CircRNA Information

General Information
circRNA Basic Information
CircID chr17:76083027|76083273
Strand +
CircType exon
Host Gene ENSG00000186919.11;
Algorism CIRI2;
Sequence AGAGAACTCCCCTACAGCCCAGAGATGTGGCAGGGCTCAGAGAAGCAGCCAGAGCTCCTGGAGGAAAGGCAGTCGGGACTGACCCCCTCTCTTAAAACACATTCCCGCCCGCCCACAGGCCTGAGGTCTGGGACCTTTCCCTCCCAGGAGTCCCCTAGGTGGCTGGGGGAGGCAGGCTCACTGGCCATTTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:76083027|76083273 hsa-miR-149-5p 0 0 1
chr17:76083027|76083273 hsa-miR-149-3p 0 0 1
chr17:76083027|76083273 hsa-miR-206 0 0 1
chr17:76083027|76083273 hsa-miR-326 0 1 1
chr17:76083027|76083273 hsa-miR-422a 0 1 1
chr17:76083027|76083273 hsa-miR-596 0 0 1
chr17:76083027|76083273 hsa-miR-604 0 0 1
chr17:76083027|76083273 hsa-miR-612 0 0 1
chr17:76083027|76083273 hsa-miR-613 0 0 1
chr17:76083027|76083273 hsa-miR-614 0 0 1
chr17:76083027|76083273 hsa-miR-647 0 0 1
chr17:76083027|76083273 hsa-miR-648 0 1 1
chr17:76083027|76083273 hsa-miR-708-5p 0 0 1
chr17:76083027|76083273 hsa-miR-708-3p 0 0 1
chr17:76083027|76083273 hsa-miR-665 0 1 1
chr17:76083027|76083273 hsa-miR-942-5p 0 0 1
chr17:76083027|76083273 hsa-miR-942-3p 0 0 1
chr17:76083027|76083273 hsa-miR-1238-5p 0 0 1
chr17:76083027|76083273 hsa-miR-1238-3p 0 0 1
chr17:76083027|76083273 hsa-miR-1287-5p 0 0 1
chr17:76083027|76083273 hsa-miR-1287-3p 0 0 1
chr17:76083027|76083273 hsa-miR-1281 0 0 1
chr17:76083027|76083273 hsa-miR-1225-3p 0 0 1
chr17:76083027|76083273 hsa-miR-361-3p 0 0 1
chr17:76083027|76083273 hsa-miR-28-5p 0 0 1
chr17:76083027|76083273 hsa-miR-330-5p 0 1 1
chr17:76083027|76083273 hsa-miR-455-3p 0 0 1
chr17:76083027|76083273 hsa-miR-1233 0 0 1
chr17:76083027|76083273 hsa-miR-378 0 0 1
chr17:76083027|76083273 hsa-miR-1285 0 0 1
chr17:76083027|76083273 hsa-miR-1 0 0 1
chr17:76083027|76083273 hsa-miR-608 1 1 0
chr17:76083027|76083273 hsa-miR-663a 1 0 0
chr17:76083027|76083273 hsa-miR-892b 0 1 0
chr17:76083027|76083273 hsa-miR-760 1 0 0
chr17:76083027|76083273 hsa-miR-1293 1 0 0
chr17:76083027|76083273 hsa-miR-2110 1 1 0
chr17:76083027|76083273 hsa-miR-2861 1 0 0
chr17:76083027|76083273 hsa-miR-3141 1 0 0
chr17:76083027|76083273 hsa-miR-4253 1 0 0
chr17:76083027|76083273 hsa-miR-3621 1 0 0
chr17:76083027|76083273 hsa-miR-3921 0 1 0
chr17:76083027|76083273 hsa-miR-378h 0 1 0
chr17:76083027|76083273 hsa-miR-4488 1 0 0
chr17:76083027|76083273 hsa-miR-4498 1 0 0
chr17:76083027|76083273 hsa-miR-1587 1 1 0
chr17:76083027|76083273 hsa-miR-4651 1 0 0
chr17:76083027|76083273 hsa-miR-4706 1 0 0
chr17:76083027|76083273 hsa-miR-4741 0 1 0
chr17:76083027|76083273 hsa-miR-4767 1 0 0
chr17:76083027|76083273 hsa-miR-5193 0 1 0
chr17:76083027|76083273 hsa-miR-6127 1 0 0
chr17:76083027|76083273 hsa-miR-8052 1 0 0
chr17:76083027|76083273 hsa-miR-103a-2-5p 0 1 0
chr17:76083027|76083273 hsa-miR-92a-1-5p 1 0 0
chr17:76083027|76083273 hsa-miR-6747-3p 0 1 0
chr17:76083027|76083273 hsa-miR-6836-3p 1 1 0
chr17:76083027|76083273 hsa-miR-6825-5p 1 0 0
chr17:76083027|76083273 hsa-miR-6857-5p 1 0 0
chr17:76083027|76083273 hsa-miR-6822-3p 1 0 0
chr17:76083027|76083273 hsa-miR-1233-3p 0 1 0
chr17:76083027|76083273 hsa-miR-7851-3p 0 1 0
chr17:76083027|76083273 hsa-miR-6746-5p 1 0 0
chr17:76083027|76083273 hsa-miR-3064-5p 0 1 0
chr17:76083027|76083273 hsa-miR-6762-3p 0 1 0
chr17:76083027|76083273 hsa-miR-6759-5p 1 1 0
chr17:76083027|76083273 hsa-miR-6783-5p 0 1 0
chr17:76083027|76083273 hsa-miR-6742-5p 1 1 0
chr17:76083027|76083273 hsa-miR-6716-5p 1 1 0
chr17:76083027|76083273 hsa-miR-3180-3p 1 1 0
chr17:76083027|76083273 hsa-miR-6748-5p 1 1 0
chr17:76083027|76083273 hsa-miR-4697-3p 0 1 0
chr17:76083027|76083273 hsa-miR-6805-5p 1 0 0
chr17:76083027|76083273 hsa-miR-3194-5p 1 1 0
chr17:76083027|76083273 hsa-miR-30b-3p 0 1 0
chr17:76083027|76083273 hsa-miR-6735-3p 1 1 0
chr17:76083027|76083273 hsa-miR-6882-3p 0 1 0
chr17:76083027|76083273 hsa-miR-6786-5p 1 0 0
chr17:76083027|76083273 hsa-miR-5001-3p 0 1 0
chr17:76083027|76083273 hsa-miR-1908-5p 1 0 0
chr17:76083027|76083273 hsa-miR-1228-5p 1 1 0
chr17:76083027|76083273 hsa-miR-6749-5p 1 1 0
chr17:76083027|76083273 hsa-miR-425-3p 1 0 0
chr17:76083027|76083273 hsa-miR-6824-5p 0 1 0
chr17:76083027|76083273 hsa-miR-6789-5p 1 0 0
chr17:76083027|76083273 hsa-miR-7156-3p 1 0 0
chr17:76083027|76083273 hsa-miR-6781-5p 1 0 0
chr17:76083027|76083273 hsa-miR-3191-3p 1 0 0
chr17:76083027|76083273 hsa-miR-660-3p 0 1 0
chr17:76083027|76083273 hsa-miR-4750-5p 1 0 0
chr17:76083027|76083273 hsa-miR-6773-3p 0 1 0
chr17:76083027|76083273 hsa-miR-2277-5p 1 0 0
chr17:76083027|76083273 hsa-miR-3173-5p 0 1 0
chr17:76083027|76083273 hsa-miR-6779-3p 0 1 0
chr17:76083027|76083273 hsa-miR-1207-5p 1 0 0
chr17:76083027|76083273 hsa-miR-1273h-5p 0 1 0
chr17:76083027|76083273 hsa-miR-6769b-5p 1 0 0
chr17:76083027|76083273 hsa-miR-6787-5p 1 0 0
chr17:76083027|76083273 hsa-miR-6816-5p 1 1 0
chr17:76083027|76083273 hsa-miR-3180 1 1 0
chr17:76083027|76083273 hsa-miR-5001-5p 1 0 0
chr17:76083027|76083273 hsa-miR-6737-5p 1 0 0
chr17:76083027|76083273 hsa-miR-6756-5p 1 1 0
chr17:76083027|76083273 hsa-miR-6769a-5p 1 0 0
chr17:76083027|76083273 hsa-miR-6803-5p 1 0 0
chr17:76083027|76083273 hsa-miR-6819-5p 1 0 0
chr17:76083027|76083273 hsa-miR-6842-5p 1 0 0
chr17:76083027|76083273 hsa-miR-10401-5p 1 0 0
chr17:76083027|76083273 hsa-miR-6779-5p 0 1 0
chr17:76083027|76083273 hsa-miR-6780a-5p 1 1 0
chr17:76083027|76083273 hsa-miR-6797-5p 1 1 0
chr17:76083027|76083273 hsa-miR-3127-3p 1 0 0
chr17:76083027|76083273 hsa-miR-3620-5p 1 0 0
chr17:76083027|76083273 hsa-miR-4728-5p 0 1 0
chr17:76083027|76083273 hsa-miR-10396b-5p 1 0 0
chr17:76083027|76083273 hsa-miR-1237-5p 1 0 0
chr17:76083027|76083273 hsa-miR-328-5p 1 0 0
chr17:76083027|76083273 hsa-miR-4745-5p 1 0 0
chr17:76083027|76083273 hsa-miR-6848-5p 1 0 0
chr17:76083027|76083273 hsa-miR-6883-5p 0 1 0
chr17:76083027|76083273 hsa-miR-939-5p 1 0 0
chr17:76083027|76083273 hsa-miR-10394-3p 1 0 0
chr17:76083027|76083273 hsa-miR-365a-5p 1 1 0
chr17:76083027|76083273 hsa-miR-6758-5p 0 1 0
chr17:76083027|76083273 hsa-miR-6856-5p 0 1 0
chr17:76083027|76083273 hsa-miR-1199-5p 0 1 0
chr17:76083027|76083273 hsa-miR-4700-5p 0 1 0
chr17:76083027|76083273 hsa-miR-541-3p 1 0 0
chr17:76083027|76083273 hsa-miR-6750-5p 1 0 0
chr17:76083027|76083273 hsa-miR-6766-5p 1 1 0
chr17:76083027|76083273 hsa-miR-6785-5p 1 0 0
chr17:76083027|76083273 hsa-miR-6790-5p 1 0 0
chr17:76083027|76083273 hsa-miR-6724-5p 1 0 0
chr17:76083027|76083273 hsa-miR-4722-3p 0 1 0
chr17:76083027|76083273 hsa-miR-6727-3p 0 1 0
chr17:76083027|76083273 hsa-miR-6792-3p 0 1 0
chr17:76083027|76083273 hsa-miR-6801-3p 0 1 0
chr17:76083027|76083273 hsa-miR-6829-3p 0 1 0
chr17:76083027|76083273 hsa-miR-6751-3p 0 1 0
chr17:76083027|76083273 hsa-miR-3085-3p 0 1 0
chr17:76083027|76083273 hsa-miR-4756-5p 0 1 0
chr17:76083027|76083273 hsa-miR-1295b-5p 0 1 0
chr17:76083027|76083273 hsa-miR-4691-5p 1 1 0
chr17:76083027|76083273 hsa-miR-103a-1-5p 0 1 0
chr17:76083027|76083273 hsa-miR-3059-3p 1 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:76083027|76083273
ORF Type ORF1
Protein Length 74
Nucleotide Length 222
Protein Sequence MWQGSEKQPELLEERQSGLTPSLKTHSRPPTGLRSGTFPSQESPRWLGEAGSLAIFPRVQHTAGGVRRRSSAPP
Nucleotide Sequence ATGTGGCAGGGCTCAGAGAAGCAGCCAGAGCTCCTGGAGGAAAGGCAGTCGGGACTGACCCCCTCTCTTAAAACACATTCCCGCCCGCCCACAGGCCTGAGGTCTGGGACCTTTCCCTCCCAGGAGTCCCCTAGGTGGCTGGGGGAGGCAGGCTCACTGGCCATTTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACCC
CircID chr17:76083027|76083273
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MGPFPPRSPLGGWGRQAHWPFSLESSTLQEAFGGGVPPHP
Nucleotide Sequence CTGGGACCTTTCCCTCCCAGGAGTCCCCTAGGTGGCTGGGGGAGGCAGGCTCACTGGCCATTTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACCCT
CircID chr17:76083027|76083273
ORF Type ORF3
Protein Length 36
Nucleotide Length 111
Protein Sequence MGGKGPRPQACGRAGMCFKRGGQSRLPFLQELWLLL
Nucleotide Sequence CTGGGAGGGAAAGGTCCCAGACCTCAGGCCTGTGGGCGGGCGGGAATGTGTTTTAAGAGAGGGGGTCAGTCCCGACTGCCTTTCCTCCAGGAGCTCTGGCTGCTTCTCTGA
CircID chr17:76083027|76083273
ORF Type ORF4
Protein Length 58
Nucleotide Length 177
Protein Sequence MASEPASPSHLGDSWEGKVPDLRPVGGRECVLREGVSPDCLSSRSSGCFSEPCHISGL
Nucleotide Sequence ATGGCCAGTGAGCCTGCCTCCCCCAGCCACCTAGGGGACTCCTGGGAGGGAAAGGTCCCAGACCTCAGGCCTGTGGGCGGGCGGGAATGTGTTTTAAGAGAGGGGGTCAGTCCCGACTGCCTTTCCTCCAGGAGCTCTGGCTGCTTCTCTGAGCCCTGCCACATCTCTGGGCTGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab