CircRNA Information

General Information
circRNA Basic Information
CircID chr17:78124737|78124970
Strand +
CircType exon
Host Gene ENSG00000141524.14;
Algorism CIRI2;
Sequence CCCGAGGGGGAAGTGGAGGGGCCAGCCGGGCAGCGGCGGGGTCTGCTCCTGCTGTGGCCGGCTCAGATATGCCTGCGTGCTGGTATGGGCCCCTGGTCTGCCCTGGGGCTGGGGCGGCTGGGCAGGGCTGGGGTGGCCTCAGTGCCTCCTCCGGCCTCACCCTCAGGGCCTCTCTGCCTGTGCCCGCAGGCCTTGCACAGCCTGGGCCTGGCGCTGCTCTCCGCCCTGCAGGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:78124737|78124970 hsa-miR-19a-5p 0 0 1
chr17:78124737|78124970 hsa-miR-19a-3p 0 0 1
chr17:78124737|78124970 hsa-miR-214-5p 0 0 1
chr17:78124737|78124970 hsa-miR-214-3p 0 0 1
chr17:78124737|78124970 hsa-miR-503-5p 0 0 1
chr17:78124737|78124970 hsa-miR-503-3p 0 0 1
chr17:78124737|78124970 hsa-miR-634 0 0 1
chr17:78124737|78124970 hsa-miR-650 0 0 1
chr17:78124737|78124970 hsa-miR-765 0 0 1
chr17:78124737|78124970 hsa-miR-1205 0 0 1
chr17:78124737|78124970 hsa-miR-1291 0 0 1
chr17:78124737|78124970 hsa-miR-125a-5p 0 0 1
chr17:78124737|78124970 hsa-miR-125b 0 0 1
chr17:78124737|78124970 hsa-miR-19b 0 0 1
chr17:78124737|78124970 hsa-miR-637 1 0 0
chr17:78124737|78124970 hsa-miR-658 1 0 0
chr17:78124737|78124970 hsa-miR-1538 1 0 0
chr17:78124737|78124970 hsa-miR-3141 1 0 0
chr17:78124737|78124970 hsa-miR-3195 1 0 0
chr17:78124737|78124970 hsa-miR-3937 1 0 0
chr17:78124737|78124970 hsa-miR-3945 1 0 0
chr17:78124737|78124970 hsa-miR-4449 1 0 0
chr17:78124737|78124970 hsa-miR-4656 1 0 0
chr17:78124737|78124970 hsa-miR-4688 1 0 0
chr17:78124737|78124970 hsa-miR-4706 1 0 0
chr17:78124737|78124970 hsa-miR-4739 1 0 0
chr17:78124737|78124970 hsa-miR-5787 1 0 0
chr17:78124737|78124970 hsa-miR-6075 1 0 0
chr17:78124737|78124970 hsa-miR-6081 1 0 0
chr17:78124737|78124970 hsa-miR-6734-5p 1 0 0
chr17:78124737|78124970 hsa-miR-671-5p 1 0 0
chr17:78124737|78124970 hsa-miR-4687-3p 1 0 0
chr17:78124737|78124970 hsa-miR-6089 1 0 0
chr17:78124737|78124970 hsa-miR-6732-5p 1 0 0
chr17:78124737|78124970 hsa-miR-2467-3p 1 0 0
chr17:78124737|78124970 hsa-miR-7855-5p 1 0 0
chr17:78124737|78124970 hsa-miR-5008-5p 1 0 0
chr17:78124737|78124970 hsa-miR-6786-5p 1 0 0
chr17:78124737|78124970 hsa-miR-1226-5p 1 0 0
chr17:78124737|78124970 hsa-miR-6753-5p 1 0 0
chr17:78124737|78124970 hsa-miR-1908-5p 1 0 0
chr17:78124737|78124970 hsa-miR-296-3p 1 0 0
chr17:78124737|78124970 hsa-miR-6749-5p 1 0 0
chr17:78124737|78124970 hsa-miR-4743-5p 1 0 0
chr17:78124737|78124970 hsa-miR-4787-5p 1 0 0
chr17:78124737|78124970 hsa-miR-6789-5p 1 0 0
chr17:78124737|78124970 hsa-miR-6781-5p 1 0 0
chr17:78124737|78124970 hsa-miR-7112-5p 1 0 0
chr17:78124737|78124970 hsa-miR-1207-5p 1 0 0
chr17:78124737|78124970 hsa-miR-1233-5p 1 0 0
chr17:78124737|78124970 hsa-miR-4763-3p 1 0 0
chr17:78124737|78124970 hsa-miR-6787-5p 1 0 0
chr17:78124737|78124970 hsa-miR-6812-5p 1 0 0
chr17:78124737|78124970 hsa-miR-6816-5p 1 0 0
chr17:78124737|78124970 hsa-miR-1343-5p 1 0 0
chr17:78124737|78124970 hsa-miR-6743-5p 1 0 0
chr17:78124737|78124970 hsa-miR-6752-5p 1 0 0
chr17:78124737|78124970 hsa-miR-6756-5p 1 0 0
chr17:78124737|78124970 hsa-miR-6803-5p 1 0 0
chr17:78124737|78124970 hsa-miR-6842-5p 1 0 0
chr17:78124737|78124970 hsa-miR-6851-5p 1 0 0
chr17:78124737|78124970 hsa-miR-7110-5p 1 0 0
chr17:78124737|78124970 hsa-miR-6722-3p 1 0 0
chr17:78124737|78124970 hsa-miR-6751-5p 1 0 0
chr17:78124737|78124970 hsa-miR-6808-5p 1 0 0
chr17:78124737|78124970 hsa-miR-7111-5p 1 0 0
chr17:78124737|78124970 hsa-miR-5189-5p 1 0 0
chr17:78124737|78124970 hsa-miR-6836-5p 1 0 0
chr17:78124737|78124970 hsa-miR-4632-5p 1 0 0
chr17:78124737|78124970 hsa-miR-4649-5p 1 0 0
chr17:78124737|78124970 hsa-miR-4726-5p 1 0 0
chr17:78124737|78124970 hsa-miR-4749-5p 1 0 0
chr17:78124737|78124970 hsa-miR-6729-5p 1 0 0
chr17:78124737|78124970 hsa-miR-6831-5p 1 0 0
chr17:78124737|78124970 hsa-miR-939-5p 1 0 0
chr17:78124737|78124970 hsa-miR-10396a-3p 1 0 0
chr17:78124737|78124970 hsa-miR-6736-5p 1 0 0
chr17:78124737|78124970 hsa-miR-3619-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:78124737|78124970
ORF Type ORF1
Protein Length 64
Nucleotide Length 192
Protein Sequence MLLLWPAQICLRAGMGPWSALGLGRLGRAGVASVPPPASPSGPLCLCPQALHSLGLALLSALQA
Nucleotide Sequence CTGCTCCTGCTGTGGCCGGCTCAGATATGCCTGCGTGCTGGTATGGGCCCCTGGTCTGCCCTGGGGCTGGGGCGGCTGGGCAGGGCTGGGGTGGCCTCAGTGCCTCCTCCGGCCTCACCCTCAGGGCCTCTCTGCCTGTGCCCGCAGGCCTTGCACAGCCTGGGCCTGGCGCTGCTCTCCGCCCTGCAGGCC
CircID chr17:78124737|78124970
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence MVWAPGLPWGWGGWAGLGWPQCLLRPHPQGLSACARRPCTAWAWRCSPPCR
Nucleotide Sequence CTGGTATGGGCCCCTGGTCTGCCCTGGGGCTGGGGCGGCTGGGCAGGGCTGGGGTGGCCTCAGTGCCTCCTCCGGCCTCACCCTCAGGGCCTCTCTGCCTGTGCCCGCAGGCCTTGCACAGCCTGGGCCTGGCGCTGCTCTCCGCCCTGCAGG
CircID chr17:78124737|78124970
ORF Type ORF3
Protein Length 55
Nucleotide Length 165
Protein Sequence MPACWYGPLVCPGAGAAGQGWGGLSASSGLTLRASLPVPAGLAQPGPGAALRPAG
Nucleotide Sequence ATGCCTGCGTGCTGGTATGGGCCCCTGGTCTGCCCTGGGGCTGGGGCGGCTGGGCAGGGCTGGGGTGGCCTCAGTGCCTCCTCCGGCCTCACCCTCAGGGCCTCTCTGCCTGTGCCCGCAGGCCTTGCACAGCCTGGGCCTGGCGCTGCTCTCCGCCCTGCAGGC
CircID chr17:78124737|78124970
ORF Type ORF4
Protein Length 45
Nucleotide Length 138
Protein Sequence MCKACGHRQRGPEGEAGGGTEATPALPSRPSPRADQGPIPARRHI
Nucleotide Sequence CTGTGCAAGGCCTGCGGGCACAGGCAGAGAGGCCCTGAGGGTGAGGCCGGAGGAGGCACTGAGGCCACCCCAGCCCTGCCCAGCCGCCCCAGCCCCAGGGCAGACCAGGGGCCCATACCAGCACGCAGGCATATCTGA
CircID chr17:78124737|78124970
ORF Type ORF5
Protein Length 55
Nucleotide Length 165
Protein Sequence MRVRPEEALRPPQPCPAAPAPGQTRGPYQHAGISEPATAGADPAAARLAPPLPPR
Nucleotide Sequence CTGAGGGTGAGGCCGGAGGAGGCACTGAGGCCACCCCAGCCCTGCCCAGCCGCCCCAGCCCCAGGGCAGACCAGGGGCCCATACCAGCACGCAGGCATATCTGAGCCGGCCACAGCAGGAGCAGACCCCGCCGCTGCCCGGCTGGCCCCTCCACTTCCCCCTCGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab