CircNet

General Information

circRNA Basic Information

CircID	chr17:78818667\|78821061
Strand	-
CircType	exon
Host Gene	ENSG00000055483.19;
Algorism	find_circ;CIRI2;DCC;
Sequence	TGAAGTGCTCCGTGTGCAAGAGCGTCTCGGACACCTACGACCCCTACTTGGACGTCGCGCTGGAGATCCGGCAAGCTGCGAATATTGTGCGTGCTCTGGAACTTTTTGTGAAAGCAGATGTCCTGAGTGGAGAGAATGCCTACATGTGTGCTAAATGCAAGAAGAAGGTTCCAGCCAGCAAGCGCTTCACCATCCACAGAACATCCAACGTCTTAACCCTTTCCCTCAAGCGCTTTGCCAACTTCAGCGGGGGGAAGATCACCAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:78818667\|78821061
ORF Type	ORF1
Protein Length	41
Nucleotide Length	123
Protein Sequence	MCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITK
Nucleotide Sequence	ATGTGTGCTAAATGCAAGAAGAAGGTTCCAGCCAGCAAGCGCTTCACCATCCACAGAACATCCAACGTCTTAACCCTTTCCCTCAAGCGCTTTGCCAACTTCAGCGGGGGGAAGATCACCAAG

CircID	chr17:78818667\|78821061
ORF Type	ORF2
Protein Length	37
Nucleotide Length	111
Protein Sequence	MQEEGSSQQALHHPQNIQRLNPFPQALCQLQRGEDHQ
Nucleotide Sequence	ATGCAAGAAGAAGGTTCCAGCCAGCAAGCGCTTCACCATCCACAGAACATCCAACGTCTTAACCCTTTCCCTCAAGCGCTTTGCCAACTTCAGCGGGGGGAAGATCACCAA

CircID	chr17:78818667\|78821061
ORF Type	ORF3
Protein Length	65
Nucleotide Length	195
Protein Sequence	VDGEALAGWNLLLAFSTHVGILSTQDICFHKKFQSTHNIRSLPDLQRDVQVGVVGVRDALAHGAL
Nucleotide Sequence	GTGGATGGTGAAGCGCTTGCTGGCTGGAACCTTCTTCTTGCATTTAGCACACATGTAGGCATTCTCTCCACTCAGGACATCTGCTTTCACAAAAAGTTCCAGAGCACGCACAATATTCGCAGCTTGCCGGATCTCCAGCGCGACGTCCAAGTAGGGGTCGTAGGTGTCCGAGACGCTCTTGCACACGGAGCACTT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr17:78818667\|78821061	U2AF2	10	2	0
chr17:78818667\|78821061	MOV10	1	1	0
chr17:78818667\|78821061	FUS	1	2	0
chr17:78818667\|78821061	NUMA1	1	0	0
chr17:78818667\|78821061	SF3B4	4	0	0
chr17:78818667\|78821061	FAM120A	1	0	0
chr17:78818667\|78821061	PRPF8	4	2	2
chr17:78818667\|78821061	UPF1	1	0	0
chr17:78818667\|78821061	SRSF10	0	2	0
chr17:78818667\|78821061	FMR1	1	0	1
chr17:78818667\|78821061	TROVE2	1	1	0
chr17:78818667\|78821061	AGO2	1	2	0
chr17:78818667\|78821061	ELAVL1	0	2	0
chr17:78818667\|78821061	DGCR8	1	0	0
chr17:78818667\|78821061	SRSF7	0	1	1
chr17:78818667\|78821061	SRSF1	0	1	4
chr17:78818667\|78821061	NOP58	1	0	4
chr17:78818667\|78821061	DHX9	1	0	0
chr17:78818667\|78821061	U2AF1	1	0	1
chr17:78818667\|78821061	NOP56	0	0	1
chr17:78818667\|78821061	SRSF9	0	0	1
chr17:78818667\|78821061	HNRNPU	1	0	0
chr17:78818667\|78821061	DDX54	2	0	5
chr17:78818667\|78821061	RBM10	8	0	0
chr17:78818667\|78821061	HNRNPA2B1	9	0	1
chr17:78818667\|78821061	SF3A3	5	0	0
chr17:78818667\|78821061	RBM22	2	2	0
chr17:78818667\|78821061	HNRNPC	0	9	0
chr17:78818667\|78821061	TRA2A	1	1	4
chr17:78818667\|78821061	ZNF184	0	0	1
chr17:78818667\|78821061	HNRNPA1	3	0	0
chr17:78818667\|78821061	DDX3X	0	0	1
chr17:78818667\|78821061	SMNDC1	5	0	1
chr17:78818667\|78821061	ACIN1	2	0	6
chr17:78818667\|78821061	LIN28B	2	0	2
chr17:78818667\|78821061	FXR1	0	1	0
chr17:78818667\|78821061	BCCIP	1	0	0
chr17:78818667\|78821061	IGF2BP1	0	1	0
chr17:78818667\|78821061	GTF2F1	1	0	0
chr17:78818667\|78821061	IGF2BP3	1	0	2
chr17:78818667\|78821061	IGF2BP2	2	1	7
chr17:78818667\|78821061	TARDBP	0	2	0
chr17:78818667\|78821061	YTHDC1	0	1	0
chr17:78818667\|78821061	BUD13	1	1	3
chr17:78818667\|78821061	RBFOX2	2	0	0
chr17:78818667\|78821061	CNBP	1	0	0
chr17:78818667\|78821061	DDX42	1	0	0
chr17:78818667\|78821061	CSTF2T	2	0	0
chr17:78818667\|78821061	VIM	1	0	0
chr17:78818667\|78821061	NONO	1	0	0
chr17:78818667\|78821061	RNF219	1	0	0
chr17:78818667\|78821061	XRN2	1	0	0
chr17:78818667\|78821061	AIFM1	0	1	1
chr17:78818667\|78821061	SRSF3	0	1	0
chr17:78818667\|78821061	EIF4A3	7	2	5
chr17:78818667\|78821061	FBL	2	1	3

CircRNA Information