CircRNA Information

General Information
circRNA Basic Information
CircID chr17:78972428|78972679
Strand +
CircType exon
Host Gene ENSG00000108679.11;
Algorism CIRI2;
Sequence ATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATCCTCCTCCCCCAGGACCCCTCGTTCCAGATGCCCCTGGACCTGTATGCCTATGCAGTGGCCACAGGGGACGCCCTGCTGGAGAAGCTCTGCCTACAGTTCCTGGCCTGGAACTTCGAGGCCTTGACGCAGGCCGAGGCCTGGCCCAGTGTCCCCACAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:78972428|78972679 hsa-miR-22-5p 0 0 1
chr17:78972428|78972679 hsa-miR-22-3p 0 0 1
chr17:78972428|78972679 hsa-miR-214-5p 0 0 1
chr17:78972428|78972679 hsa-miR-214-3p 0 0 1
chr17:78972428|78972679 hsa-miR-217-5p 0 0 1
chr17:78972428|78972679 hsa-miR-217-3p 0 0 1
chr17:78972428|78972679 hsa-miR-552-5p 0 0 1
chr17:78972428|78972679 hsa-miR-552-3p 0 0 1
chr17:78972428|78972679 hsa-miR-583 0 0 1
chr17:78972428|78972679 hsa-miR-588 0 0 1
chr17:78972428|78972679 hsa-miR-625-5p 0 0 1
chr17:78972428|78972679 hsa-miR-625-3p 0 0 1
chr17:78972428|78972679 hsa-miR-637 1 0 1
chr17:78972428|78972679 hsa-miR-661 0 0 1
chr17:78972428|78972679 hsa-miR-1301-5p 0 0 1
chr17:78972428|78972679 hsa-miR-1301-3p 0 0 1
chr17:78972428|78972679 hsa-miR-766-5p 0 0 1
chr17:78972428|78972679 hsa-miR-766-3p 0 0 1
chr17:78972428|78972679 hsa-miR-765 0 1 1
chr17:78972428|78972679 hsa-miR-873-5p 0 0 1
chr17:78972428|78972679 hsa-miR-873-3p 0 0 1
chr17:78972428|78972679 hsa-miR-940 1 0 1
chr17:78972428|78972679 hsa-miR-943 0 0 1
chr17:78972428|78972679 hsa-miR-1183 0 0 1
chr17:78972428|78972679 hsa-miR-1234-3p 0 0 1
chr17:78972428|78972679 hsa-miR-663b 0 1 1
chr17:78972428|78972679 hsa-miR-1299 0 0 1
chr17:78972428|78972679 hsa-miR-1275 1 1 1
chr17:78972428|78972679 hsa-miR-1234 0 0 1
chr17:78972428|78972679 hsa-miR-671-5p 0 0 1
chr17:78972428|78972679 hsa-miR-491-5p 0 0 1
chr17:78972428|78972679 hsa-miR-615-5p 1 0 1
chr17:78972428|78972679 hsa-miR-1184 0 1 1
chr17:78972428|78972679 hsa-miR-331-3p 0 0 1
chr17:78972428|78972679 hsa-miR-875-3p 0 0 1
chr17:78972428|78972679 hsa-miR-338-3p 0 0 1
chr17:78972428|78972679 hsa-miR-515-5p 0 0 1
chr17:78972428|78972679 hsa-miR-153 0 0 1
chr17:78972428|78972679 hsa-miR-1254 0 0 1
chr17:78972428|78972679 hsa-miR-129-3p 0 0 1
chr17:78972428|78972679 hsa-miR-601 1 0 0
chr17:78972428|78972679 hsa-miR-612 1 0 0
chr17:78972428|78972679 hsa-miR-638 1 0 0
chr17:78972428|78972679 hsa-miR-761 0 1 0
chr17:78972428|78972679 hsa-miR-1182 1 0 0
chr17:78972428|78972679 hsa-miR-2861 1 0 0
chr17:78972428|78972679 hsa-miR-1193 1 0 0
chr17:78972428|78972679 hsa-miR-3188 0 1 0
chr17:78972428|78972679 hsa-miR-3193 0 1 0
chr17:78972428|78972679 hsa-miR-4252 0 1 0
chr17:78972428|78972679 hsa-miR-4281 1 0 0
chr17:78972428|78972679 hsa-miR-4292 1 0 0
chr17:78972428|78972679 hsa-miR-4440 1 0 0
chr17:78972428|78972679 hsa-miR-4449 1 0 0
chr17:78972428|78972679 hsa-miR-4471 0 1 0
chr17:78972428|78972679 hsa-miR-4486 1 0 0
chr17:78972428|78972679 hsa-miR-2392 0 1 0
chr17:78972428|78972679 hsa-miR-4513 0 1 0
chr17:78972428|78972679 hsa-miR-4525 1 0 0
chr17:78972428|78972679 hsa-miR-4530 0 1 0
chr17:78972428|78972679 hsa-miR-4651 1 0 0
chr17:78972428|78972679 hsa-miR-4657 1 0 0
chr17:78972428|78972679 hsa-miR-4688 1 1 0
chr17:78972428|78972679 hsa-miR-4706 1 0 0
chr17:78972428|78972679 hsa-miR-4721 1 0 0
chr17:78972428|78972679 hsa-miR-4739 1 1 0
chr17:78972428|78972679 hsa-miR-5047 0 1 0
chr17:78972428|78972679 hsa-miR-5194 1 1 0
chr17:78972428|78972679 hsa-miR-5698 1 0 0
chr17:78972428|78972679 hsa-miR-6090 1 0 0
chr17:78972428|78972679 hsa-miR-6133 1 0 0
chr17:78972428|78972679 hsa-miR-8089 1 0 0
chr17:78972428|78972679 hsa-miR-134-3p 0 1 0
chr17:78972428|78972679 hsa-miR-6734-5p 1 0 0
chr17:78972428|78972679 hsa-miR-3194-3p 0 1 0
chr17:78972428|78972679 hsa-miR-7106-5p 1 1 0
chr17:78972428|78972679 hsa-miR-6825-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6894-5p 1 1 0
chr17:78972428|78972679 hsa-miR-6857-5p 1 1 0
chr17:78972428|78972679 hsa-miR-1972 0 1 0
chr17:78972428|78972679 hsa-miR-6089 1 0 0
chr17:78972428|78972679 hsa-miR-6880-5p 1 0 0
chr17:78972428|78972679 hsa-miR-7847-3p 1 0 0
chr17:78972428|78972679 hsa-miR-4695-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6806-5p 1 1 0
chr17:78972428|78972679 hsa-miR-6841-3p 0 1 0
chr17:78972428|78972679 hsa-miR-3605-5p 1 1 0
chr17:78972428|78972679 hsa-miR-3180-3p 1 0 0
chr17:78972428|78972679 hsa-miR-6796-5p 1 1 0
chr17:78972428|78972679 hsa-miR-23a-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6798-5p 1 0 0
chr17:78972428|78972679 hsa-miR-2467-3p 0 1 0
chr17:78972428|78972679 hsa-miR-6782-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6810-5p 0 1 0
chr17:78972428|78972679 hsa-miR-6882-3p 0 1 0
chr17:78972428|78972679 hsa-miR-1343-3p 1 0 0
chr17:78972428|78972679 hsa-miR-6852-5p 1 0 0
chr17:78972428|78972679 hsa-miR-7109-5p 1 0 0
chr17:78972428|78972679 hsa-miR-4640-5p 1 1 0
chr17:78972428|78972679 hsa-miR-6757-3p 0 1 0
chr17:78972428|78972679 hsa-miR-149-3p 1 0 0
chr17:78972428|78972679 hsa-miR-193a-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6824-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6789-5p 1 1 0
chr17:78972428|78972679 hsa-miR-146b-3p 0 1 0
chr17:78972428|78972679 hsa-miR-5010-5p 1 1 0
chr17:78972428|78972679 hsa-miR-3922-5p 0 1 0
chr17:78972428|78972679 hsa-miR-584-3p 1 1 0
chr17:78972428|78972679 hsa-miR-508-5p 0 1 0
chr17:78972428|78972679 hsa-miR-3173-5p 0 1 0
chr17:78972428|78972679 hsa-miR-6779-3p 0 1 0
chr17:78972428|78972679 hsa-miR-4650-5p 0 1 0
chr17:78972428|78972679 hsa-miR-1233-5p 1 0 0
chr17:78972428|78972679 hsa-miR-4763-3p 1 1 0
chr17:78972428|78972679 hsa-miR-6769b-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6778-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6787-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6816-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6870-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6775-5p 1 0 0
chr17:78972428|78972679 hsa-miR-1343-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6737-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6743-5p 1 1 0
chr17:78972428|78972679 hsa-miR-6756-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6803-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6819-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6851-5p 1 0 0
chr17:78972428|78972679 hsa-miR-11181-3p 1 1 0
chr17:78972428|78972679 hsa-miR-1249-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6751-5p 1 0 0
chr17:78972428|78972679 hsa-miR-7111-5p 1 1 0
chr17:78972428|78972679 hsa-miR-4728-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6780b-5p 1 0 0
chr17:78972428|78972679 hsa-miR-1237-5p 1 0 0
chr17:78972428|78972679 hsa-miR-328-5p 1 0 0
chr17:78972428|78972679 hsa-miR-4649-5p 1 0 0
chr17:78972428|78972679 hsa-miR-4685-5p 1 1 0
chr17:78972428|78972679 hsa-miR-6729-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6735-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6738-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6777-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6795-5p 1 1 0
chr17:78972428|78972679 hsa-miR-6858-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6883-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6887-5p 1 1 0
chr17:78972428|78972679 hsa-miR-6889-5p 1 0 0
chr17:78972428|78972679 hsa-miR-4723-5p 0 1 0
chr17:78972428|78972679 hsa-miR-6885-5p 1 0 0
chr17:78972428|78972679 hsa-miR-939-5p 1 0 0
chr17:78972428|78972679 hsa-miR-1910-3p 0 1 0
chr17:78972428|78972679 hsa-miR-6856-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6799-3p 0 1 0
chr17:78972428|78972679 hsa-miR-7843-5p 1 0 0
chr17:78972428|78972679 hsa-miR-1914-3p 1 1 0
chr17:78972428|78972679 hsa-miR-4665-5p 1 1 0
chr17:78972428|78972679 hsa-miR-4700-5p 1 0 0
chr17:78972428|78972679 hsa-miR-3679-5p 1 0 0
chr17:78972428|78972679 hsa-miR-4646-5p 1 0 0
chr17:78972428|78972679 hsa-miR-4747-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6891-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6785-5p 1 0 0
chr17:78972428|78972679 hsa-miR-4667-5p 1 0 0
chr17:78972428|78972679 hsa-miR-6791-5p 1 0 0
chr17:78972428|78972679 hsa-miR-3136-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:78972428|78972679
ORF Type ORF1
Protein Length 82
Nucleotide Length 246
Protein Sequence MSSVKCFHKLASAYGARQLQGYCASLFAILLPQDPSFQMPLDLYAYAVATGDALLEKLCLQFLAWNFEALTQAEAWPSVPTD
Nucleotide Sequence CTGTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATCCTCCTCCCCCAGGACCCCTCGTTCCAGATGCCCCTGGACCTGTATGCCTATGCAGTGGCCACAGGGGACGCCCTGCTGGAGAAGCTCTGCCTACAGTTCCTGGCCTGGAACTTCGAGGCCTTGACGCAGGCCGAGGCCTGGCCCAGTGTCCCCACAGAC

CircID chr17:78972428|78972679
ORF Type ORF2
Protein Length 58
Nucleotide Length 177
Protein Sequence MPMGPGSCRATAQASLPSSSPRTPRSRCPWTCMPMQWPQGTPCWRSSAYSSWPGTSRP
Nucleotide Sequence CTGCCTATGGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATCCTCCTCCCCCAGGACCCCTCGTTCCAGATGCCCCTGGACCTGTATGCCTATGCAGTGGCCACAGGGGACGCCCTGCTGGAGAAGCTCTGCCTACAGTTCCTGGCCTGGAACTTCGAGGCCTTGA

CircID chr17:78972428|78972679
ORF Type ORF3
Protein Length 60
Nucleotide Length 180
Protein Sequence MRKPLCHPPPPGPLVPDAPGPVCLCSGHRGRPAGEALPTVPGLELRGLDAGRGLAQCPHR
Nucleotide Sequence CTGCGCAAGCCTCTTTGCCATCCTCCTCCCCCAGGACCCCTCGTTCCAGATGCCCCTGGACCTGTATGCCTATGCAGTGGCCACAGGGGACGCCCTGCTGGAGAAGCTCTGCCTACAGTTCCTGGCCTGGAACTTCGAGGCCTTGACGCAGGCCGAGGCCTGGCCCAGTGTCCCCACAGA

CircID chr17:78972428|78972679
ORF Type ORF4
Protein Length 35
Nucleotide Length 108
Protein Sequence MERGVLGEEDGKEACAVALQLPGPIGRGQLVEALD
Nucleotide Sequence CTGGAACGAGGGGTCCTGGGGGAGGAGGATGGCAAAGAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCATAGGCAGAGGCCAGCTTGTGGAAGCACTTGACTGA

CircID chr17:78972428|78972679
ORF Type ORF5
Protein Length 32
Nucleotide Length 99
Protein Sequence MGQASACVKASKFQARNCRQSFSSRASPVATA
Nucleotide Sequence CTGGGCCAGGCCTCGGCCTGCGTCAAGGCCTCGAAGTTCCAGGCCAGGAACTGTAGGCAGAGCTTCTCCAGCAGGGCGTCCCCTGTGGCCACTGCATAG

CircID chr17:78972428|78972679
ORF Type ORF6
Protein Length 77
Nucleotide Length 234
Protein Sequence LWGHWARPRPASRPRSSRPGTVGRASPAGRPLWPLHRHTGPGASGTRGPGGGGWQRGLRSSPAAAWPHRQRPACGST
Nucleotide Sequence CTGTGGGGACACTGGGCCAGGCCTCGGCCTGCGTCAAGGCCTCGAAGTTCCAGGCCAGGAACTGTAGGCAGAGCTTCTCCAGCAGGGCGTCCCCTGTGGCCACTGCATAGGCATACAGGTCCAGGGGCATCTGGAACGAGGGGTCCTGGGGGAGGAGGATGGCAAAGAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCATAGGCAGAGGCCAGCTTGTGGAAGCACTTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites