CircRNA Information

General Information
circRNA Basic Information
CircID chr17:78971380|78971540
Strand +
CircType exon
Host Gene ENSG00000108679.11;
Algorism CIRI2;
Sequence CCCAGGACGCCCTCACTGCAGGCTCCCCTCCTCGGCTTCCTTCCTCTCTGCAATGACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACTGGAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:78971380|78971540 hsa-miR-146a-5p 0 0 1
chr17:78971380|78971540 hsa-miR-146a-3p 0 0 1
chr17:78971380|78971540 hsa-miR-493-5p 0 0 1
chr17:78971380|78971540 hsa-miR-493-3p 0 0 1
chr17:78971380|78971540 hsa-miR-526b-5p 0 0 1
chr17:78971380|78971540 hsa-miR-526b-3p 0 0 1
chr17:78971380|78971540 hsa-miR-578 0 0 1
chr17:78971380|78971540 hsa-miR-596 1 0 1
chr17:78971380|78971540 hsa-miR-616-5p 0 0 1
chr17:78971380|78971540 hsa-miR-616-3p 0 0 1
chr17:78971380|78971540 hsa-miR-653-5p 0 0 1
chr17:78971380|78971540 hsa-miR-653-3p 0 0 1
chr17:78971380|78971540 hsa-miR-541-5p 0 0 1
chr17:78971380|78971540 hsa-miR-541-3p 0 0 1
chr17:78971380|78971540 hsa-miR-939-5p 0 0 1
chr17:78971380|78971540 hsa-miR-939-3p 0 0 1
chr17:78971380|78971540 hsa-miR-1252-5p 0 0 1
chr17:78971380|78971540 hsa-miR-1252-3p 0 0 1
chr17:78971380|78971540 hsa-miR-127-5p 1 0 1
chr17:78971380|78971540 hsa-miR-671-5p 1 0 1
chr17:78971380|78971540 hsa-miR-125a-3p 1 0 1
chr17:78971380|78971540 hsa-miR-145-5p 0 0 1
chr17:78971380|78971540 hsa-miR-770-5p 0 0 1
chr17:78971380|78971540 hsa-miR-654-5p 0 0 1
chr17:78971380|78971540 hsa-miR-339-3p 0 0 1
chr17:78971380|78971540 hsa-miR-146b-5p 0 0 1
chr17:78971380|78971540 hsa-miR-151-5p 0 0 1
chr17:78971380|78971540 hsa-miR-1273 0 0 1
chr17:78971380|78971540 hsa-miR-658 1 0 0
chr17:78971380|78971540 hsa-miR-1182 1 0 0
chr17:78971380|78971540 hsa-miR-2861 1 0 0
chr17:78971380|78971540 hsa-miR-3125 1 0 0
chr17:78971380|78971540 hsa-miR-3131 1 0 0
chr17:78971380|78971540 hsa-miR-3141 1 0 0
chr17:78971380|78971540 hsa-miR-3154 1 0 0
chr17:78971380|78971540 hsa-miR-3175 1 0 0
chr17:78971380|78971540 hsa-miR-3185 1 0 0
chr17:78971380|78971540 hsa-miR-4327 1 0 0
chr17:78971380|78971540 hsa-miR-4270 1 0 0
chr17:78971380|78971540 hsa-miR-4271 1 0 0
chr17:78971380|78971540 hsa-miR-3916 1 0 0
chr17:78971380|78971540 hsa-miR-4476 1 0 0
chr17:78971380|78971540 hsa-miR-4481 1 0 0
chr17:78971380|78971540 hsa-miR-4483 1 0 0
chr17:78971380|78971540 hsa-miR-4507 1 0 0
chr17:78971380|78971540 hsa-miR-4516 1 0 0
chr17:78971380|78971540 hsa-miR-4533 1 0 0
chr17:78971380|78971540 hsa-miR-3974 1 0 0
chr17:78971380|78971540 hsa-miR-4669 1 0 0
chr17:78971380|78971540 hsa-miR-4688 1 0 0
chr17:78971380|78971540 hsa-miR-4689 1 0 0
chr17:78971380|78971540 hsa-miR-4706 1 0 0
chr17:78971380|78971540 hsa-miR-4710 1 0 0
chr17:78971380|78971540 hsa-miR-4721 1 0 0
chr17:78971380|78971540 hsa-miR-4739 1 0 0
chr17:78971380|78971540 hsa-miR-5698 1 0 0
chr17:78971380|78971540 hsa-miR-5739 1 0 0
chr17:78971380|78971540 hsa-miR-6088 1 0 0
chr17:78971380|78971540 hsa-miR-6126 1 0 0
chr17:78971380|78971540 hsa-miR-6127 1 0 0
chr17:78971380|78971540 hsa-miR-6133 1 0 0
chr17:78971380|78971540 hsa-miR-8060 1 0 0
chr17:78971380|78971540 hsa-miR-12115 1 0 0
chr17:78971380|78971540 hsa-miR-12118 1 0 0
chr17:78971380|78971540 hsa-miR-12120 1 0 0
chr17:78971380|78971540 hsa-miR-134-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6734-5p 1 0 0
chr17:78971380|78971540 hsa-miR-4731-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6765-5p 1 0 0
chr17:78971380|78971540 hsa-miR-7106-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6825-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6894-5p 1 0 0
chr17:78971380|78971540 hsa-miR-4687-3p 1 0 0
chr17:78971380|78971540 hsa-miR-6510-5p 1 0 0
chr17:78971380|78971540 hsa-miR-8071 1 0 0
chr17:78971380|78971540 hsa-miR-7114-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6089 1 0 0
chr17:78971380|78971540 hsa-miR-4695-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6744-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6746-5p 1 0 0
chr17:78971380|78971540 hsa-miR-4709-3p 1 0 0
chr17:78971380|78971540 hsa-miR-3928-3p 1 0 0
chr17:78971380|78971540 hsa-miR-4474-3p 1 0 0
chr17:78971380|78971540 hsa-miR-7108-5p 1 0 0
chr17:78971380|78971540 hsa-miR-3605-5p 1 0 0
chr17:78971380|78971540 hsa-miR-3180-3p 1 0 0
chr17:78971380|78971540 hsa-miR-3190-3p 1 0 0
chr17:78971380|78971540 hsa-miR-6827-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6760-5p 1 0 0
chr17:78971380|78971540 hsa-miR-2467-3p 1 0 0
chr17:78971380|78971540 hsa-miR-5088-5p 1 0 0
chr17:78971380|78971540 hsa-miR-7109-5p 1 0 0
chr17:78971380|78971540 hsa-miR-185-5p 1 0 0
chr17:78971380|78971540 hsa-miR-4786-3p 1 0 0
chr17:78971380|78971540 hsa-miR-1229-5p 1 0 0
chr17:78971380|78971540 hsa-miR-92b-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6749-5p 1 0 0
chr17:78971380|78971540 hsa-miR-3202 1 0 0
chr17:78971380|78971540 hsa-miR-4743-5p 1 0 0
chr17:78971380|78971540 hsa-miR-149-3p 1 0 0
chr17:78971380|78971540 hsa-miR-193a-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6824-5p 1 0 0
chr17:78971380|78971540 hsa-miR-3158-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6869-5p 1 0 0
chr17:78971380|78971540 hsa-miR-423-5p 1 0 0
chr17:78971380|78971540 hsa-let-7e-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6832-5p 1 0 0
chr17:78971380|78971540 hsa-miR-222-3p 1 0 0
chr17:78971380|78971540 hsa-miR-1207-5p 1 0 0
chr17:78971380|78971540 hsa-miR-1233-5p 1 0 0
chr17:78971380|78971540 hsa-miR-1273h-5p 1 0 0
chr17:78971380|78971540 hsa-miR-4763-3p 1 0 0
chr17:78971380|78971540 hsa-miR-6769b-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6778-5p 1 0 0
chr17:78971380|78971540 hsa-miR-1343-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6726-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6743-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6754-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6756-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6769a-5p 1 0 0
chr17:78971380|78971540 hsa-miR-1249-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6779-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6797-5p 1 0 0
chr17:78971380|78971540 hsa-miR-4728-5p 1 0 0
chr17:78971380|78971540 hsa-miR-5196-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6780b-5p 1 0 0
chr17:78971380|78971540 hsa-miR-328-5p 1 0 0
chr17:78971380|78971540 hsa-miR-4632-5p 1 0 0
chr17:78971380|78971540 hsa-miR-4649-5p 1 0 0
chr17:78971380|78971540 hsa-miR-4725-3p 1 0 0
chr17:78971380|78971540 hsa-miR-4745-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6729-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6738-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6777-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6794-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6795-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6846-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6858-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6887-5p 1 0 0
chr17:78971380|78971540 hsa-miR-4723-5p 1 0 0
chr17:78971380|78971540 hsa-miR-4758-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6511b-5p 1 0 0
chr17:78971380|78971540 hsa-miR-3085-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6856-5p 1 0 0
chr17:78971380|78971540 hsa-miR-1914-3p 1 0 0
chr17:78971380|78971540 hsa-miR-3173-3p 1 0 0
chr17:78971380|78971540 hsa-miR-4747-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6876-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6891-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6859-5p 1 0 0
chr17:78971380|78971540 hsa-miR-6884-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:78971380|78971540
ORF Type ORF1
Protein Length 48
Nucleotide Length 144
Protein Sequence MQAPLLGFLPLCNDLQQPATRCRPTHLSAQLQEITGRLPLGSTRSSPT
Nucleotide Sequence CTGCAGGCTCCCCTCCTCGGCTTCCTTCCTCTCTGCAATGACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACTGGAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACC
CircID chr17:78971380|78971540
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MSPYSPERSASRNYWKASTRVHQEFSHH
Nucleotide Sequence ATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACTGGAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCAC
CircID chr17:78971380|78971540
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MKLSAQVSRATSGGRLLKVIAERKEAEEGSLQ
Nucleotide Sequence TTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCATTGCAGAGAGGAAGGAAGCCGAGGAGGGGAGCCTGCAGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab