CircRNA Information

General Information
circRNA Basic Information
CircID chr17:77498729|77498901
Strand -
CircType exon
Host Gene ENSG00000184640.16;
Algorism CIRI2;
Sequence CCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCCTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:77498729|77498901 hsa-miR-107 0 1 1
chr17:77498729|77498901 hsa-miR-148a-5p 0 0 1
chr17:77498729|77498901 hsa-miR-148a-3p 0 0 1
chr17:77498729|77498901 hsa-miR-204-5p 0 0 1
chr17:77498729|77498901 hsa-miR-204-3p 0 0 1
chr17:77498729|77498901 hsa-miR-211-5p 0 0 1
chr17:77498729|77498901 hsa-miR-211-3p 0 0 1
chr17:77498729|77498901 hsa-miR-152-5p 0 0 1
chr17:77498729|77498901 hsa-miR-152-3p 0 0 1
chr17:77498729|77498901 hsa-miR-148b-5p 0 0 1
chr17:77498729|77498901 hsa-miR-148b-3p 0 0 1
chr17:77498729|77498901 hsa-miR-345-5p 0 0 1
chr17:77498729|77498901 hsa-miR-345-3p 0 0 1
chr17:77498729|77498901 hsa-miR-608 1 1 1
chr17:77498729|77498901 hsa-miR-623 0 0 1
chr17:77498729|77498901 hsa-miR-1229-5p 0 0 1
chr17:77498729|77498901 hsa-miR-1229-3p 0 0 1
chr17:77498729|77498901 hsa-miR-1292-5p 0 0 1
chr17:77498729|77498901 hsa-miR-1292-3p 0 0 1
chr17:77498729|77498901 hsa-miR-1321 0 0 1
chr17:77498729|77498901 hsa-miR-1825 0 1 1
chr17:77498729|77498901 hsa-miR-491-5p 0 1 1
chr17:77498729|77498901 hsa-miR-542-5p 0 0 1
chr17:77498729|77498901 hsa-miR-885-3p 1 0 1
chr17:77498729|77498901 hsa-miR-199a-5p 0 0 1
chr17:77498729|77498901 hsa-miR-199b-5p 0 0 1
chr17:77498729|77498901 hsa-miR-103 0 0 1
chr17:77498729|77498901 hsa-miR-658 1 0 0
chr17:77498729|77498901 hsa-miR-3154 1 0 0
chr17:77498729|77498901 hsa-miR-4304 1 0 0
chr17:77498729|77498901 hsa-miR-4253 1 0 0
chr17:77498729|77498901 hsa-miR-4271 1 0 0
chr17:77498729|77498901 hsa-miR-3936 1 1 0
chr17:77498729|77498901 hsa-miR-4651 1 1 0
chr17:77498729|77498901 hsa-miR-5194 1 0 0
chr17:77498729|77498901 hsa-miR-6072 0 1 0
chr17:77498729|77498901 hsa-miR-6085 1 0 0
chr17:77498729|77498901 hsa-miR-6090 1 0 0
chr17:77498729|77498901 hsa-miR-6127 1 0 0
chr17:77498729|77498901 hsa-miR-8073 1 1 0
chr17:77498729|77498901 hsa-miR-12119 1 0 0
chr17:77498729|77498901 hsa-miR-4433b-3p 1 0 0
chr17:77498729|77498901 hsa-miR-92a-2-5p 0 1 0
chr17:77498729|77498901 hsa-miR-6747-5p 1 0 0
chr17:77498729|77498901 hsa-miR-6825-5p 0 1 0
chr17:77498729|77498901 hsa-miR-6089 1 0 0
chr17:77498729|77498901 hsa-miR-6757-5p 1 0 0
chr17:77498729|77498901 hsa-miR-6845-3p 1 0 0
chr17:77498729|77498901 hsa-miR-6742-5p 1 0 0
chr17:77498729|77498901 hsa-miR-6748-5p 1 0 0
chr17:77498729|77498901 hsa-miR-4725-5p 1 0 0
chr17:77498729|77498901 hsa-miR-4697-3p 1 0 0
chr17:77498729|77498901 hsa-miR-6732-5p 1 0 0
chr17:77498729|77498901 hsa-miR-6782-5p 1 1 0
chr17:77498729|77498901 hsa-miR-6735-3p 0 1 0
chr17:77498729|77498901 hsa-miR-6786-5p 1 0 0
chr17:77498729|77498901 hsa-miR-6514-3p 0 1 0
chr17:77498729|77498901 hsa-miR-7113-3p 1 0 0
chr17:77498729|77498901 hsa-miR-4787-5p 1 0 0
chr17:77498729|77498901 hsa-miR-103a-3p 0 1 0
chr17:77498729|77498901 hsa-miR-7156-3p 0 1 0
chr17:77498729|77498901 hsa-miR-1236-3p 1 0 0
chr17:77498729|77498901 hsa-miR-3120-5p 0 1 0
chr17:77498729|77498901 hsa-miR-4695-3p 1 0 0
chr17:77498729|77498901 hsa-miR-6778-3p 0 1 0
chr17:77498729|77498901 hsa-miR-6868-5p 0 1 0
chr17:77498729|77498901 hsa-miR-6734-3p 0 1 0
chr17:77498729|77498901 hsa-miR-3179 0 1 0
chr17:77498729|77498901 hsa-miR-6780b-3p 0 1 0
chr17:77498729|77498901 hsa-miR-3680-5p 0 1 0
chr17:77498729|77498901 hsa-miR-6769b-5p 1 0 0
chr17:77498729|77498901 hsa-miR-1343-5p 1 0 0
chr17:77498729|77498901 hsa-miR-6737-5p 1 0 0
chr17:77498729|77498901 hsa-miR-6752-5p 1 0 0
chr17:77498729|77498901 hsa-miR-6756-5p 1 1 0
chr17:77498729|77498901 hsa-miR-6803-5p 1 0 0
chr17:77498729|77498901 hsa-miR-6819-5p 1 0 0
chr17:77498729|77498901 hsa-miR-7110-5p 1 0 0
chr17:77498729|77498901 hsa-miR-1249-5p 0 1 0
chr17:77498729|77498901 hsa-miR-6722-3p 1 0 0
chr17:77498729|77498901 hsa-miR-6751-5p 1 0 0
chr17:77498729|77498901 hsa-miR-6763-5p 1 0 0
chr17:77498729|77498901 hsa-miR-6779-5p 1 0 0
chr17:77498729|77498901 hsa-miR-6780a-5p 1 0 0
chr17:77498729|77498901 hsa-miR-7111-5p 1 0 0
chr17:77498729|77498901 hsa-miR-4728-5p 1 0 0
chr17:77498729|77498901 hsa-miR-6780b-5p 1 0 0
chr17:77498729|77498901 hsa-miR-1237-5p 1 0 0
chr17:77498729|77498901 hsa-miR-6795-5p 1 0 0
chr17:77498729|77498901 hsa-miR-6887-5p 1 0 0
chr17:77498729|77498901 hsa-miR-6889-5p 0 1 0
chr17:77498729|77498901 hsa-miR-3187-5p 1 0 0
chr17:77498729|77498901 hsa-miR-4723-5p 1 0 0
chr17:77498729|77498901 hsa-miR-939-5p 1 0 0
chr17:77498729|77498901 hsa-miR-4665-5p 1 0 0
chr17:77498729|77498901 hsa-miR-6784-3p 1 1 0
chr17:77498729|77498901 hsa-miR-6862-3p 1 1 0
chr17:77498729|77498901 hsa-miR-6810-3p 0 1 0
chr17:77498729|77498901 hsa-miR-3150b-5p 0 1 0
chr17:77498729|77498901 hsa-miR-4756-5p 0 1 0
chr17:77498729|77498901 hsa-miR-363-5p 1 0 0
chr17:77498729|77498901 hsa-miR-5006-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:77498729|77498901
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MIFSICHRSPPLRHAARKQGKGPPSE
Nucleotide Sequence ATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCCTCCGAGTGA
CircID chr17:77498729|77498901
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MLPGNKGRGLPPSESVMRPRPPRGCGEAALEPQAGVRAP
Nucleotide Sequence ATGCTGCCAGGAAACAAGGGAAGGGGCCTCCCTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCC
CircID chr17:77498729|77498901
ORF Type ORF3
Protein Length 41
Nucleotide Length 126
Protein Sequence MPVAPVQPPHNLGEAAASSLTHSEGGPFPCFLAACRRGGER
Nucleotide Sequence CTGCCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGGAGGCCCCTTCCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab