CircRNA Information

General Information
circRNA Basic Information
CircID chr17:7804968|7805338
Strand +
CircType exon
Host Gene ENSG00000183914.13;
Algorism CIRI2;
Sequence TGCCTGCATCACTATCTCCACTTGGGCTGGGGGCCGTCCATAAGACTTGATCTCTCCTATATCCTTCTTGTTCAGAGACTCCAGGGCCTGGGGGAAAAGGGGATAAAGTGAGGGTAAGACAGGACCTTCTGGAGACAGAACCTAGCTGAGGTGCCACCTCTTCTTCCCACTTCCCCAGAGTCTTTGAGGACAAAGAAGACTGGCCCATTCCCTTCCCCGGGGCCTCGCGTTCCTGGCTCCCATCCTTGCACCCGCCCCTGGTACCCGCATGGCCTCTTCCAGGGCGGGCAGTGCCTCTTCTAGATCTTTCTGGGCATTGTCAGCCAGTGCCTGACACTTGATTTCCTCAACTGCAATCTTTTCACTGTTGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:7804968|7805338 hsa-miR-184 0 0 1
chr17:7804968|7805338 hsa-miR-185-5p 0 0 1
chr17:7804968|7805338 hsa-miR-185-3p 0 0 1
chr17:7804968|7805338 hsa-miR-326 0 0 1
chr17:7804968|7805338 hsa-miR-493-5p 0 0 1
chr17:7804968|7805338 hsa-miR-493-3p 0 0 1
chr17:7804968|7805338 hsa-miR-593-5p 0 0 1
chr17:7804968|7805338 hsa-miR-593-3p 0 0 1
chr17:7804968|7805338 hsa-miR-620 0 0 1
chr17:7804968|7805338 hsa-miR-637 0 0 1
chr17:7804968|7805338 hsa-miR-1264 0 1 1
chr17:7804968|7805338 hsa-miR-766-5p 0 0 1
chr17:7804968|7805338 hsa-miR-766-3p 0 0 1
chr17:7804968|7805338 hsa-miR-892b 0 0 1
chr17:7804968|7805338 hsa-miR-873-5p 0 0 1
chr17:7804968|7805338 hsa-miR-873-3p 0 0 1
chr17:7804968|7805338 hsa-miR-920 0 0 1
chr17:7804968|7805338 hsa-miR-1291 0 0 1
chr17:7804968|7805338 hsa-miR-1270 0 0 1
chr17:7804968|7805338 hsa-miR-1224-5p 0 0 1
chr17:7804968|7805338 hsa-miR-1289 0 0 1
chr17:7804968|7805338 hsa-miR-361-3p 1 1 1
chr17:7804968|7805338 hsa-miR-330-5p 0 0 1
chr17:7804968|7805338 hsa-miR-7 0 0 1
chr17:7804968|7805338 hsa-miR-886-3p 0 0 1
chr17:7804968|7805338 hsa-miR-1245 0 0 1
chr17:7804968|7805338 hsa-miR-365 0 0 1
chr17:7804968|7805338 hsa-miR-608 1 0 0
chr17:7804968|7805338 hsa-miR-638 1 0 0
chr17:7804968|7805338 hsa-miR-663a 1 0 0
chr17:7804968|7805338 hsa-miR-762 1 0 0
chr17:7804968|7805338 hsa-miR-665 1 1 0
chr17:7804968|7805338 hsa-miR-760 0 1 0
chr17:7804968|7805338 hsa-miR-3138 1 0 0
chr17:7804968|7805338 hsa-miR-3141 1 0 0
chr17:7804968|7805338 hsa-miR-1193 1 0 0
chr17:7804968|7805338 hsa-miR-3185 1 1 0
chr17:7804968|7805338 hsa-miR-3196 1 0 0
chr17:7804968|7805338 hsa-miR-4308 0 1 0
chr17:7804968|7805338 hsa-miR-4269 0 1 0
chr17:7804968|7805338 hsa-miR-4271 0 1 0
chr17:7804968|7805338 hsa-miR-4281 1 1 0
chr17:7804968|7805338 hsa-miR-3621 1 0 0
chr17:7804968|7805338 hsa-miR-3665 1 0 0
chr17:7804968|7805338 hsa-miR-4449 1 0 0
chr17:7804968|7805338 hsa-miR-4476 0 1 0
chr17:7804968|7805338 hsa-miR-4488 1 0 0
chr17:7804968|7805338 hsa-miR-2392 1 1 0
chr17:7804968|7805338 hsa-miR-4651 1 0 0
chr17:7804968|7805338 hsa-miR-4688 1 0 0
chr17:7804968|7805338 hsa-miR-4689 1 0 0
chr17:7804968|7805338 hsa-miR-4739 1 0 0
chr17:7804968|7805338 hsa-miR-5192 1 0 0
chr17:7804968|7805338 hsa-miR-6075 1 0 0
chr17:7804968|7805338 hsa-miR-6077 0 1 0
chr17:7804968|7805338 hsa-miR-6085 1 0 0
chr17:7804968|7805338 hsa-miR-6090 1 0 0
chr17:7804968|7805338 hsa-miR-8089 1 1 0
chr17:7804968|7805338 hsa-miR-12115 1 1 0
chr17:7804968|7805338 hsa-miR-12120 1 1 0
chr17:7804968|7805338 hsa-miR-12128 1 0 0
chr17:7804968|7805338 hsa-miR-4433b-3p 1 0 0
chr17:7804968|7805338 hsa-miR-152-5p 0 1 0
chr17:7804968|7805338 hsa-miR-1247-3p 1 0 0
chr17:7804968|7805338 hsa-miR-4433a-3p 1 0 0
chr17:7804968|7805338 hsa-miR-6825-5p 1 1 0
chr17:7804968|7805338 hsa-miR-6894-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6728-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6089 1 0 0
chr17:7804968|7805338 hsa-miR-6757-5p 1 1 0
chr17:7804968|7805338 hsa-miR-6746-5p 1 0 0
chr17:7804968|7805338 hsa-miR-4709-3p 0 1 0
chr17:7804968|7805338 hsa-miR-505-5p 0 1 0
chr17:7804968|7805338 hsa-miR-6840-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6741-5p 1 1 0
chr17:7804968|7805338 hsa-miR-6776-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6787-3p 0 1 0
chr17:7804968|7805338 hsa-miR-6832-3p 0 1 0
chr17:7804968|7805338 hsa-miR-3605-5p 1 1 0
chr17:7804968|7805338 hsa-miR-6716-5p 0 1 0
chr17:7804968|7805338 hsa-miR-6871-5p 0 1 0
chr17:7804968|7805338 hsa-miR-3180-3p 1 0 0
chr17:7804968|7805338 hsa-miR-6772-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6793-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6827-5p 1 1 0
chr17:7804968|7805338 hsa-miR-6798-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6881-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6782-5p 1 0 0
chr17:7804968|7805338 hsa-miR-3156-5p 0 1 0
chr17:7804968|7805338 hsa-miR-5008-5p 1 1 0
chr17:7804968|7805338 hsa-miR-1226-5p 1 0 0
chr17:7804968|7805338 hsa-miR-4707-3p 0 1 0
chr17:7804968|7805338 hsa-miR-4640-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6753-5p 0 1 0
chr17:7804968|7805338 hsa-miR-1228-5p 1 1 0
chr17:7804968|7805338 hsa-miR-296-3p 1 0 0
chr17:7804968|7805338 hsa-miR-92b-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6516-5p 0 1 0
chr17:7804968|7805338 hsa-miR-3202 0 1 0
chr17:7804968|7805338 hsa-miR-4743-3p 0 1 0
chr17:7804968|7805338 hsa-miR-7111-3p 1 0 0
chr17:7804968|7805338 hsa-miR-149-3p 1 0 0
chr17:7804968|7805338 hsa-miR-937-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6824-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6789-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6513-3p 0 1 0
chr17:7804968|7805338 hsa-miR-7848-3p 0 1 0
chr17:7804968|7805338 hsa-miR-891a-3p 0 1 0
chr17:7804968|7805338 hsa-miR-551b-5p 0 1 0
chr17:7804968|7805338 hsa-miR-2277-5p 1 0 0
chr17:7804968|7805338 hsa-miR-5197-3p 0 1 0
chr17:7804968|7805338 hsa-miR-520g-5p 0 1 0
chr17:7804968|7805338 hsa-miR-5587-3p 0 1 0
chr17:7804968|7805338 hsa-miR-4699-5p 0 1 0
chr17:7804968|7805338 hsa-miR-589-3p 1 0 0
chr17:7804968|7805338 hsa-miR-517-5p 0 1 0
chr17:7804968|7805338 hsa-miR-10400-5p 1 0 0
chr17:7804968|7805338 hsa-miR-1207-5p 1 0 0
chr17:7804968|7805338 hsa-miR-1233-5p 1 0 0
chr17:7804968|7805338 hsa-miR-4763-3p 1 0 0
chr17:7804968|7805338 hsa-miR-6769b-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6778-5p 1 1 0
chr17:7804968|7805338 hsa-miR-6787-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6816-5p 1 1 0
chr17:7804968|7805338 hsa-miR-3180 1 0 0
chr17:7804968|7805338 hsa-miR-6726-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6737-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6743-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6756-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6769a-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6815-5p 0 1 0
chr17:7804968|7805338 hsa-miR-6819-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6851-5p 1 1 0
chr17:7804968|7805338 hsa-miR-7110-5p 1 0 0
chr17:7804968|7805338 hsa-miR-10401-5p 1 0 0
chr17:7804968|7805338 hsa-miR-1249-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6779-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6797-5p 1 0 0
chr17:7804968|7805338 hsa-miR-7111-5p 0 1 0
chr17:7804968|7805338 hsa-miR-4728-5p 1 0 0
chr17:7804968|7805338 hsa-miR-5196-5p 1 1 0
chr17:7804968|7805338 hsa-miR-6780b-5p 0 1 0
chr17:7804968|7805338 hsa-miR-6836-5p 1 0 0
chr17:7804968|7805338 hsa-miR-10396a-5p 1 0 0
chr17:7804968|7805338 hsa-miR-10396b-5p 1 0 0
chr17:7804968|7805338 hsa-miR-1237-5p 1 0 0
chr17:7804968|7805338 hsa-miR-1909-3p 1 0 0
chr17:7804968|7805338 hsa-miR-328-5p 1 0 0
chr17:7804968|7805338 hsa-miR-4649-5p 1 0 0
chr17:7804968|7805338 hsa-miR-4685-5p 1 0 0
chr17:7804968|7805338 hsa-miR-4725-3p 0 1 0
chr17:7804968|7805338 hsa-miR-4726-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6848-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6858-5p 1 0 0
chr17:7804968|7805338 hsa-miR-6883-5p 1 0 0
chr17:7804968|7805338 hsa-miR-3085-5p 1 0 0
chr17:7804968|7805338 hsa-miR-10396a-3p 1 0 0
chr17:7804968|7805338 hsa-miR-10396b-3p 1 0 0
chr17:7804968|7805338 hsa-miR-3198 0 1 0
chr17:7804968|7805338 hsa-miR-6731-5p 1 0 0
chr17:7804968|7805338 hsa-miR-4700-5p 0 1 0
chr17:7804968|7805338 hsa-miR-3173-3p 0 1 0
chr17:7804968|7805338 hsa-miR-3679-5p 0 1 0
chr17:7804968|7805338 hsa-miR-4646-5p 0 1 0
chr17:7804968|7805338 hsa-miR-4747-5p 0 1 0
chr17:7804968|7805338 hsa-miR-6766-5p 1 0 0
chr17:7804968|7805338 hsa-miR-4667-5p 0 1 0
chr17:7804968|7805338 hsa-miR-6791-5p 1 1 0
chr17:7804968|7805338 hsa-miR-518d-5p 0 1 0
chr17:7804968|7805338 hsa-miR-518f-5p 0 1 0
chr17:7804968|7805338 hsa-miR-520c-5p 0 1 0
chr17:7804968|7805338 hsa-miR-526a-5p 0 1 0
chr17:7804968|7805338 hsa-miR-6775-3p 1 0 0
chr17:7804968|7805338 hsa-miR-3085-3p 0 1 0
chr17:7804968|7805338 hsa-miR-4691-5p 1 1 0
chr17:7804968|7805338 hsa-miR-135a-2-3p 0 1 0
chr17:7804968|7805338 hsa-miR-5006-3p 0 1 0
chr17:7804968|7805338 hsa-miR-4690-3p 0 1 0
chr17:7804968|7805338 hsa-miR-6715b-5p 0 1 0
chr17:7804968|7805338 hsa-miR-5699-3p 0 1 0
chr17:7804968|7805338 hsa-miR-9902 0 1 0
chr17:7804968|7805338 hsa-miR-550a-3p 1 1 0
chr17:7804968|7805338 hsa-miR-7161-5p 1 0 0
chr17:7804968|7805338 hsa-miR-148b-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:7804968|7805338
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MHHYLHLGWGPSIRLDLSYILLVQRLQGLGEKGIK
Nucleotide Sequence CTGCATCACTATCTCCACTTGGGCTGGGGGCCGTCCATAAGACTTGATCTCTCCTATATCCTTCTTGTTCAGAGACTCCAGGGCCTGGGGGAAAAGGGGATAAAGTGA
CircID chr17:7804968|7805338
ORF Type ORF2
Protein Length 39
Nucleotide Length 120
Protein Sequence MRTKKTGPFPSPGPRVPGSHPCTRPWYPHGLFQGGQCLF
Nucleotide Sequence TTGAGGACAAAGAAGACTGGCCCATTCCCTTCCCCGGGGCCTCGCGTTCCTGGCTCCCATCCTTGCACCCGCCCCTGGTACCCGCATGGCCTCTTCCAGGGCGGGCAGTGCCTCTTCTAG
CircID chr17:7804968|7805338
ORF Type ORF3
Protein Length 44
Nucleotide Length 135
Protein Sequence MAHSLPRGLAFLAPILAPAPGTRMASSRAGSASSRSFWALSASA
Nucleotide Sequence CTGGCCCATTCCCTTCCCCGGGGCCTCGCGTTCCTGGCTCCCATCCTTGCACCCGCCCCTGGTACCCGCATGGCCTCTTCCAGGGCGGGCAGTGCCTCTTCTAGATCTTTCTGGGCATTGTCAGCCAGTGCCTGA
CircID chr17:7804968|7805338
ORF Type ORF4
Protein Length 31
Nucleotide Length 96
Protein Sequence MHPPLVPAWPLPGRAVPLLDLSGHCQPVPDT
Nucleotide Sequence TTGCACCCGCCCCTGGTACCCGCATGGCCTCTTCCAGGGCGGGCAGTGCCTCTTCTAGATCTTTCTGGGCATTGTCAGCCAGTGCCTGACACTTGA
CircID chr17:7804968|7805338
ORF Type ORF5
Protein Length 69
Nucleotide Length 207
Protein Sequence MGQSSLSSKTLGKWEEEVAPQLGSVSRRSCLTLTLSPFPPGPGVSEQEGYRRDQVLWTAPSPSGDSDAG
Nucleotide Sequence ATGGGCCAGTCTTCTTTGTCCTCAAAGACTCTGGGGAAGTGGGAAGAAGAGGTGGCACCTCAGCTAGGTTCTGTCTCCAGAAGGTCCTGTCTTACCCTCACTTTATCCCCTTTTCCCCCAGGCCCTGGAGTCTCTGAACAAGAAGGATATAGGAGAGATCAAGTCTTATGGACGGCCCCCAGCCCAAGTGGAGATAGTGATGCAGGC
CircID chr17:7804968|7805338
ORF Type ORF6
Protein Length 61
Nucleotide Length 186
Protein Sequence MADNAQKDLEEALPALEEAMRVPGAGARMGARNARPRGREWASLLCPQRLWGSGKKRWHLS
Nucleotide Sequence CTGGCTGACAATGCCCAGAAAGATCTAGAAGAGGCACTGCCCGCCCTGGAAGAGGCCATGCGGGTACCAGGGGCGGGTGCAAGGATGGGAGCCAGGAACGCGAGGCCCCGGGGAAGGGAATGGGCCAGTCTTCTTTGTCCTCAAAGACTCTGGGGAAGTGGGAAGAAGAGGTGGCACCTCAGCTAG
CircID chr17:7804968|7805338
ORF Type ORF7
Protein Length 46
Nucleotide Length 138
Protein Sequence MSPEGPVLPSLYPLFPQALESLNKKDIGEIKSYGRPPAQVEIVMQA
Nucleotide Sequence CTGTCTCCAGAAGGTCCTGTCTTACCCTCACTTTATCCCCTTTTCCCCCAGGCCCTGGAGTCTCTGAACAAGAAGGATATAGGAGAGATCAAGTCTTATGGACGGCCCCCAGCCCAAGTGGAGATAGTGATGCAGGCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab