-5p 1 0 0
chr17:75991515|75991623 hsa-miR-10398-5p 0 1 0
chr17:75991515|75991623 hsa-miR-10400-3p 0 1 0
chr17:75991515|75991623 hsa-miR-6500-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr17:75991515|75991623
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence LLMLELPEDDVQGAHLGVEGLHQLGTDKNLVLIGSV
Nucleotide Sequence CTGCTGATGCTGGAGCTCCCCGAGGACGATGTACAGGGAGCCCACCTGGGCGTGGAAGGGCTCCACCAACTTGGTACAGACAAGAACCTGGTGCTGATCGGATCCGTG

CircID chr17:75991515|75991623
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MSVPSWWSPSTPRWAPCTSSSGSSSISR
Nucleotide Sequence TTGTCTGTACCAAGTTGGTGGAGCCCTTCCACGCCCAGGTGGGCTCCCTGTACATCGTCCTCGGGGAGCTCCAGCATCAGCAGG

CircID chr17:75991515|75991623
ORF Type ORF3
Protein Length 26
Nucleotide Length 78
Protein Sequence MYQVGGALPRPGGLPVHRPRGAPASA
Nucleotide Sequence CTGTACCAAGTTGGTGGAGCCCTTCCACGCCCAGGTGGGCTCCCTGTACATCGTCCTCGGGGAGCTCCAGCATCAGCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites