CircRNA Information

General Information
circRNA Basic Information
CircID chr17:79937325|79937489
Strand -
CircType exon
Host Gene ENSG00000167291.14;
Algorism CIRI2;
Sequence CTCTGCCAGCCACTACCCCTTAGCCCAAGGGGAGTCCTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCGAGCTTCACACTGGGCTGCTATGGAAAACTGAAAGGTCAGAGGGTGGAGGTCCTCTCCCTCCTGGACATGGAAAC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:79937325|79937489 hsa-miR-15a-5p 0 0 1
chr17:79937325|79937489 hsa-miR-15a-3p 0 0 1
chr17:79937325|79937489 hsa-miR-198 0 0 1
chr17:79937325|79937489 hsa-miR-15b-5p 0 0 1
chr17:79937325|79937489 hsa-miR-15b-3p 0 0 1
chr17:79937325|79937489 hsa-miR-149-5p 0 0 1
chr17:79937325|79937489 hsa-miR-149-3p 0 0 1
chr17:79937325|79937489 hsa-miR-195-5p 0 0 1
chr17:79937325|79937489 hsa-miR-195-3p 0 0 1
chr17:79937325|79937489 hsa-miR-206 0 0 1
chr17:79937325|79937489 hsa-miR-424-5p 0 0 1
chr17:79937325|79937489 hsa-miR-424-3p 0 0 1
chr17:79937325|79937489 hsa-miR-497-5p 0 0 1
chr17:79937325|79937489 hsa-miR-497-3p 0 0 1
chr17:79937325|79937489 hsa-miR-503-5p 0 0 1
chr17:79937325|79937489 hsa-miR-503-3p 0 0 1
chr17:79937325|79937489 hsa-miR-587 0 0 1
chr17:79937325|79937489 hsa-miR-608 1 1 1
chr17:79937325|79937489 hsa-miR-613 0 0 1
chr17:79937325|79937489 hsa-miR-635 0 0 1
chr17:79937325|79937489 hsa-miR-646 0 0 1
chr17:79937325|79937489 hsa-miR-541-5p 0 0 1
chr17:79937325|79937489 hsa-miR-541-3p 0 0 1
chr17:79937325|79937489 hsa-miR-665 0 1 1
chr17:79937325|79937489 hsa-miR-760 0 1 1
chr17:79937325|79937489 hsa-miR-1299 0 0 1
chr17:79937325|79937489 hsa-miR-1307-5p 0 0 1
chr17:79937325|79937489 hsa-miR-1307-3p 0 0 1
chr17:79937325|79937489 hsa-miR-127-5p 0 1 1
chr17:79937325|79937489 hsa-miR-1224-5p 0 1 1
chr17:79937325|79937489 hsa-miR-199a-5p 0 0 1
chr17:79937325|79937489 hsa-miR-654-5p 0 0 1
chr17:79937325|79937489 hsa-miR-875-3p 0 0 1
chr17:79937325|79937489 hsa-miR-199b-5p 0 0 1
chr17:79937325|79937489 hsa-miR-1207-5p 1 1 1
chr17:79937325|79937489 hsa-miR-16 0 0 1
chr17:79937325|79937489 hsa-miR-1 0 0 1
chr17:79937325|79937489 hsa-miR-663 0 0 1
chr17:79937325|79937489 hsa-miR-612 1 1 0
chr17:79937325|79937489 hsa-miR-663a 1 1 0
chr17:79937325|79937489 hsa-miR-762 1 0 0
chr17:79937325|79937489 hsa-miR-1469 1 0 0
chr17:79937325|79937489 hsa-miR-3141 1 0 0
chr17:79937325|79937489 hsa-miR-4302 0 1 0
chr17:79937325|79937489 hsa-miR-4270 1 0 0
chr17:79937325|79937489 hsa-miR-3936 0 1 0
chr17:79937325|79937489 hsa-miR-4436a 0 1 0
chr17:79937325|79937489 hsa-miR-4466 1 0 0
chr17:79937325|79937489 hsa-miR-4488 1 0 0
chr17:79937325|79937489 hsa-miR-4507 1 0 0
chr17:79937325|79937489 hsa-miR-4510 0 1 0
chr17:79937325|79937489 hsa-miR-1587 1 0 0
chr17:79937325|79937489 hsa-miR-4651 1 1 0
chr17:79937325|79937489 hsa-miR-4656 1 1 0
chr17:79937325|79937489 hsa-miR-4706 1 0 0
chr17:79937325|79937489 hsa-miR-4751 0 1 0
chr17:79937325|79937489 hsa-miR-5787 1 0 0
chr17:79937325|79937489 hsa-miR-6128 0 1 0
chr17:79937325|79937489 hsa-miR-6130 0 1 0
chr17:79937325|79937489 hsa-miR-6132 0 1 0
chr17:79937325|79937489 hsa-miR-6860 1 0 0
chr17:79937325|79937489 hsa-miR-8057 0 1 0
chr17:79937325|79937489 hsa-miR-8072 1 0 0
chr17:79937325|79937489 hsa-miR-12115 1 0 0
chr17:79937325|79937489 hsa-miR-6734-5p 1 0 0
chr17:79937325|79937489 hsa-miR-7160-5p 1 0 0
chr17:79937325|79937489 hsa-miR-6759-5p 1 0 0
chr17:79937325|79937489 hsa-miR-6721-5p 1 1 0
chr17:79937325|79937489 hsa-miR-4711-5p 0 1 0
chr17:79937325|79937489 hsa-miR-6796-5p 1 0 0
chr17:79937325|79937489 hsa-miR-6732-5p 1 1 0
chr17:79937325|79937489 hsa-miR-6782-5p 1 1 0
chr17:79937325|79937489 hsa-miR-6786-5p 1 0 0
chr17:79937325|79937489 hsa-miR-1226-5p 1 0 0
chr17:79937325|79937489 hsa-miR-1229-5p 1 1 0
chr17:79937325|79937489 hsa-miR-4640-5p 1 0 0
chr17:79937325|79937489 hsa-miR-1908-5p 1 0 0
chr17:79937325|79937489 hsa-miR-1228-5p 1 0 0
chr17:79937325|79937489 hsa-miR-6861-3p 0 1 0
chr17:79937325|79937489 hsa-miR-4787-5p 1 1 0
chr17:79937325|79937489 hsa-miR-3189-3p 1 1 0
chr17:79937325|79937489 hsa-miR-7112-5p 1 0 0
chr17:79937325|79937489 hsa-miR-664b-5p 1 1 0
chr17:79937325|79937489 hsa-miR-2276-5p 0 1 0
chr17:79937325|79937489 hsa-miR-6865-3p 0 1 0
chr17:79937325|79937489 hsa-miR-518c-5p 0 1 0
chr17:79937325|79937489 hsa-miR-10400-5p 1 0 0
chr17:79937325|79937489 hsa-miR-1233-5p 1 0 0
chr17:79937325|79937489 hsa-miR-4763-3p 1 0 0
chr17:79937325|79937489 hsa-miR-6769b-5p 1 1 0
chr17:79937325|79937489 hsa-miR-6787-5p 1 1 0
chr17:79937325|79937489 hsa-miR-6812-5p 1 0 0
chr17:79937325|79937489 hsa-miR-6816-5p 1 0 0
chr17:79937325|79937489 hsa-miR-6775-5p 1 0 0
chr17:79937325|79937489 hsa-miR-6752-5p 1 0 0
chr17:79937325|79937489 hsa-miR-6756-5p 1 1 0
chr17:79937325|79937489 hsa-miR-6803-5p 1 0 0
chr17:79937325|79937489 hsa-miR-6819-5p 1 0 0
chr17:79937325|79937489 hsa-miR-1249-5p 0 1 0
chr17:79937325|79937489 hsa-miR-6722-3p 1 0 0
chr17:79937325|79937489 hsa-miR-6751-5p 1 0 0
chr17:79937325|79937489 hsa-miR-6774-5p 0 1 0
chr17:79937325|79937489 hsa-miR-6797-5p 0 1 0
chr17:79937325|79937489 hsa-miR-6808-5p 1 0 0
chr17:79937325|79937489 hsa-miR-6879-5p 1 0 0
chr17:79937325|79937489 hsa-miR-3620-5p 1 0 0
chr17:79937325|79937489 hsa-miR-6836-5p 0 1 0
chr17:79937325|79937489 hsa-miR-10396b-5p 1 1 0
chr17:79937325|79937489 hsa-miR-1237-5p 1 0 0
chr17:79937325|79937489 hsa-miR-328-5p 1 0 0
chr17:79937325|79937489 hsa-miR-4632-5p 1 0 0
chr17:79937325|79937489 hsa-miR-4649-5p 1 0 0
chr17:79937325|79937489 hsa-miR-4749-5p 1 0 0
chr17:79937325|79937489 hsa-miR-6729-5p 1 0 0
chr17:79937325|79937489 hsa-miR-6735-5p 1 0 0
chr17:79937325|79937489 hsa-miR-6858-5p 1 0 0
chr17:79937325|79937489 hsa-miR-939-5p 1 0 0
chr17:79937325|79937489 hsa-miR-3940-5p 1 0 0
chr17:79937325|79937489 hsa-miR-6785-5p 1 0 0
chr17:79937325|79937489 hsa-miR-6790-5p 1 0 0
chr17:79937325|79937489 hsa-miR-6791-5p 1 0 0
chr17:79937325|79937489 hsa-miR-4756-5p 0 1 0
chr17:79937325|79937489 hsa-miR-4690-3p 0 1 0
chr17:79937325|79937489 hsa-miR-99b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:79937325|79937489
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MPTPAELHTGLLWKTERSEGGGPLPPGHGN
Nucleotide Sequence CTGCCCACCCCCGCCGAGCTTCACACTGGGCTGCTATGGAAAACTGAAAGGTCAGAGGGTGGAGGTCCTCTCCCTCCTGGACATGGAAAC
CircID chr17:79937325|79937489
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MMPCPPPPSFTLGCYGKLKGQRVEVLSLLDME
Nucleotide Sequence CTGATGCCCTGCCCACCCCCGCCGAGCTTCACACTGGGCTGCTATGGAAAACTGAAAGGTCAGAGGGTGGAGGTCCTCTCCCTCCTGGACATGGAA
CircID chr17:79937325|79937489
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MTFQFSIAAQCEARRGWAGHQDKMKMLALE
Nucleotide Sequence CTGACCTTTCAGTTTTCCATAGCAGCCCAGTGTGAAGCTCGGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab