CircRNA Information

General Information
circRNA Basic Information
CircID chr17:77402513|77402625
Strand -
CircType exon
Host Gene ENSG00000184640.16;
Algorism CIRI2;
Sequence TGCCCCTGCCACCGACGCAGCCCCCAAGAGGGTGGAGATCCAGATGCCCAAGCCTGCTGAGGCGCCCACCGCCCCCAGCCCAGCCCAGACCTTGGAGAATTCAGAGCCTGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:77402513|77402625 hsa-miR-214-5p 0 0 1
chr17:77402513|77402625 hsa-miR-214-3p 0 0 1
chr17:77402513|77402625 hsa-miR-484 0 0 1
chr17:77402513|77402625 hsa-miR-604 1 0 1
chr17:77402513|77402625 hsa-miR-612 1 0 1
chr17:77402513|77402625 hsa-miR-635 0 0 1
chr17:77402513|77402625 hsa-miR-637 1 0 1
chr17:77402513|77402625 hsa-miR-541-5p 0 0 1
chr17:77402513|77402625 hsa-miR-541-3p 0 0 1
chr17:77402513|77402625 hsa-miR-760 1 0 1
chr17:77402513|77402625 hsa-miR-922 0 0 1
chr17:77402513|77402625 hsa-miR-1275 0 0 1
chr17:77402513|77402625 hsa-miR-654-5p 0 0 1
chr17:77402513|77402625 hsa-miR-566 0 0 1
chr17:77402513|77402625 hsa-miR-1207-5p 1 0 1
chr17:77402513|77402625 hsa-miR-515-5p 0 0 1
chr17:77402513|77402625 hsa-miR-1285 0 0 1
chr17:77402513|77402625 hsa-miR-657 1 0 0
chr17:77402513|77402625 hsa-miR-762 1 0 0
chr17:77402513|77402625 hsa-miR-2861 1 0 0
chr17:77402513|77402625 hsa-miR-3147 1 0 0
chr17:77402513|77402625 hsa-miR-3196 1 0 0
chr17:77402513|77402625 hsa-miR-4486 1 0 0
chr17:77402513|77402625 hsa-miR-4488 1 0 0
chr17:77402513|77402625 hsa-miR-4489 1 0 0
chr17:77402513|77402625 hsa-miR-4492 1 0 0
chr17:77402513|77402625 hsa-miR-4498 1 0 0
chr17:77402513|77402625 hsa-miR-4505 1 0 0
chr17:77402513|77402625 hsa-miR-4507 1 0 0
chr17:77402513|77402625 hsa-miR-4508 1 0 0
chr17:77402513|77402625 hsa-miR-1587 1 0 0
chr17:77402513|77402625 hsa-miR-4651 1 0 0
chr17:77402513|77402625 hsa-miR-4656 1 0 0
chr17:77402513|77402625 hsa-miR-4675 1 0 0
chr17:77402513|77402625 hsa-miR-4736 1 0 0
chr17:77402513|77402625 hsa-miR-4741 1 0 0
chr17:77402513|77402625 hsa-miR-5572 1 0 0
chr17:77402513|77402625 hsa-miR-5787 1 0 0
chr17:77402513|77402625 hsa-miR-6085 1 0 0
chr17:77402513|77402625 hsa-miR-6132 1 0 0
chr17:77402513|77402625 hsa-miR-6860 1 0 0
chr17:77402513|77402625 hsa-miR-9899 1 0 0
chr17:77402513|77402625 hsa-miR-6747-5p 1 0 0
chr17:77402513|77402625 hsa-miR-6861-5p 1 0 0
chr17:77402513|77402625 hsa-miR-3180-3p 1 0 0
chr17:77402513|77402625 hsa-miR-6829-5p 1 0 0
chr17:77402513|77402625 hsa-miR-6732-5p 1 0 0
chr17:77402513|77402625 hsa-miR-6782-5p 1 0 0
chr17:77402513|77402625 hsa-miR-6786-5p 1 0 0
chr17:77402513|77402625 hsa-miR-3944-3p 1 0 0
chr17:77402513|77402625 hsa-miR-1229-5p 1 0 0
chr17:77402513|77402625 hsa-miR-1228-5p 1 0 0
chr17:77402513|77402625 hsa-miR-296-3p 1 0 0
chr17:77402513|77402625 hsa-miR-4690-5p 1 0 0
chr17:77402513|77402625 hsa-miR-6823-5p 1 0 0
chr17:77402513|77402625 hsa-miR-4787-5p 1 0 0
chr17:77402513|77402625 hsa-miR-4446-3p 1 0 0
chr17:77402513|77402625 hsa-miR-6789-5p 1 0 0
chr17:77402513|77402625 hsa-miR-10400-5p 1 0 0
chr17:77402513|77402625 hsa-miR-4763-3p 1 0 0
chr17:77402513|77402625 hsa-miR-5001-5p 1 0 0
chr17:77402513|77402625 hsa-miR-6752-5p 1 0 0
chr17:77402513|77402625 hsa-miR-6756-5p 1 0 0
chr17:77402513|77402625 hsa-miR-6803-5p 1 0 0
chr17:77402513|77402625 hsa-miR-6813-5p 1 0 0
chr17:77402513|77402625 hsa-miR-6819-5p 1 0 0
chr17:77402513|77402625 hsa-miR-6751-5p 1 0 0
chr17:77402513|77402625 hsa-miR-3620-5p 1 0 0
chr17:77402513|77402625 hsa-miR-5189-5p 1 0 0
chr17:77402513|77402625 hsa-miR-1237-5p 1 0 0
chr17:77402513|77402625 hsa-miR-6846-5p 1 0 0
chr17:77402513|77402625 hsa-miR-6848-5p 1 0 0
chr17:77402513|77402625 hsa-miR-3940-5p 1 0 0
chr17:77402513|77402625 hsa-miR-10400-3p 1 0 0
chr17:77402513|77402625 hsa-miR-33b-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:77402513|77402625
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MPPTQPPRGWRSRCPSLLRRPPPPAQPRPWRIQSLP
Nucleotide Sequence CTGCCACCGACGCAGCCCCCAAGAGGGTGGAGATCCAGATGCCCAAGCCTGCTGAGGCGCCCACCGCCCCCAGCCCAGCCCAGACCTTGGAGAATTCAGAGCCTGCCC
CircID chr17:77402513|77402625
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MNSPRSGLGWGRWAPQQAWASGSPPSWGLRRWQG
Nucleotide Sequence CTGAATTCTCCAAGGTCTGGGCTGGGCTGGGGGCGGTGGGCGCCTCAGCAGGCTTGGGCATCTGGATCTCCACCCTCTTGGGGGCTGCGTCGGTGGCAGGGG
CircID chr17:77402513|77402625
ORF Type ORF3
Protein Length 29
Nucleotide Length 87
Protein Sequence MGWAGGGGRLSRLGHLDLHPLGGCVGGRG
Nucleotide Sequence CTGGGCTGGGCTGGGGGCGGTGGGCGCCTCAGCAGGCTTGGGCATCTGGATCTCCACCCTCTTGGGGGCTGCGTCGGTGGCAGGGGC
CircID chr17:77402513|77402625
ORF Type ORF4
Protein Length 26
Nucleotide Length 78
Protein Sequence MGAVGASAGLGIWISTLLGAASVAGA
Nucleotide Sequence CTGGGGGCGGTGGGCGCCTCAGCAGGCTTGGGCATCTGGATCTCCACCCTCTTGGGGGCTGCGTCGGTGGCAGGGGCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab