CircRNA Information

General Information
circRNA Basic Information
CircID chr17:78171903|78172042
Strand -
CircType exon
Host Gene ENSG00000108639.6;
Algorism CIRI2;
Sequence CACCGAGGGCTACCAGCCGCCCCCTGTGTACTGAGCGGCGGTTAGCGTGGGAAGGGGGACAGAGAGGGCCCTCCCCTCTGCCCTGGACTTTCCCATGAGCCTCCTGGAACTGCCAGCCCCTCTCTTTCACCTGTTCCATC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:78171903|78172042 hsa-miR-34a-5p 0 0 1
chr17:78171903|78172042 hsa-miR-34a-3p 0 0 1
chr17:78171903|78172042 hsa-miR-449a 0 0 1
chr17:78171903|78172042 hsa-miR-552-5p 0 0 1
chr17:78171903|78172042 hsa-miR-552-3p 0 0 1
chr17:78171903|78172042 hsa-miR-662 0 0 1
chr17:78171903|78172042 hsa-miR-449b-5p 0 0 1
chr17:78171903|78172042 hsa-miR-449b-3p 0 0 1
chr17:78171903|78172042 hsa-miR-665 1 1 1
chr17:78171903|78172042 hsa-miR-125a-3p 1 0 1
chr17:78171903|78172042 hsa-miR-423-5p 0 0 1
chr17:78171903|78172042 hsa-miR-188-3p 0 0 1
chr17:78171903|78172042 hsa-miR-34c-5p 0 0 1
chr17:78171903|78172042 hsa-miR-1260 0 0 1
chr17:78171903|78172042 hsa-miR-220c 0 0 1
chr17:78171903|78172042 hsa-miR-1308 0 0 1
chr17:78171903|78172042 hsa-miR-129-3p 0 0 1
chr17:78171903|78172042 hsa-miR-762 1 0 0
chr17:78171903|78172042 hsa-miR-2861 1 0 0
chr17:78171903|78172042 hsa-miR-3196 1 1 0
chr17:78171903|78172042 hsa-miR-4298 1 1 0
chr17:78171903|78172042 hsa-miR-3665 1 0 0
chr17:78171903|78172042 hsa-miR-4498 0 1 0
chr17:78171903|78172042 hsa-miR-4656 1 0 0
chr17:78171903|78172042 hsa-miR-4739 1 0 0
chr17:78171903|78172042 hsa-miR-5192 1 0 0
chr17:78171903|78172042 hsa-miR-6085 0 1 0
chr17:78171903|78172042 hsa-miR-6124 1 0 0
chr17:78171903|78172042 hsa-miR-6165 1 0 0
chr17:78171903|78172042 hsa-miR-12127 1 0 0
chr17:78171903|78172042 hsa-miR-6892-3p 0 1 0
chr17:78171903|78172042 hsa-miR-6510-5p 1 0 0
chr17:78171903|78172042 hsa-miR-6728-5p 1 0 0
chr17:78171903|78172042 hsa-miR-4695-5p 1 1 0
chr17:78171903|78172042 hsa-miR-6746-5p 1 0 0
chr17:78171903|78172042 hsa-miR-6730-5p 1 0 0
chr17:78171903|78172042 hsa-miR-6873-3p 0 1 0
chr17:78171903|78172042 hsa-miR-7845-5p 1 0 0
chr17:78171903|78172042 hsa-miR-6817-3p 0 1 0
chr17:78171903|78172042 hsa-miR-1292-5p 1 0 0
chr17:78171903|78172042 hsa-miR-185-3p 1 1 0
chr17:78171903|78172042 hsa-miR-6732-5p 1 0 0
chr17:78171903|78172042 hsa-miR-6805-5p 1 1 0
chr17:78171903|78172042 hsa-miR-6798-5p 1 1 0
chr17:78171903|78172042 hsa-miR-2467-3p 0 1 0
chr17:78171903|78172042 hsa-miR-6782-5p 1 0 0
chr17:78171903|78172042 hsa-miR-5088-5p 1 0 0
chr17:78171903|78172042 hsa-miR-4640-5p 1 0 0
chr17:78171903|78172042 hsa-miR-6753-5p 0 1 0
chr17:78171903|78172042 hsa-miR-296-3p 1 0 0
chr17:78171903|78172042 hsa-miR-4690-5p 1 0 0
chr17:78171903|78172042 hsa-miR-4717-3p 1 0 0
chr17:78171903|78172042 hsa-miR-7111-3p 0 1 0
chr17:78171903|78172042 hsa-miR-4787-5p 1 0 0
chr17:78171903|78172042 hsa-miR-4446-3p 1 1 0
chr17:78171903|78172042 hsa-miR-6800-5p 1 1 0
chr17:78171903|78172042 hsa-miR-7160-3p 0 1 0
chr17:78171903|78172042 hsa-miR-584-3p 0 1 0
chr17:78171903|78172042 hsa-miR-328-3p 0 1 0
chr17:78171903|78172042 hsa-miR-6851-3p 0 1 0
chr17:78171903|78172042 hsa-miR-6734-3p 0 1 0
chr17:78171903|78172042 hsa-miR-6847-3p 0 1 0
chr17:78171903|78172042 hsa-miR-4763-3p 1 0 0
chr17:78171903|78172042 hsa-miR-6816-5p 0 1 0
chr17:78171903|78172042 hsa-miR-6865-5p 1 0 0
chr17:78171903|78172042 hsa-miR-6775-5p 1 1 0
chr17:78171903|78172042 hsa-miR-6737-5p 1 0 0
chr17:78171903|78172042 hsa-miR-6743-5p 1 0 0
chr17:78171903|78172042 hsa-miR-6754-5p 1 0 0
chr17:78171903|78172042 hsa-miR-6756-5p 1 0 0
chr17:78171903|78172042 hsa-miR-6813-5p 1 1 0
chr17:78171903|78172042 hsa-miR-6842-5p 1 0 0
chr17:78171903|78172042 hsa-miR-6722-3p 1 1 0
chr17:78171903|78172042 hsa-miR-6779-5p 1 0 0
chr17:78171903|78172042 hsa-miR-6879-5p 0 1 0
chr17:78171903|78172042 hsa-miR-3127-3p 0 1 0
chr17:78171903|78172042 hsa-miR-320a-5p 0 1 0
chr17:78171903|78172042 hsa-miR-4685-3p 0 1 0
chr17:78171903|78172042 hsa-miR-5196-5p 1 0 0
chr17:78171903|78172042 hsa-miR-6780b-5p 1 0 0
chr17:78171903|78172042 hsa-miR-328-5p 1 0 0
chr17:78171903|78172042 hsa-miR-4632-5p 0 1 0
chr17:78171903|78172042 hsa-miR-4649-5p 0 1 0
chr17:78171903|78172042 hsa-miR-4685-5p 0 1 0
chr17:78171903|78172042 hsa-miR-4745-5p 1 0 0
chr17:78171903|78172042 hsa-miR-6735-5p 0 1 0
chr17:78171903|78172042 hsa-miR-6846-5p 1 0 0
chr17:78171903|78172042 hsa-miR-6848-5p 1 1 0
chr17:78171903|78172042 hsa-miR-4436b-3p 0 1 0
chr17:78171903|78172042 hsa-miR-939-5p 1 0 0
chr17:78171903|78172042 hsa-miR-6758-5p 0 1 0
chr17:78171903|78172042 hsa-miR-6856-5p 0 1 0
chr17:78171903|78172042 hsa-miR-7843-5p 0 1 0
chr17:78171903|78172042 hsa-miR-1914-3p 1 0 0
chr17:78171903|78172042 hsa-miR-6750-5p 1 0 0
chr17:78171903|78172042 hsa-miR-1185-1-3p 0 1 0
chr17:78171903|78172042 hsa-miR-1185-2-3p 0 1 0
chr17:78171903|78172042 hsa-miR-9851-5p 0 1 0
chr17:78171903|78172042 hsa-miR-6756-3p 0 1 0
chr17:78171903|78172042 hsa-miR-6837-5p 0 1 0
chr17:78171903|78172042 hsa-miR-4723-3p 0 1 0
chr17:78171903|78172042 hsa-miR-6769b-3p 0 1 0
chr17:78171903|78172042 hsa-miR-4756-5p 0 1 0
chr17:78171903|78172042 hsa-miR-6733-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:78171903|78172042
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence MEQVKERGWQFQEAHGKVQGRGEGPLCPPSHANRRSVHRGRLVALG
Nucleotide Sequence ATGGAACAGGTGAAAGAGAGGGGCTGGCAGTTCCAGGAGGCTCATGGGAAAGTCCAGGGCAGAGGGGAGGGCCCTCTCTGTCCCCCTTCCCACGCTAACCGCCGCTCAGTACACAGGGGGCGGCTGGTAGCCCTCGGT
CircID chr17:78171903|78172042
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MGKSRAEGRALSVPLPTLTAAQYTGGGW
Nucleotide Sequence ATGGGAAAGTCCAGGGCAGAGGGGAGGGCCCTCTCTGTCCCCCTTCCCACGCTAACCGCCGCTCAGTACACAGGGGGCGGCTGGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab