CircRNA Information

General Information
circRNA Basic Information
CircID chr17:76009806|76009985
Strand -
CircType exon
Host Gene ENSG00000167880.6;
Algorism CIRI2;
Sequence CTTGGGCTCCACCGAGCTGATAGCCCGCTCCAGGTCTTCGATGCGAGCCTGTAGCTTGGCCACAGCCTCCTCCGCCTGCTTCCTCCGCGCAGCATCCTCCTCCATCTGCAGCCTCAGAGCCTGGGCTGCCTTGACCATTTCCAGATTCTTCTCCACCTTGACTACCTCTTTCACCACGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:76009806|76009985 hsa-let-7b-5p 0 0 1
chr17:76009806|76009985 hsa-let-7b-3p 0 0 1
chr17:76009806|76009985 hsa-let-7c-5p 0 0 1
chr17:76009806|76009985 hsa-let-7c-3p 0 0 1
chr17:76009806|76009985 hsa-let-7d-5p 0 0 1
chr17:76009806|76009985 hsa-let-7d-3p 0 0 1
chr17:76009806|76009985 hsa-let-7e-5p 0 0 1
chr17:76009806|76009985 hsa-let-7e-3p 0 0 1
chr17:76009806|76009985 hsa-miR-98-5p 0 0 1
chr17:76009806|76009985 hsa-miR-98-3p 0 0 1
chr17:76009806|76009985 hsa-let-7g-5p 0 0 1
chr17:76009806|76009985 hsa-let-7g-3p 0 0 1
chr17:76009806|76009985 hsa-let-7i-5p 0 0 1
chr17:76009806|76009985 hsa-let-7i-3p 0 0 1
chr17:76009806|76009985 hsa-miR-196b-5p 0 0 1
chr17:76009806|76009985 hsa-miR-196b-3p 0 0 1
chr17:76009806|76009985 hsa-miR-484 0 0 1
chr17:76009806|76009985 hsa-miR-522-5p 0 0 1
chr17:76009806|76009985 hsa-miR-522-3p 0 0 1
chr17:76009806|76009985 hsa-miR-583 0 0 1
chr17:76009806|76009985 hsa-miR-619-5p 0 0 1
chr17:76009806|76009985 hsa-miR-619-3p 0 0 1
chr17:76009806|76009985 hsa-miR-631 0 0 1
chr17:76009806|76009985 hsa-miR-658 1 1 1
chr17:76009806|76009985 hsa-miR-765 1 1 1
chr17:76009806|76009985 hsa-miR-760 1 1 1
chr17:76009806|76009985 hsa-miR-663b 0 0 1
chr17:76009806|76009985 hsa-miR-1299 0 0 1
chr17:76009806|76009985 hsa-miR-1253 1 0 1
chr17:76009806|76009985 hsa-miR-423-3p 0 1 1
chr17:76009806|76009985 hsa-miR-485-5p 0 1 1
chr17:76009806|76009985 hsa-miR-875-3p 0 0 1
chr17:76009806|76009985 hsa-let-7a 0 0 1
chr17:76009806|76009985 hsa-let-7f 0 0 1
chr17:76009806|76009985 hsa-miR-196a 0 0 1
chr17:76009806|76009985 hsa-miR-601 1 0 0
chr17:76009806|76009985 hsa-miR-638 1 0 0
chr17:76009806|76009985 hsa-miR-762 1 0 0
chr17:76009806|76009985 hsa-miR-920 1 0 0
chr17:76009806|76009985 hsa-miR-921 1 0 0
chr17:76009806|76009985 hsa-miR-1270 1 0 0
chr17:76009806|76009985 hsa-miR-1275 1 0 0
chr17:76009806|76009985 hsa-miR-2110 1 0 0
chr17:76009806|76009985 hsa-miR-548s 0 1 0
chr17:76009806|76009985 hsa-miR-3125 1 0 0
chr17:76009806|76009985 hsa-miR-3132 1 0 0
chr17:76009806|76009985 hsa-miR-3135a 1 1 0
chr17:76009806|76009985 hsa-miR-3155a 0 1 0
chr17:76009806|76009985 hsa-miR-3185 1 0 0
chr17:76009806|76009985 hsa-miR-3188 1 0 0
chr17:76009806|76009985 hsa-miR-4322 1 0 0
chr17:76009806|76009985 hsa-miR-4271 1 0 0
chr17:76009806|76009985 hsa-miR-3652 1 0 0
chr17:76009806|76009985 hsa-miR-3665 1 0 0
chr17:76009806|76009985 hsa-miR-3714 0 1 0
chr17:76009806|76009985 hsa-miR-3916 1 0 0
chr17:76009806|76009985 hsa-miR-3937 0 1 0
chr17:76009806|76009985 hsa-miR-4458 1 0 0
chr17:76009806|76009985 hsa-miR-4467 1 0 0
chr17:76009806|76009985 hsa-miR-4479 1 0 0
chr17:76009806|76009985 hsa-miR-3155b 0 1 0
chr17:76009806|76009985 hsa-miR-4488 1 0 0
chr17:76009806|76009985 hsa-miR-4510 1 0 0
chr17:76009806|76009985 hsa-miR-4516 1 1 0
chr17:76009806|76009985 hsa-miR-4525 1 0 0
chr17:76009806|76009985 hsa-miR-4531 1 0 0
chr17:76009806|76009985 hsa-miR-4534 1 1 0
chr17:76009806|76009985 hsa-miR-4656 1 0 0
chr17:76009806|76009985 hsa-miR-4657 1 1 0
chr17:76009806|76009985 hsa-miR-4689 1 0 0
chr17:76009806|76009985 hsa-miR-4706 1 1 0
chr17:76009806|76009985 hsa-miR-4739 1 1 0
chr17:76009806|76009985 hsa-miR-4741 1 0 0
chr17:76009806|76009985 hsa-miR-4767 1 0 0
chr17:76009806|76009985 hsa-miR-4784 1 0 0
chr17:76009806|76009985 hsa-miR-5093 0 1 0
chr17:76009806|76009985 hsa-miR-5698 1 0 0
chr17:76009806|76009985 hsa-miR-5703 1 1 0
chr17:76009806|76009985 hsa-miR-5787 1 0 0
chr17:76009806|76009985 hsa-miR-6081 1 0 0
chr17:76009806|76009985 hsa-miR-6088 1 0 0
chr17:76009806|76009985 hsa-miR-6124 1 0 0
chr17:76009806|76009985 hsa-miR-6127 1 0 0
chr17:76009806|76009985 hsa-miR-6133 1 0 0
chr17:76009806|76009985 hsa-miR-6134 1 0 0
chr17:76009806|76009985 hsa-miR-6745 1 1 0
chr17:76009806|76009985 hsa-miR-7974 1 0 0
chr17:76009806|76009985 hsa-miR-8082 0 1 0
chr17:76009806|76009985 hsa-miR-8085 1 0 0
chr17:76009806|76009985 hsa-miR-12114 1 1 0
chr17:76009806|76009985 hsa-miR-12118 1 0 0
chr17:76009806|76009985 hsa-miR-12119 0 1 0
chr17:76009806|76009985 hsa-miR-12127 1 0 0
chr17:76009806|76009985 hsa-miR-323a-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6765-5p 1 0 0
chr17:76009806|76009985 hsa-miR-671-5p 1 0 0
chr17:76009806|76009985 hsa-miR-125b-1-3p 1 0 0
chr17:76009806|76009985 hsa-miR-7106-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6825-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6894-5p 1 1 0
chr17:76009806|76009985 hsa-miR-4687-3p 1 0 0
chr17:76009806|76009985 hsa-miR-25-5p 1 1 0
chr17:76009806|76009985 hsa-miR-6854-5p 0 1 0
chr17:76009806|76009985 hsa-miR-8071 1 0 0
chr17:76009806|76009985 hsa-miR-766-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6804-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6833-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6515-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6089 1 0 0
chr17:76009806|76009985 hsa-miR-6880-5p 1 1 0
chr17:76009806|76009985 hsa-miR-7847-3p 1 1 0
chr17:76009806|76009985 hsa-miR-4695-5p 1 1 0
chr17:76009806|76009985 hsa-miR-6746-5p 1 0 0
chr17:76009806|76009985 hsa-miR-4709-3p 1 0 0
chr17:76009806|76009985 hsa-miR-4722-5p 1 0 0
chr17:76009806|76009985 hsa-miR-7154-3p 1 0 0
chr17:76009806|76009985 hsa-miR-6741-5p 1 0 0
chr17:76009806|76009985 hsa-miR-197-5p 1 0 0
chr17:76009806|76009985 hsa-miR-7108-5p 0 1 0
chr17:76009806|76009985 hsa-miR-3605-5p 1 1 0
chr17:76009806|76009985 hsa-miR-491-5p 1 0 0
chr17:76009806|76009985 hsa-miR-3180-3p 1 0 0
chr17:76009806|76009985 hsa-miR-6772-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6805-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6798-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6760-5p 1 0 0
chr17:76009806|76009985 hsa-miR-3156-5p 0 1 0
chr17:76009806|76009985 hsa-miR-3150b-3p 1 0 0
chr17:76009806|76009985 hsa-miR-6821-5p 1 0 0
chr17:76009806|76009985 hsa-miR-7855-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6786-5p 1 0 0
chr17:76009806|76009985 hsa-miR-1226-5p 1 0 0
chr17:76009806|76009985 hsa-miR-185-5p 1 0 0
chr17:76009806|76009985 hsa-miR-1908-5p 1 0 0
chr17:76009806|76009985 hsa-miR-4690-5p 1 1 0
chr17:76009806|76009985 hsa-miR-877-5p 1 0 0
chr17:76009806|76009985 hsa-miR-4787-5p 1 0 0
chr17:76009806|76009985 hsa-miR-149-3p 1 0 0
chr17:76009806|76009985 hsa-miR-6824-5p 1 0 0
chr17:76009806|76009985 hsa-miR-3158-5p 0 1 0
chr17:76009806|76009985 hsa-miR-6828-5p 0 1 0
chr17:76009806|76009985 hsa-miR-1250-5p 1 0 0
chr17:76009806|76009985 hsa-let-7a-5p 1 1 0
chr17:76009806|76009985 hsa-miR-4750-5p 1 0 0
chr17:76009806|76009985 hsa-miR-4761-5p 1 0 0
chr17:76009806|76009985 hsa-miR-2277-5p 1 0 0
chr17:76009806|76009985 hsa-miR-4766-5p 1 0 0
chr17:76009806|76009985 hsa-miR-10400-5p 1 0 0
chr17:76009806|76009985 hsa-miR-4763-3p 1 0 0
chr17:76009806|76009985 hsa-miR-6769b-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6778-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6787-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6812-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6865-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6870-5p 1 0 0
chr17:76009806|76009985 hsa-miR-3180 1 0 0
chr17:76009806|76009985 hsa-miR-5001-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6726-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6743-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6754-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6769a-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6803-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6813-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6851-5p 1 0 0
chr17:76009806|76009985 hsa-miR-11181-3p 1 1 0
chr17:76009806|76009985 hsa-miR-1249-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6797-5p 1 0 0
chr17:76009806|76009985 hsa-miR-7111-5p 1 0 0
chr17:76009806|76009985 hsa-miR-4728-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6780b-5p 1 0 0
chr17:76009806|76009985 hsa-miR-10526-3p 1 0 0
chr17:76009806|76009985 hsa-miR-1237-5p 1 0 0
chr17:76009806|76009985 hsa-miR-4725-3p 1 0 0
chr17:76009806|76009985 hsa-miR-6729-5p 1 0 0
chr17:76009806|76009985 hsa-miR-675-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6794-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6848-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6858-5p 1 1 0
chr17:76009806|76009985 hsa-miR-6831-5p 1 0 0
chr17:76009806|76009985 hsa-miR-4758-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6758-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6856-5p 1 0 0
chr17:76009806|76009985 hsa-miR-4665-5p 1 0 0
chr17:76009806|76009985 hsa-miR-7151-3p 0 1 0
chr17:76009806|76009985 hsa-miR-3173-3p 1 0 0
chr17:76009806|76009985 hsa-miR-3679-5p 1 0 0
chr17:76009806|76009985 hsa-miR-4747-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6891-5p 1 0 0
chr17:76009806|76009985 hsa-miR-4716-3p 1 0 0
chr17:76009806|76009985 hsa-miR-541-3p 1 0 0
chr17:76009806|76009985 hsa-miR-6791-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6859-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6884-5p 1 1 0
chr17:76009806|76009985 hsa-miR-3619-5p 1 0 0
chr17:76009806|76009985 hsa-miR-4690-3p 0 1 0
chr17:76009806|76009985 hsa-miR-6814-3p 0 1 0
chr17:76009806|76009985 hsa-miR-6872-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:76009806|76009985
ORF Type ORF1
Protein Length 35
Nucleotide Length 105
Protein Sequence MLPPRSILLHLQPQSLGCLDHFQILLHLDYLFHHD
Nucleotide Sequence CTGCTTCCTCCGCGCAGCATCCTCCTCCATCTGCAGCCTCAGAGCCTGGGCTGCCTTGACCATTTCCAGATTCTTCTCCACCTTGACTACCTCTTTCACCACGAC
CircID chr17:76009806|76009985
ORF Type ORF2
Protein Length 59
Nucleotide Length 177
Protein Sequence LGSTELIARSRSSMRACSLATASSACFLRAASSSICSLRAWAALTISRFFSTLTTSFTT
Nucleotide Sequence TTGGGCTCCACCGAGCTGATAGCCCGCTCCAGGTCTTCGATGCGAGCCTGTAGCTTGGCCACAGCCTCCTCCGCCTGCTTCCTCCGCGCAGCATCCTCCTCCATCTGCAGCCTCAGAGCCTGGGCTGCCTTGACCATTTCCAGATTCTTCTCCACCTTGACTACCTCTTTCACCACG
CircID chr17:76009806|76009985
ORF Type ORF3
Protein Length 48
Nucleotide Length 144
Protein Sequence MEMVKAAQALRLQMEEDAARRKQAEEAVAKLQARIEDLERAISSVEPK
Nucleotide Sequence CTGGAAATGGTCAAGGCAGCCCAGGCTCTGAGGCTGCAGATGGAGGAGGATGCTGCGCGGAGGAAGCAGGCGGAGGAGGCTGTGGCCAAGCTACAGGCTCGCATCGAAGACCTGGAGCGGGCTATCAGCTCGGTGGAGCCCAAG
CircID chr17:76009806|76009985
ORF Type ORF4
Protein Length 31
Nucleotide Length 93
Protein Sequence MLRGGSRRRRLWPSYRLASKTWSGLSARWSP
Nucleotide Sequence ATGCTGCGCGGAGGAAGCAGGCGGAGGAGGCTGTGGCCAAGCTACAGGCTCGCATCGAAGACCTGGAGCGGGCTATCAGCTCGGTGGAGCCCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab