CircRNA Information

General Information
circRNA Basic Information
CircID chr17:76387019|76387142
Strand -
CircType exon
Host Gene ENSG00000176170.12;
Algorism CIRI2;
Sequence CTTCCTGCGTCTGGCAGCCCTGCGCACCTACCGCGGCCGACTGGCCTACCTCCCTGTAGGAAGAGTGGGTTCCAAGACACCTGCCTCCCCCGTTGTGGTCCAGCAGGGCCCGGTAGATGCACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:76387019|76387142 hsa-let-7b-5p 0 0 1
chr17:76387019|76387142 hsa-let-7b-3p 0 0 1
chr17:76387019|76387142 hsa-let-7c-5p 0 0 1
chr17:76387019|76387142 hsa-let-7c-3p 0 0 1
chr17:76387019|76387142 hsa-let-7d-5p 0 0 1
chr17:76387019|76387142 hsa-let-7d-3p 0 0 1
chr17:76387019|76387142 hsa-let-7e-5p 0 0 1
chr17:76387019|76387142 hsa-let-7e-3p 0 0 1
chr17:76387019|76387142 hsa-miR-98-5p 0 0 1
chr17:76387019|76387142 hsa-miR-98-3p 0 0 1
chr17:76387019|76387142 hsa-let-7g-5p 0 0 1
chr17:76387019|76387142 hsa-let-7g-3p 0 0 1
chr17:76387019|76387142 hsa-let-7i-5p 0 0 1
chr17:76387019|76387142 hsa-let-7i-3p 0 0 1
chr17:76387019|76387142 hsa-miR-370-5p 0 0 1
chr17:76387019|76387142 hsa-miR-370-3p 0 0 1
chr17:76387019|76387142 hsa-miR-431-5p 0 0 1
chr17:76387019|76387142 hsa-miR-431-3p 0 0 1
chr17:76387019|76387142 hsa-miR-432-5p 0 0 1
chr17:76387019|76387142 hsa-miR-432-3p 0 0 1
chr17:76387019|76387142 hsa-miR-650 1 1 1
chr17:76387019|76387142 hsa-miR-933 1 1 1
chr17:76387019|76387142 hsa-miR-940 0 0 1
chr17:76387019|76387142 hsa-miR-1236-5p 0 0 1
chr17:76387019|76387142 hsa-miR-1236-3p 0 0 1
chr17:76387019|76387142 hsa-miR-1287-5p 0 0 1
chr17:76387019|76387142 hsa-miR-1287-3p 0 0 1
chr17:76387019|76387142 hsa-miR-1291 0 1 1
chr17:76387019|76387142 hsa-miR-1321 0 0 1
chr17:76387019|76387142 hsa-miR-1827 0 0 1
chr17:76387019|76387142 hsa-let-7a 0 0 1
chr17:76387019|76387142 hsa-let-7f 0 0 1
chr17:76387019|76387142 hsa-miR-648 1 0 0
chr17:76387019|76387142 hsa-miR-663a 1 0 0
chr17:76387019|76387142 hsa-miR-3196 1 0 0
chr17:76387019|76387142 hsa-miR-4270 0 1 0
chr17:76387019|76387142 hsa-miR-3612 0 1 0
chr17:76387019|76387142 hsa-miR-4458 0 1 0
chr17:76387019|76387142 hsa-miR-4505 1 0 0
chr17:76387019|76387142 hsa-miR-4651 1 0 0
chr17:76387019|76387142 hsa-miR-4736 0 1 0
chr17:76387019|76387142 hsa-miR-4739 1 1 0
chr17:76387019|76387142 hsa-miR-5698 1 1 0
chr17:76387019|76387142 hsa-miR-6132 0 1 0
chr17:76387019|76387142 hsa-miR-8072 1 0 0
chr17:76387019|76387142 hsa-miR-504-3p 1 0 0
chr17:76387019|76387142 hsa-miR-4665-3p 1 1 0
chr17:76387019|76387142 hsa-miR-6765-5p 1 0 0
chr17:76387019|76387142 hsa-miR-7106-5p 1 0 0
chr17:76387019|76387142 hsa-miR-6825-5p 1 1 0
chr17:76387019|76387142 hsa-miR-6799-5p 1 1 0
chr17:76387019|76387142 hsa-miR-3692-5p 0 1 0
chr17:76387019|76387142 hsa-miR-6089 1 0 0
chr17:76387019|76387142 hsa-miR-6721-5p 1 0 0
chr17:76387019|76387142 hsa-miR-4655-5p 1 0 0
chr17:76387019|76387142 hsa-miR-6748-5p 0 1 0
chr17:76387019|76387142 hsa-miR-6829-5p 0 1 0
chr17:76387019|76387142 hsa-miR-6798-5p 0 1 0
chr17:76387019|76387142 hsa-miR-5006-5p 0 1 0
chr17:76387019|76387142 hsa-miR-6786-5p 1 0 0
chr17:76387019|76387142 hsa-miR-3648 0 1 0
chr17:76387019|76387142 hsa-miR-4787-5p 1 0 0
chr17:76387019|76387142 hsa-miR-4446-3p 0 1 0
chr17:76387019|76387142 hsa-miR-6824-5p 1 0 0
chr17:76387019|76387142 hsa-miR-6789-5p 1 0 0
chr17:76387019|76387142 hsa-miR-4776-5p 1 1 0
chr17:76387019|76387142 hsa-miR-2277-5p 1 0 0
chr17:76387019|76387142 hsa-miR-1207-5p 1 0 0
chr17:76387019|76387142 hsa-miR-1233-5p 1 0 0
chr17:76387019|76387142 hsa-miR-4763-3p 1 0 0
chr17:76387019|76387142 hsa-miR-6778-5p 1 0 0
chr17:76387019|76387142 hsa-miR-6816-5p 1 0 0
chr17:76387019|76387142 hsa-miR-6870-5p 1 1 0
chr17:76387019|76387142 hsa-miR-6893-5p 1 1 0
chr17:76387019|76387142 hsa-miR-1343-5p 1 0 0
chr17:76387019|76387142 hsa-miR-6743-5p 1 0 0
chr17:76387019|76387142 hsa-miR-6752-5p 1 0 0
chr17:76387019|76387142 hsa-miR-6754-5p 0 1 0
chr17:76387019|76387142 hsa-miR-6756-5p 1 0 0
chr17:76387019|76387142 hsa-miR-6803-5p 1 0 0
chr17:76387019|76387142 hsa-miR-1249-5p 1 0 0
chr17:76387019|76387142 hsa-miR-6722-3p 1 0 0
chr17:76387019|76387142 hsa-miR-6751-5p 1 0 0
chr17:76387019|76387142 hsa-miR-6808-5p 1 1 0
chr17:76387019|76387142 hsa-miR-7111-5p 1 1 0
chr17:76387019|76387142 hsa-miR-6780b-5p 1 0 0
chr17:76387019|76387142 hsa-miR-6836-5p 1 1 0
chr17:76387019|76387142 hsa-miR-328-5p 1 0 0
chr17:76387019|76387142 hsa-miR-4725-3p 1 0 0
chr17:76387019|76387142 hsa-miR-6777-5p 1 0 0
chr17:76387019|76387142 hsa-miR-4723-5p 0 1 0
chr17:76387019|76387142 hsa-miR-10394-3p 1 0 0
chr17:76387019|76387142 hsa-miR-6799-3p 0 1 0
chr17:76387019|76387142 hsa-miR-6724-5p 1 0 0
chr17:76387019|76387142 hsa-miR-4756-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:76387019|76387142
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MRLAALRTYRGRLAYLPVGRVGSKTPASPVVVQQGPVDAH
Nucleotide Sequence CTGCGTCTGGCAGCCCTGCGCACCTACCGCGGCCGACTGGCCTACCTCCCTGTAGGAAGAGTGGGTTCCAAGACACCTGCCTCCCCCGTTGTGGTCCAGCAGGGCCCGGTAGATGCACAC
CircID chr17:76387019|76387142
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MLDHNGGGRCLGTHSSYREVGQSAAVGAQGCQTQE
Nucleotide Sequence CTGCTGGACCACAACGGGGGAGGCAGGTGTCTTGGAACCCACTCTTCCTACAGGGAGGTAGGCCAGTCGGCCGCGGTAGGTGCGCAGGGCTGCCAGACGCAGGAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab