CircRNA Information

General Information
circRNA Basic Information
CircID chr17:76084027|76084280
Strand +
CircType exon
Host Gene ENSG00000182473.19;
Algorism CIRI2;
Sequence AAGGAGCGGCAGATTATCAAGGAGCGTTTTAAGGTGAGTCGGGGTCCTCTCCCCTCCACTGCTTGCTGCTGCTGTTGAGGCAACACAGACCCAAAATGTTTGTCTCTGGGTGCCTTCCTTTTTCACCTTTTTGGTGGCCAGGGCTTCAATGATGGCCTCGAAGAACTGTGCAAAATCCAGAAGGCCTGGGCTATTCCAGACACAGAGCAGAGGGACAGGATTCGCCAGGCCCAGAAGACCATTGTCAAGGAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:76084027|76084280 hsa-miR-15a-5p 0 0 1
chr17:76084027|76084280 hsa-miR-15a-3p 0 0 1
chr17:76084027|76084280 hsa-miR-15b-5p 0 0 1
chr17:76084027|76084280 hsa-miR-15b-3p 0 0 1
chr17:76084027|76084280 hsa-miR-195-5p 0 0 1
chr17:76084027|76084280 hsa-miR-195-3p 0 0 1
chr17:76084027|76084280 hsa-miR-424-5p 0 0 1
chr17:76084027|76084280 hsa-miR-424-3p 0 0 1
chr17:76084027|76084280 hsa-miR-497-5p 0 0 1
chr17:76084027|76084280 hsa-miR-497-3p 0 0 1
chr17:76084027|76084280 hsa-miR-506-5p 0 0 1
chr17:76084027|76084280 hsa-miR-506-3p 0 0 1
chr17:76084027|76084280 hsa-miR-507 0 0 1
chr17:76084027|76084280 hsa-miR-557 1 0 1
chr17:76084027|76084280 hsa-miR-588 0 1 1
chr17:76084027|76084280 hsa-miR-612 0 0 1
chr17:76084027|76084280 hsa-miR-421 0 0 1
chr17:76084027|76084280 hsa-miR-1231 0 0 1
chr17:76084027|76084280 hsa-miR-1237-5p 0 0 1
chr17:76084027|76084280 hsa-miR-1237-3p 0 0 1
chr17:76084027|76084280 hsa-miR-1290 0 0 1
chr17:76084027|76084280 hsa-miR-1299 0 0 1
chr17:76084027|76084280 hsa-miR-127-5p 0 0 1
chr17:76084027|76084280 hsa-miR-193a-5p 0 0 1
chr17:76084027|76084280 hsa-miR-767-3p 0 0 1
chr17:76084027|76084280 hsa-miR-875-3p 0 0 1
chr17:76084027|76084280 hsa-miR-876-5p 0 0 1
chr17:76084027|76084280 hsa-miR-450b-5p 0 0 1
chr17:76084027|76084280 hsa-miR-642 0 0 1
chr17:76084027|76084280 hsa-miR-16 0 0 1
chr17:76084027|76084280 hsa-miR-124 0 0 1
chr17:76084027|76084280 hsa-miR-1285 0 0 1
chr17:76084027|76084280 hsa-miR-516b 0 0 1
chr17:76084027|76084280 hsa-miR-583 0 1 0
chr17:76084027|76084280 hsa-miR-2861 0 1 0
chr17:76084027|76084280 hsa-miR-3175 0 1 0
chr17:76084027|76084280 hsa-miR-4326 1 0 0
chr17:76084027|76084280 hsa-miR-3612 0 1 0
chr17:76084027|76084280 hsa-miR-3651 0 1 0
chr17:76084027|76084280 hsa-miR-4476 1 1 0
chr17:76084027|76084280 hsa-miR-4488 1 0 0
chr17:76084027|76084280 hsa-miR-4751 0 1 0
chr17:76084027|76084280 hsa-miR-378j 0 1 0
chr17:76084027|76084280 hsa-miR-8085 0 1 0
chr17:76084027|76084280 hsa-miR-12115 0 1 0
chr17:76084027|76084280 hsa-miR-22-5p 0 1 0
chr17:76084027|76084280 hsa-miR-500b-3p 0 1 0
chr17:76084027|76084280 hsa-miR-6515-5p 0 1 0
chr17:76084027|76084280 hsa-miR-6880-5p 1 1 0
chr17:76084027|76084280 hsa-miR-7847-3p 0 1 0
chr17:76084027|76084280 hsa-miR-512-3p 1 0 0
chr17:76084027|76084280 hsa-miR-185-3p 1 0 0
chr17:76084027|76084280 hsa-miR-6868-3p 1 0 0
chr17:76084027|76084280 hsa-miR-6728-3p 1 1 0
chr17:76084027|76084280 hsa-miR-6774-3p 1 0 0
chr17:76084027|76084280 hsa-miR-6735-3p 1 0 0
chr17:76084027|76084280 hsa-miR-7109-5p 1 1 0
chr17:76084027|76084280 hsa-miR-1226-5p 1 0 0
chr17:76084027|76084280 hsa-miR-1247-5p 1 0 0
chr17:76084027|76084280 hsa-miR-1266-3p 1 0 0
chr17:76084027|76084280 hsa-miR-7843-3p 0 1 0
chr17:76084027|76084280 hsa-miR-339-5p 1 0 0
chr17:76084027|76084280 hsa-miR-4646-3p 1 0 0
chr17:76084027|76084280 hsa-miR-1910-5p 1 0 0
chr17:76084027|76084280 hsa-miR-6895-3p 1 0 0
chr17:76084027|76084280 hsa-miR-1296-5p 1 0 0
chr17:76084027|76084280 hsa-miR-605-3p 0 1 0
chr17:76084027|76084280 hsa-miR-4529-5p 0 1 0
chr17:76084027|76084280 hsa-miR-1914-5p 1 0 0
chr17:76084027|76084280 hsa-miR-6748-3p 1 1 0
chr17:76084027|76084280 hsa-miR-642a-5p 0 1 0
chr17:76084027|76084280 hsa-miR-329-5p 1 0 0
chr17:76084027|76084280 hsa-miR-6732-3p 1 0 0
chr17:76084027|76084280 hsa-miR-16-5p 0 1 0
chr17:76084027|76084280 hsa-miR-124-3p 0 1 0
chr17:76084027|76084280 hsa-miR-1343-5p 1 0 0
chr17:76084027|76084280 hsa-miR-1249-5p 1 0 0
chr17:76084027|76084280 hsa-miR-7111-5p 1 0 0
chr17:76084027|76084280 hsa-miR-4728-5p 1 1 0
chr17:76084027|76084280 hsa-miR-6856-5p 1 0 0
chr17:76084027|76084280 hsa-miR-6876-5p 0 1 0
chr17:76084027|76084280 hsa-miR-6753-3p 0 1 0
chr17:76084027|76084280 hsa-miR-6862-3p 1 0 0
chr17:76084027|76084280 hsa-miR-10392-3p 1 0 0
chr17:76084027|76084280 hsa-miR-6511b-3p 1 0 0
chr17:76084027|76084280 hsa-miR-4701-5p 0 1 0
chr17:76084027|76084280 hsa-miR-6827-3p 1 0 0
chr17:76084027|76084280 hsa-miR-6838-5p 0 1 0
chr17:76084027|76084280 hsa-miR-5699-3p 1 0 0
chr17:76084027|76084280 hsa-miR-1912-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:76084027|76084280
ORF Type ORF1
Protein Length 51
Nucleotide Length 153
Protein Sequence MSLGAFLFHLFGGQGFNDGLEELCKIQKAWAIPDTEQRDRIRQAQKTIVKE
Nucleotide Sequence TTGTCTCTGGGTGCCTTCCTTTTTCACCTTTTTGGTGGCCAGGGCTTCAATGATGGCCTCGAAGAACTGTGCAAAATCCAGAAGGCCTGGGCTATTCCAGACACAGAGCAGAGGGACAGGATTCGCCAGGCCCAGAAGACCATTGTCAAGGAG

CircID chr17:76084027|76084280
ORF Type ORF2
Protein Length 65
Nucleotide Length 195
Protein Sequence MLAAAVEATQTQNVCLWVPSFFTFLVARASMMASKNCAKSRRPGLFQTQSRGTGFARPRRPLSRR
Nucleotide Sequence CTGCTTGCTGCTGCTGTTGAGGCAACACAGACCCAAAATGTTTGTCTCTGGGTGCCTTCCTTTTTCACCTTTTTGGTGGCCAGGGCTTCAATGATGGCCTCGAAGAACTGTGCAAAATCCAGAAGGCCTGGGCTATTCCAGACACAGAGCAGAGGGACAGGATTCGCCAGGCCCAGAAGACCATTGTCAAGGAGA

CircID chr17:76084027|76084280
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MLLLLRQHRPKMFVSGCLPFSPFWWPGLQ
Nucleotide Sequence TTGCTGCTGCTGTTGAGGCAACACAGACCCAAAATGTTTGTCTCTGGGTGCCTTCCTTTTTCACCTTTTTGGTGGCCAGGGCTTCAATGA

CircID chr17:76084027|76084280
ORF Type ORF4
Protein Length 41
Nucleotide Length 126
Protein Sequence MTMVFWAWRILSLCSVSGIAQAFWILHSSSRPSLKPWPPKR
Nucleotide Sequence TTGACAATGGTCTTCTGGGCCTGGCGAATCCTGTCCCTCTGCTCTGTGTCTGGAATAGCCCAGGCCTTCTGGATTTTGCACAGTTCTTCGAGGCCATCATTGAAGCCCTGGCCACCAAAAAGGTGA

CircID chr17:76084027|76084280
ORF Type ORF5
Protein Length 27
Nucleotide Length 81
Protein Sequence MPQQQQQAVEGRGPRLTLKRSLIICRS
Nucleotide Sequence TTGCCTCAACAGCAGCAGCAAGCAGTGGAGGGGAGAGGACCCCGACTCACCTTAAAACGCTCCTTGATAATCTGCCGCTCC

CircID chr17:76084027|76084280
ORF Type ORF6
Protein Length 78
Nucleotide Length 234
Protein Sequence MGLANPVPLLCVWNSPGLLDFAQFFEAIIEALATKKVKKEGTQRQTFWVCVASTAAASSGGERTPTHLKTLLDNLPLL
Nucleotide Sequence CTGGGCCTGGCGAATCCTGTCCCTCTGCTCTGTGTCTGGAATAGCCCAGGCCTTCTGGATTTTGCACAGTTCTTCGAGGCCATCATTGAAGCCCTGGCCACCAAAAAGGTGAAAAAGGAAGGCACCCAGAGACAAACATTTTGGGTCTGTGTTGCCTCAACAGCAGCAGCAAGCAGTGGAGGGGAGAGGACCCCGACTCACCTTAAAACGCTCCTTGATAATCTGCCGCTCCTT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites