CircRNA Information

General Information
circRNA Basic Information
CircID chr17:76009410|76009508
Strand -
CircType exon
Host Gene ENSG00000167880.6;
Algorism CIRI2;
Sequence CTCGGGGCTCCTCTCATGCCTCACCACCTCCTGGGTCACCTCCTTGTACTCCACCGTGGGCTTCTGGGCCCGCAGGACCTCCAGGTCGGGCAGCAGCTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:76009410|76009508 hsa-miR-619-5p 0 0 1
chr17:76009410|76009508 hsa-miR-619-3p 0 0 1
chr17:76009410|76009508 hsa-miR-624-5p 0 0 1
chr17:76009410|76009508 hsa-miR-624-3p 0 0 1
chr17:76009410|76009508 hsa-miR-631 0 0 1
chr17:76009410|76009508 hsa-miR-665 1 1 1
chr17:76009410|76009508 hsa-miR-1827 0 0 1
chr17:76009410|76009508 hsa-miR-1225-3p 0 0 1
chr17:76009410|76009508 hsa-miR-608 1 0 0
chr17:76009410|76009508 hsa-miR-637 1 1 0
chr17:76009410|76009508 hsa-miR-663b 1 0 0
chr17:76009410|76009508 hsa-miR-3165 1 0 0
chr17:76009410|76009508 hsa-miR-4260 1 0 0
chr17:76009410|76009508 hsa-miR-4254 0 1 0
chr17:76009410|76009508 hsa-miR-4270 1 0 0
chr17:76009410|76009508 hsa-miR-4449 1 0 0
chr17:76009410|76009508 hsa-miR-4533 1 0 0
chr17:76009410|76009508 hsa-miR-4734 0 1 0
chr17:76009410|76009508 hsa-miR-4739 1 0 0
chr17:76009410|76009508 hsa-miR-6075 1 0 0
chr17:76009410|76009508 hsa-miR-6134 0 1 0
chr17:76009410|76009508 hsa-miR-6840-3p 0 1 0
chr17:76009410|76009508 hsa-miR-504-3p 1 0 0
chr17:76009410|76009508 hsa-miR-6765-5p 1 0 0
chr17:76009410|76009508 hsa-miR-671-5p 1 0 0
chr17:76009410|76009508 hsa-miR-6799-5p 1 0 0
chr17:76009410|76009508 hsa-miR-6880-5p 0 1 0
chr17:76009410|76009508 hsa-miR-7847-3p 1 1 0
chr17:76009410|76009508 hsa-miR-4695-5p 1 0 0
chr17:76009410|76009508 hsa-miR-6742-5p 1 0 0
chr17:76009410|76009508 hsa-miR-6732-5p 1 0 0
chr17:76009410|76009508 hsa-miR-6798-5p 1 0 0
chr17:76009410|76009508 hsa-miR-6786-5p 1 0 0
chr17:76009410|76009508 hsa-miR-4640-5p 1 0 0
chr17:76009410|76009508 hsa-miR-7854-3p 1 1 0
chr17:76009410|76009508 hsa-miR-4787-5p 1 0 0
chr17:76009410|76009508 hsa-miR-423-5p 1 0 0
chr17:76009410|76009508 hsa-miR-598-5p 1 0 0
chr17:76009410|76009508 hsa-miR-6812-5p 1 0 0
chr17:76009410|76009508 hsa-miR-6865-5p 1 0 0
chr17:76009410|76009508 hsa-miR-6775-5p 1 0 0
chr17:76009410|76009508 hsa-miR-6737-5p 1 0 0
chr17:76009410|76009508 hsa-miR-6752-5p 1 1 0
chr17:76009410|76009508 hsa-miR-6754-5p 1 0 0
chr17:76009410|76009508 hsa-miR-6756-5p 1 0 0
chr17:76009410|76009508 hsa-miR-6803-5p 1 0 0
chr17:76009410|76009508 hsa-miR-6815-5p 1 1 0
chr17:76009410|76009508 hsa-miR-6819-5p 1 0 0
chr17:76009410|76009508 hsa-miR-6851-5p 1 1 0
chr17:76009410|76009508 hsa-miR-7110-5p 1 0 0
chr17:76009410|76009508 hsa-miR-6751-5p 1 0 0
chr17:76009410|76009508 hsa-miR-4728-5p 1 0 0
chr17:76009410|76009508 hsa-miR-10396b-5p 1 0 0
chr17:76009410|76009508 hsa-miR-10526-3p 1 0 0
chr17:76009410|76009508 hsa-miR-328-5p 1 0 0
chr17:76009410|76009508 hsa-miR-6738-5p 1 0 0
chr17:76009410|76009508 hsa-miR-6773-5p 1 1 0
chr17:76009410|76009508 hsa-miR-4665-5p 1 0 0
chr17:76009410|76009508 hsa-miR-6891-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:76009410|76009508
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MPHHLLGHLLVLHRGLLGPQDLQVGQQL
Nucleotide Sequence ATGCCTCACCACCTCCTGGGTCACCTCCTTGTACTCCACCGTGGGCTTCTGGGCCCGCAGGACCTCCAGGTCGGGCAGCAGCTT
CircID chr17:76009410|76009508
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MLPDLEVLRAQKPTVEYKEVTQEVVRHERSPE
Nucleotide Sequence CTGCTGCCCGACCTGGAGGTCCTGCGGGCCCAGAAGCCCACGGTGGAGTACAAGGAGGTGACCCAGGAGGTGGTGAGGCATGAGAGGAGCCCCGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab