CircRNA Information

General Information
circRNA Basic Information
CircID chr17:79936110|79936292
Strand +
CircType exon
Host Gene ENSG00000167291.14;
Algorism CIRI2;
Sequence CTGCACTCCCACACGCCCACCCAGCTGTGTGTCCTCCGCCGAGGGCGAGCCTCTCTGTGACTCTTCTGTAAAATGCACCCCATTCTGCCCACTCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGCATGTGCAAAGCTCTCCATCAGAAGGGTGGTGTGGGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:79936110|79936292 hsa-miR-185-5p 0 0 1
chr17:79936110|79936292 hsa-miR-185-3p 0 0 1
chr17:79936110|79936292 hsa-miR-377-5p 0 0 1
chr17:79936110|79936292 hsa-miR-377-3p 0 0 1
chr17:79936110|79936292 hsa-miR-507 0 0 1
chr17:79936110|79936292 hsa-miR-557 0 0 1
chr17:79936110|79936292 hsa-miR-585-5p 0 0 1
chr17:79936110|79936292 hsa-miR-585-3p 0 0 1
chr17:79936110|79936292 hsa-miR-586 0 0 1
chr17:79936110|79936292 hsa-miR-608 1 0 1
chr17:79936110|79936292 hsa-miR-638 1 1 1
chr17:79936110|79936292 hsa-miR-661 0 0 1
chr17:79936110|79936292 hsa-miR-658 1 1 1
chr17:79936110|79936292 hsa-miR-541-5p 0 0 1
chr17:79936110|79936292 hsa-miR-541-3p 0 0 1
chr17:79936110|79936292 hsa-miR-1237-5p 0 0 1
chr17:79936110|79936292 hsa-miR-1237-3p 0 0 1
chr17:79936110|79936292 hsa-miR-1204 0 0 1
chr17:79936110|79936292 hsa-miR-1293 0 0 1
chr17:79936110|79936292 hsa-miR-1249-5p 0 0 1
chr17:79936110|79936292 hsa-miR-1249-3p 0 0 1
chr17:79936110|79936292 hsa-miR-1307-5p 0 0 1
chr17:79936110|79936292 hsa-miR-1307-3p 0 0 1
chr17:79936110|79936292 hsa-miR-1197 0 0 1
chr17:79936110|79936292 hsa-miR-193a-5p 0 0 1
chr17:79936110|79936292 hsa-miR-654-5p 0 0 1
chr17:79936110|79936292 hsa-miR-1207-3p 0 0 1
chr17:79936110|79936292 hsa-miR-1207-5p 1 0 1
chr17:79936110|79936292 hsa-miR-342-5p 0 0 1
chr17:79936110|79936292 hsa-miR-220b 0 0 1
chr17:79936110|79936292 hsa-miR-1268 0 0 1
chr17:79936110|79936292 hsa-miR-1254 0 0 1
chr17:79936110|79936292 hsa-miR-663 0 0 1
chr17:79936110|79936292 hsa-miR-600 1 0 0
chr17:79936110|79936292 hsa-miR-663a 1 0 0
chr17:79936110|79936292 hsa-miR-762 1 0 0
chr17:79936110|79936292 hsa-miR-298 1 1 0
chr17:79936110|79936292 hsa-miR-1469 1 0 0
chr17:79936110|79936292 hsa-miR-2861 1 0 0
chr17:79936110|79936292 hsa-miR-3132 1 0 0
chr17:79936110|79936292 hsa-miR-3147 1 0 0
chr17:79936110|79936292 hsa-miR-4284 0 1 0
chr17:79936110|79936292 hsa-miR-3936 1 0 0
chr17:79936110|79936292 hsa-miR-1268b 1 1 0
chr17:79936110|79936292 hsa-miR-4430 1 0 0
chr17:79936110|79936292 hsa-miR-4462 1 0 0
chr17:79936110|79936292 hsa-miR-4463 1 0 0
chr17:79936110|79936292 hsa-miR-4481 1 1 0
chr17:79936110|79936292 hsa-miR-4505 1 0 0
chr17:79936110|79936292 hsa-miR-2392 1 0 0
chr17:79936110|79936292 hsa-miR-4651 1 0 0
chr17:79936110|79936292 hsa-miR-4654 1 0 0
chr17:79936110|79936292 hsa-miR-4672 1 0 0
chr17:79936110|79936292 hsa-miR-4674 1 0 0
chr17:79936110|79936292 hsa-miR-5090 1 0 0
chr17:79936110|79936292 hsa-miR-5572 1 0 0
chr17:79936110|79936292 hsa-miR-5787 1 0 0
chr17:79936110|79936292 hsa-miR-6086 1 0 0
chr17:79936110|79936292 hsa-miR-6127 1 0 0
chr17:79936110|79936292 hsa-miR-6860 1 0 0
chr17:79936110|79936292 hsa-miR-8485 0 1 0
chr17:79936110|79936292 hsa-miR-12122 0 1 0
chr17:79936110|79936292 hsa-miR-4433b-3p 1 1 0
chr17:79936110|79936292 hsa-miR-504-3p 1 1 0
chr17:79936110|79936292 hsa-miR-6747-5p 1 0 0
chr17:79936110|79936292 hsa-miR-4433a-3p 1 1 0
chr17:79936110|79936292 hsa-miR-6861-5p 1 0 0
chr17:79936110|79936292 hsa-miR-7106-5p 1 0 0
chr17:79936110|79936292 hsa-miR-6894-5p 1 1 0
chr17:79936110|79936292 hsa-miR-6728-5p 1 0 0
chr17:79936110|79936292 hsa-miR-4768-3p 1 1 0
chr17:79936110|79936292 hsa-miR-6880-5p 1 0 0
chr17:79936110|79936292 hsa-miR-7154-3p 1 1 0
chr17:79936110|79936292 hsa-miR-6890-5p 1 0 0
chr17:79936110|79936292 hsa-miR-6741-5p 1 0 0
chr17:79936110|79936292 hsa-miR-6727-5p 1 0 0
chr17:79936110|79936292 hsa-miR-6721-5p 1 0 0
chr17:79936110|79936292 hsa-miR-197-5p 1 0 0
chr17:79936110|79936292 hsa-miR-5589-5p 1 1 0
chr17:79936110|79936292 hsa-miR-6776-5p 1 1 0
chr17:79936110|79936292 hsa-miR-7108-5p 1 0 0
chr17:79936110|79936292 hsa-miR-3605-5p 0 1 0
chr17:79936110|79936292 hsa-miR-6716-5p 1 0 0
chr17:79936110|79936292 hsa-miR-6748-5p 1 0 0
chr17:79936110|79936292 hsa-miR-6772-5p 1 0 0
chr17:79936110|79936292 hsa-miR-6793-5p 1 0 0
chr17:79936110|79936292 hsa-miR-6796-5p 1 0 0
chr17:79936110|79936292 hsa-miR-6732-5p 1 0 0
chr17:79936110|79936292 hsa-miR-2467-5p 0 1 0
chr17:79936110|79936292 hsa-miR-6782-5p 1 1 0
chr17:79936110|79936292 hsa-miR-1226-5p 1 0 0
chr17:79936110|79936292 hsa-miR-1229-5p 1 0 0
chr17:79936110|79936292 hsa-miR-1908-5p 1 0 0
chr17:79936110|79936292 hsa-miR-1228-5p 1 0 0
chr17:79936110|79936292 hsa-miR-4713-3p 1 0 0
chr17:79936110|79936292 hsa-miR-4743-5p 1 0 0
chr17:79936110|79936292 hsa-miR-6877-5p 1 0 0
chr17:79936110|79936292 hsa-miR-10400-5p 1 0 0
chr17:79936110|79936292 hsa-miR-4763-3p 1 0 0
chr17:79936110|79936292 hsa-miR-6769b-5p 1 1 0
chr17:79936110|79936292 hsa-miR-6778-5p 1 0 0
chr17:79936110|79936292 hsa-miR-6787-5p 1 1 0
chr17:79936110|79936292 hsa-miR-6812-5p 1 1 0
chr17:79936110|79936292 hsa-miR-1343-5p 1 0 0
chr17:79936110|79936292 hsa-miR-6737-5p 1 0 0
chr17:79936110|79936292 hsa-miR-6754-5p 1 0 0
chr17:79936110|79936292 hsa-miR-6756-5p 1 1 0
chr17:79936110|79936292 hsa-miR-6819-5p 1 0 0
chr17:79936110|79936292 hsa-miR-10401-5p 0 1 0
chr17:79936110|79936292 hsa-miR-6722-3p 1 0 0
chr17:79936110|79936292 hsa-miR-10396b-5p 1 0 0
chr17:79936110|79936292 hsa-miR-1909-3p 1 0 0
chr17:79936110|79936292 hsa-miR-328-5p 1 0 0
chr17:79936110|79936292 hsa-miR-4701-3p 1 0 0
chr17:79936110|79936292 hsa-miR-4745-5p 1 0 0
chr17:79936110|79936292 hsa-miR-6735-5p 1 0 0
chr17:79936110|79936292 hsa-miR-939-5p 1 0 0
chr17:79936110|79936292 hsa-miR-4758-5p 1 0 0
chr17:79936110|79936292 hsa-miR-6511a-5p 1 0 0
chr17:79936110|79936292 hsa-miR-4664-5p 1 0 0
chr17:79936110|79936292 hsa-miR-6855-5p 1 0 0
chr17:79936110|79936292 hsa-miR-3679-5p 1 0 0
chr17:79936110|79936292 hsa-miR-6750-5p 1 0 0
chr17:79936110|79936292 hsa-miR-6766-5p 1 0 0
chr17:79936110|79936292 hsa-miR-6785-5p 1 0 0
chr17:79936110|79936292 hsa-miR-769-3p 1 0 0
chr17:79936110|79936292 hsa-miR-320a-3p 1 0 0
chr17:79936110|79936292 hsa-miR-320b 1 0 0
chr17:79936110|79936292 hsa-miR-10395-5p 0 1 0
chr17:79936110|79936292 hsa-miR-10399-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:79936110|79936292
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MHPILPTPATRPILCDPARHVCVNACAKLSIRRVVWA
Nucleotide Sequence ATGCACCCCATTCTGCCCACTCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGCATGTGCAAAGCTCTCCATCAGAAGGGTGGTGTGGGCC
CircID chr17:79936110|79936292
ORF Type ORF2
Protein Length 44
Nucleotide Length 132
Protein Sequence MPGGIAEDGSRGRSGQNGVHFTEESQRGSPSAEDTQLGGRVGVQ
Nucleotide Sequence ATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGAGTGGGCAGAATGGGGTGCATTTTACAGAAGAGTCACAGAGAGGCTCGCCCTCGGCGGAGGACACACAGCTGGGTGGGCGTGTGGGAGTGCAG
CircID chr17:79936110|79936292
ORF Type ORF3
Protein Length 55
Nucleotide Length 165
Protein Sequence MMESFAHAFTHTCLAGSQRMGLVAGVGRMGCILQKSHREARPRRRTHSWVGVWEC
Nucleotide Sequence CTGATGGAGAGCTTTGCACATGCATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGAGTGGGCAGAATGGGGTGCATTTTACAGAAGAGTCACAGAGAGGCTCGCCCTCGGCGGAGGACACACAGCTGGGTGGGCGTGTGGGAGTGC
CircID chr17:79936110|79936292
ORF Type ORF4
Protein Length 51
Nucleotide Length 153
Protein Sequence MHMHSHTHAWRDRRGWVSWQEWAEWGAFYRRVTERLALGGGHTAGWACGSA
Nucleotide Sequence TTGCACATGCATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGAGTGGGCAGAATGGGGTGCATTTTACAGAAGAGTCACAGAGAGGCTCGCCCTCGGCGGAGGACACACAGCTGGGTGGGCGTGTGGGAGTGCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab