CircRNA Information

General Information
circRNA Basic Information
CircID chr17:78171811|78172023
Strand -
CircType exon
Host Gene ENSG00000108639.6;
Algorism CIRI2;
Sequence CCCACTCCGGACCCCAACACTGCCTACGCCTCCTACCCAGGTGCATCTGTGGACAACTACCAACAGCCACCCTTCACCCAGAACGCGGAGACCACCGAGGGCTACCAGCCGCCCCCTGTGTACTGAGCGGCGGTTAGCGTGGGAAGGGGGACAGAGAGGGCCCTCCCCTCTGCCCTGGACTTTCCCATGAGCCTCCTGGAACTGCCAGCCCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:78171811|78172023 hsa-miR-34a-5p 0 0 1
chr17:78171811|78172023 hsa-miR-34a-3p 0 0 1
chr17:78171811|78172023 hsa-miR-449a 0 0 1
chr17:78171811|78172023 hsa-miR-662 0 0 1
chr17:78171811|78172023 hsa-miR-449b-5p 0 0 1
chr17:78171811|78172023 hsa-miR-449b-3p 0 0 1
chr17:78171811|78172023 hsa-miR-665 1 1 1
chr17:78171811|78172023 hsa-miR-940 0 0 1
chr17:78171811|78172023 hsa-miR-1203 0 0 1
chr17:78171811|78172023 hsa-miR-1262 0 0 1
chr17:78171811|78172023 hsa-miR-615-5p 0 1 1
chr17:78171811|78172023 hsa-miR-188-3p 0 0 1
chr17:78171811|78172023 hsa-miR-502-3p 1 1 1
chr17:78171811|78172023 hsa-miR-34c-5p 0 0 1
chr17:78171811|78172023 hsa-miR-501-3p 0 1 1
chr17:78171811|78172023 hsa-miR-1260 0 0 1
chr17:78171811|78172023 hsa-miR-323-5p 0 0 1
chr17:78171811|78172023 hsa-miR-220c 0 0 1
chr17:78171811|78172023 hsa-miR-1308 0 0 1
chr17:78171811|78172023 hsa-miR-129-3p 0 0 1
chr17:78171811|78172023 hsa-miR-601 1 0 0
chr17:78171811|78172023 hsa-miR-608 1 1 0
chr17:78171811|78172023 hsa-miR-637 1 0 0
chr17:78171811|78172023 hsa-miR-661 1 0 0
chr17:78171811|78172023 hsa-miR-658 1 0 0
chr17:78171811|78172023 hsa-miR-762 1 0 0
chr17:78171811|78172023 hsa-miR-1265 1 0 0
chr17:78171811|78172023 hsa-miR-2861 1 0 0
chr17:78171811|78172023 hsa-miR-3138 1 0 0
chr17:78171811|78172023 hsa-miR-3196 1 1 0
chr17:78171811|78172023 hsa-miR-3197 1 0 0
chr17:78171811|78172023 hsa-miR-4266 1 1 0
chr17:78171811|78172023 hsa-miR-3936 1 0 0
chr17:78171811|78172023 hsa-miR-4443 1 0 0
chr17:78171811|78172023 hsa-miR-4466 1 0 0
chr17:78171811|78172023 hsa-miR-3689c 1 0 0
chr17:78171811|78172023 hsa-miR-4483 1 0 0
chr17:78171811|78172023 hsa-miR-4486 1 0 0
chr17:78171811|78172023 hsa-miR-4488 1 0 0
chr17:78171811|78172023 hsa-miR-4498 0 1 0
chr17:78171811|78172023 hsa-miR-4507 1 0 0
chr17:78171811|78172023 hsa-miR-4533 1 0 0
chr17:78171811|78172023 hsa-miR-4651 1 0 0
chr17:78171811|78172023 hsa-miR-4656 1 0 0
chr17:78171811|78172023 hsa-miR-4692 1 0 0
chr17:78171811|78172023 hsa-miR-4710 1 0 0
chr17:78171811|78172023 hsa-miR-4739 1 0 0
chr17:78171811|78172023 hsa-miR-5192 1 0 0
chr17:78171811|78172023 hsa-miR-5572 1 1 0
chr17:78171811|78172023 hsa-miR-5683 0 1 0
chr17:78171811|78172023 hsa-miR-5698 1 0 0
chr17:78171811|78172023 hsa-miR-6085 0 1 0
chr17:78171811|78172023 hsa-miR-6133 1 0 0
chr17:78171811|78172023 hsa-miR-6745 1 0 0
chr17:78171811|78172023 hsa-miR-6860 1 0 0
chr17:78171811|78172023 hsa-miR-7974 1 0 0
chr17:78171811|78172023 hsa-miR-12114 1 0 0
chr17:78171811|78172023 hsa-miR-12127 1 0 0
chr17:78171811|78172023 hsa-miR-4433b-3p 1 0 0
chr17:78171811|78172023 hsa-miR-6734-5p 1 0 0
chr17:78171811|78172023 hsa-miR-323a-5p 1 1 0
chr17:78171811|78172023 hsa-miR-671-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6861-5p 1 1 0
chr17:78171811|78172023 hsa-miR-7106-5p 1 0 0
chr17:78171811|78172023 hsa-miR-4687-3p 1 1 0
chr17:78171811|78172023 hsa-miR-6892-3p 0 1 0
chr17:78171811|78172023 hsa-miR-3192-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6880-5p 1 0 0
chr17:78171811|78172023 hsa-miR-7847-3p 1 0 0
chr17:78171811|78172023 hsa-miR-4695-5p 1 1 0
chr17:78171811|78172023 hsa-miR-3064-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6730-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6741-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6806-5p 1 1 0
chr17:78171811|78172023 hsa-miR-197-5p 1 0 0
chr17:78171811|78172023 hsa-miR-8069 1 0 0
chr17:78171811|78172023 hsa-miR-6776-5p 1 1 0
chr17:78171811|78172023 hsa-miR-6873-3p 0 1 0
chr17:78171811|78172023 hsa-miR-6817-3p 0 1 0
chr17:78171811|78172023 hsa-miR-6768-5p 1 0 0
chr17:78171811|78172023 hsa-miR-3180-3p 1 1 0
chr17:78171811|78172023 hsa-miR-6748-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6772-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6793-5p 1 0 0
chr17:78171811|78172023 hsa-miR-185-3p 1 1 0
chr17:78171811|78172023 hsa-miR-4655-3p 1 0 0
chr17:78171811|78172023 hsa-miR-6732-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6805-5p 1 1 0
chr17:78171811|78172023 hsa-miR-6798-5p 0 1 0
chr17:78171811|78172023 hsa-miR-2467-3p 0 1 0
chr17:78171811|78172023 hsa-miR-6782-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6786-5p 1 0 0
chr17:78171811|78172023 hsa-miR-5088-5p 1 0 0
chr17:78171811|78172023 hsa-miR-1229-5p 1 1 0
chr17:78171811|78172023 hsa-miR-6753-5p 0 1 0
chr17:78171811|78172023 hsa-miR-30c-2-3p 1 0 0
chr17:78171811|78172023 hsa-miR-1228-5p 1 0 0
chr17:78171811|78172023 hsa-miR-4690-5p 1 0 0
chr17:78171811|78172023 hsa-miR-4717-3p 1 0 0
chr17:78171811|78172023 hsa-miR-7111-3p 0 1 0
chr17:78171811|78172023 hsa-miR-4787-5p 1 0 0
chr17:78171811|78172023 hsa-miR-4446-3p 1 1 0
chr17:78171811|78172023 hsa-miR-149-3p 1 0 0
chr17:78171811|78172023 hsa-miR-6717-5p 1 0 0
chr17:78171811|78172023 hsa-miR-202-3p 1 0 0
chr17:78171811|78172023 hsa-miR-3162-5p 1 0 0
chr17:78171811|78172023 hsa-miR-7160-3p 0 1 0
chr17:78171811|78172023 hsa-miR-1225-5p 1 0 0
chr17:78171811|78172023 hsa-miR-584-3p 0 1 0
chr17:78171811|78172023 hsa-miR-6720-3p 1 0 0
chr17:78171811|78172023 hsa-miR-598-5p 1 0 0
chr17:78171811|78172023 hsa-miR-328-3p 0 1 0
chr17:78171811|78172023 hsa-miR-6851-3p 0 1 0
chr17:78171811|78172023 hsa-miR-6734-3p 0 1 0
chr17:78171811|78172023 hsa-miR-6847-3p 0 1 0
chr17:78171811|78172023 hsa-miR-500a-3p 1 1 0
chr17:78171811|78172023 hsa-miR-10400-5p 1 0 0
chr17:78171811|78172023 hsa-miR-1233-5p 1 0 0
chr17:78171811|78172023 hsa-miR-1273h-5p 1 0 0
chr17:78171811|78172023 hsa-miR-3689b-3p 1 0 0
chr17:78171811|78172023 hsa-miR-4763-3p 1 0 0
chr17:78171811|78172023 hsa-miR-6769b-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6778-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6787-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6812-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6816-5p 0 1 0
chr17:78171811|78172023 hsa-miR-6893-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6775-5p 1 1 0
chr17:78171811|78172023 hsa-miR-1343-5p 1 0 0
chr17:78171811|78172023 hsa-miR-3180 1 0 0
chr17:78171811|78172023 hsa-miR-6737-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6752-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6756-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6813-5p 0 1 0
chr17:78171811|78172023 hsa-miR-6815-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6842-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6851-5p 1 0 0
chr17:78171811|78172023 hsa-miR-7110-5p 1 0 0
chr17:78171811|78172023 hsa-miR-10401-5p 1 0 0
chr17:78171811|78172023 hsa-miR-1249-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6722-3p 1 1 0
chr17:78171811|78172023 hsa-miR-6763-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6774-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6779-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6780a-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6788-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6808-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6879-5p 0 1 0
chr17:78171811|78172023 hsa-miR-7111-5p 1 0 0
chr17:78171811|78172023 hsa-miR-3127-3p 0 1 0
chr17:78171811|78172023 hsa-miR-320a-5p 0 1 0
chr17:78171811|78172023 hsa-miR-4685-3p 0 1 0
chr17:78171811|78172023 hsa-miR-4728-5p 1 0 0
chr17:78171811|78172023 hsa-miR-5196-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6780b-5p 1 0 0
chr17:78171811|78172023 hsa-miR-1237-5p 1 0 0
chr17:78171811|78172023 hsa-miR-328-5p 1 0 0
chr17:78171811|78172023 hsa-miR-3689a-3p 1 0 0
chr17:78171811|78172023 hsa-miR-449c-5p 0 1 0
chr17:78171811|78172023 hsa-miR-4632-5p 0 1 0
chr17:78171811|78172023 hsa-miR-4649-5p 1 1 0
chr17:78171811|78172023 hsa-miR-4685-5p 0 1 0
chr17:78171811|78172023 hsa-miR-4701-3p 1 1 0
chr17:78171811|78172023 hsa-miR-6729-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6735-5p 0 1 0
chr17:78171811|78172023 hsa-miR-6738-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6846-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6848-5p 1 1 0
chr17:78171811|78172023 hsa-miR-6883-5p 1 0 0
chr17:78171811|78172023 hsa-miR-3187-5p 1 0 0
chr17:78171811|78172023 hsa-miR-4436b-3p 0 1 0
chr17:78171811|78172023 hsa-miR-4697-5p 0 1 0
chr17:78171811|78172023 hsa-miR-6831-5p 1 0 0
chr17:78171811|78172023 hsa-miR-4758-5p 1 0 0
chr17:78171811|78172023 hsa-miR-34b-5p 0 1 0
chr17:78171811|78172023 hsa-miR-6511a-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6511b-5p 1 0 0
chr17:78171811|78172023 hsa-miR-3940-5p 1 0 0
chr17:78171811|78172023 hsa-miR-7843-5p 0 1 0
chr17:78171811|78172023 hsa-miR-1914-3p 1 0 0
chr17:78171811|78172023 hsa-miR-6736-5p 1 1 0
chr17:78171811|78172023 hsa-miR-6855-5p 0 1 0
chr17:78171811|78172023 hsa-miR-4747-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6766-5p 1 0 0
chr17:78171811|78172023 hsa-miR-1185-1-3p 0 1 0
chr17:78171811|78172023 hsa-miR-1185-2-3p 0 1 0
chr17:78171811|78172023 hsa-miR-9851-5p 0 1 0
chr17:78171811|78172023 hsa-miR-6756-3p 0 1 0
chr17:78171811|78172023 hsa-miR-6837-5p 0 1 0
chr17:78171811|78172023 hsa-miR-4723-3p 0 1 0
chr17:78171811|78172023 hsa-miR-6769b-3p 0 1 0
chr17:78171811|78172023 hsa-miR-363-5p 1 0 0
chr17:78171811|78172023 hsa-miR-6843-3p 1 1 0
chr17:78171811|78172023 hsa-miR-6733-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:78171811|78172023
ORF Type ORF1
Protein Length 56
Nucleotide Length 171
Protein Sequence MPTPPTQVHLWTTTNSHPSPRTRRPPRATSRPLCTERRLAWEGGQRGPSPLPWTFP
Nucleotide Sequence CTGCCTACGCCTCCTACCCAGGTGCATCTGTGGACAACTACCAACAGCCACCCTTCACCCAGAACGCGGAGACCACCGAGGGCTACCAGCCGCCCCCTGTGTACTGAGCGGCGGTTAGCGTGGGAAGGGGGACAGAGAGGGCCCTCCCCTCTGCCCTGGACTTTCCCATGA
CircID chr17:78171811|78172023
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MVALGGLRVLGEGWLLVVVHRCTWVGGVGSVGVRSG
Nucleotide Sequence CTGGTAGCCCTCGGTGGTCTCCGCGTTCTGGGTGAAGGGTGGCTGTTGGTAGTTGTCCACAGATGCACCTGGGTAGGAGGCGTAGGCAGTGTTGGGGTCCGGAGTGGG
CircID chr17:78171811|78172023
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MGKSRAEGRALSVPLPTLTAAQYTGGGW
Nucleotide Sequence ATGGGAAAGTCCAGGGCAGAGGGGAGGGCCCTCTCTGTCCCCCTTCCCACGCTAACCGCCGCTCAGTACACAGGGGGCGGCTGGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab