CircRNA Information

General Information
circRNA Basic Information
CircID chr17:78121556|78122631
Strand -
CircType exon
Host Gene ENSG00000141524.14;
Algorism CIRI2;
Sequence CTGGATCATGAACTCCGAGAAGACGTGGACGGCCACGGCGCAGCCCAGCGCGGTCCCCAGACACAGCAGCCACACAAGCCCCAGCACAGCCGCCTGCCGCAGCCTCCCGCACACGCTCCTGGGGCTGTGCCGCAGCTGCCACTCGGCCAGCAGCTCCTTCAGCCGGGTGCGAATATTGTCCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:78121556|78122631 hsa-miR-433-5p 0 0 1
chr17:78121556|78122631 hsa-miR-433-3p 0 0 1
chr17:78121556|78122631 hsa-miR-558 0 0 1
chr17:78121556|78122631 hsa-miR-581 0 0 1
chr17:78121556|78122631 hsa-miR-604 0 0 1
chr17:78121556|78122631 hsa-miR-637 1 0 1
chr17:78121556|78122631 hsa-miR-640 0 0 1
chr17:78121556|78122631 hsa-miR-647 0 0 1
chr17:78121556|78122631 hsa-miR-708-5p 0 0 1
chr17:78121556|78122631 hsa-miR-708-3p 0 0 1
chr17:78121556|78122631 hsa-miR-147b-5p 0 0 1
chr17:78121556|78122631 hsa-miR-147b-3p 0 0 1
chr17:78121556|78122631 hsa-miR-665 0 0 1
chr17:78121556|78122631 hsa-miR-942-5p 0 0 1
chr17:78121556|78122631 hsa-miR-942-3p 0 0 1
chr17:78121556|78122631 hsa-miR-1231 0 0 1
chr17:78121556|78122631 hsa-miR-1204 0 0 1
chr17:78121556|78122631 hsa-miR-1206 0 0 1
chr17:78121556|78122631 hsa-miR-1252-5p 0 0 1
chr17:78121556|78122631 hsa-miR-1252-3p 0 0 1
chr17:78121556|78122631 hsa-miR-885-3p 0 0 1
chr17:78121556|78122631 hsa-miR-485-5p 0 0 1
chr17:78121556|78122631 hsa-miR-941 0 0 1
chr17:78121556|78122631 hsa-miR-28-5p 0 0 1
chr17:78121556|78122631 hsa-miR-338-5p 0 0 1
chr17:78121556|78122631 hsa-miR-644 0 0 1
chr17:78121556|78122631 hsa-miR-147 0 0 1
chr17:78121556|78122631 hsa-miR-147a 1 0 0
chr17:78121556|78122631 hsa-miR-638 1 0 0
chr17:78121556|78122631 hsa-miR-658 1 0 0
chr17:78121556|78122631 hsa-miR-762 1 0 0
chr17:78121556|78122631 hsa-miR-1268a 1 0 0
chr17:78121556|78122631 hsa-miR-3196 1 0 0
chr17:78121556|78122631 hsa-miR-3665 1 0 0
chr17:78121556|78122631 hsa-miR-3937 1 0 0
chr17:78121556|78122631 hsa-miR-1268b 1 0 0
chr17:78121556|78122631 hsa-miR-3135b 1 0 0
chr17:78121556|78122631 hsa-miR-4466 1 0 0
chr17:78121556|78122631 hsa-miR-4467 1 0 0
chr17:78121556|78122631 hsa-miR-3689c 1 0 0
chr17:78121556|78122631 hsa-miR-4489 1 0 0
chr17:78121556|78122631 hsa-miR-4505 1 0 0
chr17:78121556|78122631 hsa-miR-4507 1 0 0
chr17:78121556|78122631 hsa-miR-4508 1 0 0
chr17:78121556|78122631 hsa-miR-1587 1 0 0
chr17:78121556|78122631 hsa-miR-3960 1 0 0
chr17:78121556|78122631 hsa-miR-4656 1 0 0
chr17:78121556|78122631 hsa-miR-4669 1 0 0
chr17:78121556|78122631 hsa-miR-4706 1 0 0
chr17:78121556|78122631 hsa-miR-4734 1 0 0
chr17:78121556|78122631 hsa-miR-4736 1 0 0
chr17:78121556|78122631 hsa-miR-4767 1 0 0
chr17:78121556|78122631 hsa-miR-5787 1 0 0
chr17:78121556|78122631 hsa-miR-6090 1 0 0
chr17:78121556|78122631 hsa-miR-6125 1 0 0
chr17:78121556|78122631 hsa-miR-8072 1 0 0
chr17:78121556|78122631 hsa-miR-8089 1 0 0
chr17:78121556|78122631 hsa-miR-11400 1 0 0
chr17:78121556|78122631 hsa-miR-4433b-3p 1 0 0
chr17:78121556|78122631 hsa-miR-4433a-3p 1 0 0
chr17:78121556|78122631 hsa-miR-210-3p 1 0 0
chr17:78121556|78122631 hsa-miR-4687-3p 1 0 0
chr17:78121556|78122631 hsa-miR-27a-5p 1 0 0
chr17:78121556|78122631 hsa-miR-6799-5p 1 0 0
chr17:78121556|78122631 hsa-miR-3192-5p 1 0 0
chr17:78121556|78122631 hsa-miR-6746-5p 1 0 0
chr17:78121556|78122631 hsa-miR-4722-5p 1 0 0
chr17:78121556|78122631 hsa-miR-3064-5p 1 0 0
chr17:78121556|78122631 hsa-miR-6820-5p 1 0 0
chr17:78121556|78122631 hsa-miR-6741-5p 1 0 0
chr17:78121556|78122631 hsa-miR-6762-3p 1 0 0
chr17:78121556|78122631 hsa-miR-4474-3p 1 0 0
chr17:78121556|78122631 hsa-miR-5589-5p 1 0 0
chr17:78121556|78122631 hsa-miR-7108-5p 1 0 0
chr17:78121556|78122631 hsa-miR-6829-5p 1 0 0
chr17:78121556|78122631 hsa-miR-1343-3p 1 0 0
chr17:78121556|78122631 hsa-miR-1228-5p 1 0 0
chr17:78121556|78122631 hsa-miR-6771-5p 1 0 0
chr17:78121556|78122631 hsa-miR-4690-5p 1 0 0
chr17:78121556|78122631 hsa-miR-149-3p 1 0 0
chr17:78121556|78122631 hsa-miR-574-5p 1 0 0
chr17:78121556|78122631 hsa-miR-1250-5p 1 0 0
chr17:78121556|78122631 hsa-miR-4750-5p 1 0 0
chr17:78121556|78122631 hsa-miR-6770-3p 1 0 0
chr17:78121556|78122631 hsa-miR-10400-5p 1 0 0
chr17:78121556|78122631 hsa-miR-1207-5p 1 0 0
chr17:78121556|78122631 hsa-miR-1233-5p 1 0 0
chr17:78121556|78122631 hsa-miR-1273h-5p 1 0 0
chr17:78121556|78122631 hsa-miR-3689b-3p 1 0 0
chr17:78121556|78122631 hsa-miR-4763-3p 1 0 0
chr17:78121556|78122631 hsa-miR-6778-5p 1 0 0
chr17:78121556|78122631 hsa-miR-6787-5p 1 0 0
chr17:78121556|78122631 hsa-miR-6752-5p 1 0 0
chr17:78121556|78122631 hsa-miR-6813-5p 1 0 0
chr17:78121556|78122631 hsa-miR-6851-5p 1 0 0
chr17:78121556|78122631 hsa-miR-10401-5p 1 0 0
chr17:78121556|78122631 hsa-miR-6779-5p 1 0 0
chr17:78121556|78122631 hsa-miR-7111-5p 1 0 0
chr17:78121556|78122631 hsa-miR-3620-5p 1 0 0
chr17:78121556|78122631 hsa-miR-4728-5p 1 0 0
chr17:78121556|78122631 hsa-miR-1909-3p 1 0 0
chr17:78121556|78122631 hsa-miR-328-5p 1 0 0
chr17:78121556|78122631 hsa-miR-3689a-3p 1 0 0
chr17:78121556|78122631 hsa-miR-449c-5p 1 0 0
chr17:78121556|78122631 hsa-miR-6846-5p 1 0 0
chr17:78121556|78122631 hsa-miR-6848-5p 1 0 0
chr17:78121556|78122631 hsa-miR-6883-5p 1 0 0
chr17:78121556|78122631 hsa-miR-6885-5p 1 0 0
chr17:78121556|78122631 hsa-miR-939-5p 1 0 0
chr17:78121556|78122631 hsa-miR-4758-5p 1 0 0
chr17:78121556|78122631 hsa-miR-3940-5p 1 0 0
chr17:78121556|78122631 hsa-miR-1271-3p 1 0 0
chr17:78121556|78122631 hsa-miR-6855-5p 1 0 0
chr17:78121556|78122631 hsa-miR-6785-5p 1 0 0
chr17:78121556|78122631 hsa-miR-6791-5p 1 0 0
chr17:78121556|78122631 hsa-miR-6884-5p 1 0 0
chr17:78121556|78122631 hsa-miR-3619-5p 1 0 0
chr17:78121556|78122631 hsa-miR-6504-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:78121556|78122631
ORF Type ORF1
Protein Length 61
Nucleotide Length 183
Protein Sequence LDHELREDVDGHGAAQRGPQTQQPHKPQHSRLPQPPAHAPGAVPQLPLGQQLLQPGANIVL
Nucleotide Sequence CTGGATCATGAACTCCGAGAAGACGTGGACGGCCACGGCGCAGCCCAGCGCGGTCCCCAGACACAGCAGCCACACAAGCCCCAGCACAGCCGCCTGCCGCAGCCTCCCGCACACGCTCCTGGGGCTGTGCCGCAGCTGCCACTCGGCCAGCAGCTCCTTCAGCCGGGTGCGAATATTGTCCTG

CircID chr17:78121556|78122631
ORF Type ORF2
Protein Length 58
Nucleotide Length 174
Protein Sequence MNSEKTWTATAQPSAVPRHSSHTSPSTAACRSLPHTLLGLCRSCHSASSSFSRVRILS
Nucleotide Sequence ATGAACTCCGAGAAGACGTGGACGGCCACGGCGCAGCCCAGCGCGGTCCCCAGACACAGCAGCCACACAAGCCCCAGCACAGCCGCCTGCCGCAGCCTCCCGCACACGCTCCTGGGGCTGTGCCGCAGCTGCCACTCGGCCAGCAGCTCCTTCAGCCGGGTGCGAATATTGTCC

CircID chr17:78121556|78122631
ORF Type ORF3
Protein Length 54
Nucleotide Length 162
Protein Sequence MKELLAEWQLRHSPRSVCGRLRQAAVLGLVWLLCLGTALGCAVAVHVFSEFMIQ
Nucleotide Sequence CTGAAGGAGCTGCTGGCCGAGTGGCAGCTGCGGCACAGCCCCAGGAGCGTGTGCGGGAGGCTGCGGCAGGCGGCTGTGCTGGGGCTTGTGTGGCTGCTGTGTCTGGGGACCGCGCTGGGCTGCGCCGTGGCCGTCCACGTCTTCTCGGAGTTCATGATCCAG

CircID chr17:78121556|78122631
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MCWGLCGCCVWGPRWAAPWPSTSSRSS
Nucleotide Sequence CTGTGCTGGGGCTTGTGTGGCTGCTGTGTCTGGGGACCGCGCTGGGCTGCGCCGTGGCCGTCCACGTCTTCTCGGAGTTCATGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites