CircRNA Information

General Information
circRNA Basic Information
CircID chr17:78171957|78172108
Strand +
CircType exon
Host Gene ENSG00000108639.6;
Algorism CIRI2;
Sequence TTGGGGTGTGGCTCTGCCAGCCCCCGCCAGGCTATGAGGCTCCTTAGCTGTGTGTCAGCTGCACAGGATGGAACAGGTGAAAGAGAGGGGCTGGCAGTTCCAGGAGGCTCATGGGAAAGTCCAGGGCAGAGGGGAGGGCCCTCTCTGTCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:78171957|78172108 hsa-miR-422a 0 0 1
chr17:78171957|78172108 hsa-miR-596 0 0 1
chr17:78171957|78172108 hsa-miR-1301-5p 0 0 1
chr17:78171957|78172108 hsa-miR-1301-3p 0 0 1
chr17:78171957|78172108 hsa-miR-874-5p 0 0 1
chr17:78171957|78172108 hsa-miR-874-3p 0 0 1
chr17:78171957|78172108 hsa-miR-1202 0 0 1
chr17:78171957|78172108 hsa-miR-146b-3p 0 0 1
chr17:78171957|78172108 hsa-miR-324-3p 0 0 1
chr17:78171957|78172108 hsa-miR-378 0 0 1
chr17:78171957|78172108 hsa-miR-663 0 0 1
chr17:78171957|78172108 hsa-miR-663a 0 1 0
chr17:78171957|78172108 hsa-miR-762 0 1 0
chr17:78171957|78172108 hsa-miR-4308 0 1 0
chr17:78171957|78172108 hsa-miR-4290 0 1 0
chr17:78171957|78172108 hsa-miR-3941 0 1 0
chr17:78171957|78172108 hsa-miR-4498 1 1 0
chr17:78171957|78172108 hsa-miR-4521 0 1 0
chr17:78171957|78172108 hsa-miR-3972 1 1 0
chr17:78171957|78172108 hsa-miR-4730 0 1 0
chr17:78171957|78172108 hsa-miR-6892-3p 0 1 0
chr17:78171957|78172108 hsa-miR-7845-5p 0 1 0
chr17:78171957|78172108 hsa-miR-1915-5p 1 0 0
chr17:78171957|78172108 hsa-miR-185-3p 0 1 0
chr17:78171957|78172108 hsa-miR-6728-3p 0 1 0
chr17:78171957|78172108 hsa-miR-6858-3p 1 0 0
chr17:78171957|78172108 hsa-miR-4793-5p 0 1 0
chr17:78171957|78172108 hsa-miR-5004-3p 0 1 0
chr17:78171957|78172108 hsa-miR-7111-3p 0 1 0
chr17:78171957|78172108 hsa-miR-4787-5p 1 0 0
chr17:78171957|78172108 hsa-miR-1266-3p 0 1 0
chr17:78171957|78172108 hsa-miR-4446-3p 0 1 0
chr17:78171957|78172108 hsa-miR-6769a-3p 1 1 0
chr17:78171957|78172108 hsa-miR-5010-5p 0 1 0
chr17:78171957|78172108 hsa-miR-7160-3p 0 1 0
chr17:78171957|78172108 hsa-miR-3944-5p 0 1 0
chr17:78171957|78172108 hsa-miR-2114-3p 0 1 0
chr17:78171957|78172108 hsa-miR-6826-3p 1 1 0
chr17:78171957|78172108 hsa-miR-1914-5p 0 1 0
chr17:78171957|78172108 hsa-miR-6886-3p 0 1 0
chr17:78171957|78172108 hsa-miR-5088-3p 1 0 0
chr17:78171957|78172108 hsa-miR-130b-5p 1 1 0
chr17:78171957|78172108 hsa-miR-6787-5p 0 1 0
chr17:78171957|78172108 hsa-miR-3127-3p 1 0 0
chr17:78171957|78172108 hsa-miR-4685-3p 1 1 0
chr17:78171957|78172108 hsa-miR-10396b-5p 0 1 0
chr17:78171957|78172108 hsa-miR-6846-5p 0 1 0
chr17:78171957|78172108 hsa-miR-6848-5p 1 1 0
chr17:78171957|78172108 hsa-miR-6858-5p 1 0 0
chr17:78171957|78172108 hsa-miR-6791-3p 0 1 0
chr17:78171957|78172108 hsa-miR-4722-3p 0 1 0
chr17:78171957|78172108 hsa-miR-9851-5p 0 1 0
chr17:78171957|78172108 hsa-miR-5009-5p 0 1 0
chr17:78171957|78172108 hsa-miR-6775-3p 1 1 0
chr17:78171957|78172108 hsa-miR-4723-3p 0 1 0
chr17:78171957|78172108 hsa-miR-6769b-3p 0 1 0
chr17:78171957|78172108 hsa-miR-4756-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:78171957|78172108
ORF Type ORF1
Protein Length 50
Nucleotide Length 150
Protein Sequence LGCGSASPRQAMRLLSCVSAAQDGTGEREGLAVPGGSWESPGQRGGPSLS
Nucleotide Sequence TTGGGGTGTGGCTCTGCCAGCCCCCGCCAGGCTATGAGGCTCCTTAGCTGTGTGTCAGCTGCACAGGATGGAACAGGTGAAAGAGAGGGGCTGGCAGTTCCAGGAGGCTCATGGGAAAGTCCAGGGCAGAGGGGAGGGCCCTCTCTGTCC

CircID chr17:78171957|78172108
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MHRMEQVKERGWQFQEAHGKVQGRGEGPLCP
Nucleotide Sequence CTGCACAGGATGGAACAGGTGAAAGAGAGGGGCTGGCAGTTCCAGGAGGCTCATGGGAAAGTCCAGGGCAGAGGGGAGGGCCCTCTCTGTCCC

CircID chr17:78171957|78172108
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MDFPMSLLELPAPLFHLFHPVQLTHS
Nucleotide Sequence CTGGACTTTCCCATGAGCCTCCTGGAACTGCCAGCCCCTCTCTTTCACCTGTTCCATCCTGTGCAGCTGACACACAGCTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites