CircRNA Information

General Information
circRNA Basic Information
CircID chr17:78174489|78174649
Strand +
CircType exon
Host Gene ENSG00000167900.10;
Algorism CIRI2;
Sequence CACACCTTGGCCTTCTGGGAACTCTCCTTTGTGTGGCTGCCCCACCTGCCGCATGCTCCCTCCTCTCCTACCCACTGGTCTGCTTAAAGCTTCCCTCTCAGCTGCTGGGACGATCGCCCAGGCTGGAGCTGGCCCCGCTTGGTGGCCTGGGATCTGGCACA
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:78174489|78174649 hsa-miR-646 0 0 1
chr17:78174489|78174649 hsa-miR-661 0 0 1
chr17:78174489|78174649 hsa-miR-766-5p 0 0 1
chr17:78174489|78174649 hsa-miR-766-3p 0 0 1
chr17:78174489|78174649 hsa-miR-744-5p 0 0 1
chr17:78174489|78174649 hsa-miR-744-3p 0 0 1
chr17:78174489|78174649 hsa-miR-1227-5p 0 0 1
chr17:78174489|78174649 hsa-miR-1227-3p 0 0 1
chr17:78174489|78174649 hsa-miR-486-3p 0 1 1
chr17:78174489|78174649 hsa-miR-663a 1 0 0
chr17:78174489|78174649 hsa-miR-665 0 1 0
chr17:78174489|78174649 hsa-miR-920 1 0 0
chr17:78174489|78174649 hsa-miR-3132 1 0 0
chr17:78174489|78174649 hsa-miR-3147 1 0 0
chr17:78174489|78174649 hsa-miR-3188 1 1 0
chr17:78174489|78174649 hsa-miR-4298 1 0 0
chr17:78174489|78174649 hsa-miR-3665 1 1 0
chr17:78174489|78174649 hsa-miR-4449 1 0 0
chr17:78174489|78174649 hsa-miR-4510 0 1 0
chr17:78174489|78174649 hsa-miR-4651 1 0 0
chr17:78174489|78174649 hsa-miR-4656 1 0 0
chr17:78174489|78174649 hsa-miR-4688 1 0 0
chr17:78174489|78174649 hsa-miR-4689 1 0 0
chr17:78174489|78174649 hsa-miR-4706 1 0 0
chr17:78174489|78174649 hsa-miR-4739 1 0 0
chr17:78174489|78174649 hsa-miR-4754 1 0 0
chr17:78174489|78174649 hsa-miR-5192 1 1 0
chr17:78174489|78174649 hsa-miR-6075 1 0 0
chr17:78174489|78174649 hsa-miR-6079 0 1 0
chr17:78174489|78174649 hsa-miR-6081 1 0 0
chr17:78174489|78174649 hsa-miR-6085 1 0 0
chr17:78174489|78174649 hsa-miR-6090 1 0 0
chr17:78174489|78174649 hsa-miR-6127 1 1 0
chr17:78174489|78174649 hsa-miR-6133 1 0 0
chr17:78174489|78174649 hsa-miR-8072 1 0 0
chr17:78174489|78174649 hsa-miR-12115 1 0 0
chr17:78174489|78174649 hsa-miR-12119 1 0 0
chr17:78174489|78174649 hsa-miR-4433b-3p 1 0 0
chr17:78174489|78174649 hsa-miR-6734-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6765-5p 1 0 0
chr17:78174489|78174649 hsa-miR-671-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6861-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6825-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6894-5p 1 0 0
chr17:78174489|78174649 hsa-miR-1972 1 1 0
chr17:78174489|78174649 hsa-miR-6720-5p 0 1 0
chr17:78174489|78174649 hsa-miR-6880-5p 1 0 0
chr17:78174489|78174649 hsa-miR-4695-5p 1 0 0
chr17:78174489|78174649 hsa-miR-593-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6820-5p 1 1 0
chr17:78174489|78174649 hsa-miR-197-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6849-3p 0 1 0
chr17:78174489|78174649 hsa-miR-3180-3p 1 0 0
chr17:78174489|78174649 hsa-miR-6748-5p 1 1 0
chr17:78174489|78174649 hsa-miR-6793-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6805-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6782-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6786-5p 1 0 0
chr17:78174489|78174649 hsa-miR-1229-5p 1 1 0
chr17:78174489|78174649 hsa-miR-4640-5p 1 0 0
chr17:78174489|78174649 hsa-miR-4691-3p 0 1 0
chr17:78174489|78174649 hsa-miR-1228-5p 1 0 0
chr17:78174489|78174649 hsa-miR-4690-5p 1 0 0
chr17:78174489|78174649 hsa-miR-4732-5p 1 0 0
chr17:78174489|78174649 hsa-miR-149-3p 1 0 0
chr17:78174489|78174649 hsa-miR-6824-5p 1 0 0
chr17:78174489|78174649 hsa-miR-7846-3p 1 0 0
chr17:78174489|78174649 hsa-miR-6811-3p 1 0 0
chr17:78174489|78174649 hsa-miR-214-3p 1 0 0
chr17:78174489|78174649 hsa-miR-6792-5p 0 1 0
chr17:78174489|78174649 hsa-miR-1207-5p 1 0 0
chr17:78174489|78174649 hsa-miR-1233-5p 1 0 0
chr17:78174489|78174649 hsa-miR-4763-3p 1 0 0
chr17:78174489|78174649 hsa-miR-6769b-5p 1 1 0
chr17:78174489|78174649 hsa-miR-6778-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6775-5p 1 0 0
chr17:78174489|78174649 hsa-miR-1343-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6726-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6754-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6756-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6769a-5p 1 1 0
chr17:78174489|78174649 hsa-miR-6851-5p 1 0 0
chr17:78174489|78174649 hsa-miR-10401-5p 1 0 0
chr17:78174489|78174649 hsa-miR-1249-5p 1 1 0
chr17:78174489|78174649 hsa-miR-6763-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6780a-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6797-5p 1 0 0
chr17:78174489|78174649 hsa-miR-4728-5p 1 1 0
chr17:78174489|78174649 hsa-miR-5196-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6780b-5p 1 0 0
chr17:78174489|78174649 hsa-miR-328-5p 1 0 0
chr17:78174489|78174649 hsa-miR-4632-5p 1 0 0
chr17:78174489|78174649 hsa-miR-4726-5p 1 1 0
chr17:78174489|78174649 hsa-miR-4745-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6729-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6738-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6777-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6858-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6883-5p 1 0 0
chr17:78174489|78174649 hsa-miR-4723-5p 0 1 0
chr17:78174489|78174649 hsa-miR-939-5p 1 0 0
chr17:78174489|78174649 hsa-miR-4758-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6511a-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6731-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6856-5p 1 0 0
chr17:78174489|78174649 hsa-miR-1914-3p 1 0 0
chr17:78174489|78174649 hsa-miR-6750-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6849-5p 1 0 0
chr17:78174489|78174649 hsa-miR-6762-5p 0 1 0
chr17:78174489|78174649 hsa-miR-3619-5p 1 0 0
chr17:78174489|78174649 hsa-miR-377-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:78174489|78174649
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MAFWELSFVWLPHLPHAPSSPTHWSA
Nucleotide Sequence TTGGCCTTCTGGGAACTCTCCTTTGTGTGGCTGCCCCACCTGCCGCATGCTCCCTCCTCTCCTACCCACTGGTCTGCTTAA
CircID chr17:78174489|78174649
ORF Type ORF2
Protein Length 44
Nucleotide Length 132
Protein Sequence MCGCPTCRMLPPLLPTGLLKASLSAAGTIAQAGAGPAWWPGIWH
Nucleotide Sequence TTGTGTGGCTGCCCCACCTGCCGCATGCTCCCTCCTCTCCTACCCACTGGTCTGCTTAAAGCTTCCCTCTCAGCTGCTGGGACGATCGCCCAGGCTGGAGCTGGCCCCGCTTGGTGGCCTGGGATCTGGCAC
CircID chr17:78174489|78174649
ORF Type ORF3
Protein Length 49
Nucleotide Length 147
Protein Sequence MGTLLCVAAPPAACSLLSYPLVCLKLPSQLLGRSPRLELAPLGGLGSGT
Nucleotide Sequence CTGGGAACTCTCCTTTGTGTGGCTGCCCCACCTGCCGCATGCTCCCTCCTCTCCTACCCACTGGTCTGCTTAAAGCTTCCCTCTCAGCTGCTGGGACGATCGCCCAGGCTGGAGCTGGCCCCGCTTGGTGGCCTGGGATCTGGCACA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab