CircRNA Information

General Information
circRNA Basic Information
CircID chr17:80110744|80111014
Strand -
CircType exon
Host Gene ENSG00000171298.11;
Algorism CIRI2;
Sequence TGCCTTCCCCGACTTCACCAACCCCACAGCCCTGGCCTGGTGGGAGGACATGGTGGCTGAGTTCCATGACCAGGTGCCCTTCGACGGCATGTGGATTGTAAGTGTGGCCCCCTCCTGAGCATCCCCAAGGCCTCTGGGGACTACCCCACCCTCCTCACTCTGGGCAGAGTCACCTACCAGCAGCGCTTCTCTTGCAGGACATGAACGAGCCTTCCAACTTCATCAGGGGCTCTGAGGACGGCTGCCCCAACAATGAGCTGGAGAACCCACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:80110744|80111014 hsa-miR-518e-5p 0 0 1
chr17:80110744|80111014 hsa-miR-518e-3p 0 0 1
chr17:80110744|80111014 hsa-miR-766-5p 0 0 1
chr17:80110744|80111014 hsa-miR-766-3p 0 0 1
chr17:80110744|80111014 hsa-miR-1206 0 0 1
chr17:80110744|80111014 hsa-miR-512-5p 0 1 1
chr17:80110744|80111014 hsa-miR-1225-3p 0 1 1
chr17:80110744|80111014 hsa-miR-491-5p 0 0 1
chr17:80110744|80111014 hsa-miR-486-3p 0 1 1
chr17:80110744|80111014 hsa-miR-532-3p 0 1 1
chr17:80110744|80111014 hsa-miR-542-5p 0 0 1
chr17:80110744|80111014 hsa-miR-1224-3p 0 0 1
chr17:80110744|80111014 hsa-miR-490-5p 0 0 1
chr17:80110744|80111014 hsa-miR-324-3p 0 0 1
chr17:80110744|80111014 hsa-miR-515-5p 0 0 1
chr17:80110744|80111014 hsa-miR-1260 0 0 1
chr17:80110744|80111014 hsa-miR-1280 0 0 1
chr17:80110744|80111014 hsa-miR-138 0 0 1
chr17:80110744|80111014 hsa-miR-198 1 0 0
chr17:80110744|80111014 hsa-miR-760 1 0 0
chr17:80110744|80111014 hsa-miR-1260b 0 1 0
chr17:80110744|80111014 hsa-miR-3188 1 0 0
chr17:80110744|80111014 hsa-miR-4260 0 1 0
chr17:80110744|80111014 hsa-miR-3907 1 0 0
chr17:80110744|80111014 hsa-miR-3918 0 1 0
chr17:80110744|80111014 hsa-miR-4479 1 0 0
chr17:80110744|80111014 hsa-miR-4522 1 1 0
chr17:80110744|80111014 hsa-miR-4525 1 0 0
chr17:80110744|80111014 hsa-miR-4651 1 1 0
chr17:80110744|80111014 hsa-miR-4654 1 0 0
chr17:80110744|80111014 hsa-miR-4688 1 0 0
chr17:80110744|80111014 hsa-miR-4689 0 1 0
chr17:80110744|80111014 hsa-miR-4739 1 0 0
chr17:80110744|80111014 hsa-miR-4741 1 1 0
chr17:80110744|80111014 hsa-miR-4779 0 1 0
chr17:80110744|80111014 hsa-miR-5572 1 0 0
chr17:80110744|80111014 hsa-miR-6085 1 0 0
chr17:80110744|80111014 hsa-miR-6086 0 1 0
chr17:80110744|80111014 hsa-miR-6132 1 0 0
chr17:80110744|80111014 hsa-miR-7706 1 1 0
chr17:80110744|80111014 hsa-miR-9899 1 0 0
chr17:80110744|80111014 hsa-miR-432-3p 1 0 0
chr17:80110744|80111014 hsa-miR-6749-3p 0 1 0
chr17:80110744|80111014 hsa-miR-510-5p 1 0 0
chr17:80110744|80111014 hsa-miR-4433a-3p 1 0 0
chr17:80110744|80111014 hsa-miR-6765-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6857-5p 1 1 0
chr17:80110744|80111014 hsa-miR-1972 0 1 0
chr17:80110744|80111014 hsa-miR-3692-5p 0 1 0
chr17:80110744|80111014 hsa-miR-6089 1 0 0
chr17:80110744|80111014 hsa-miR-4722-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6741-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6727-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6787-3p 0 1 0
chr17:80110744|80111014 hsa-miR-6742-5p 1 1 0
chr17:80110744|80111014 hsa-miR-6793-5p 1 1 0
chr17:80110744|80111014 hsa-miR-6796-5p 1 1 0
chr17:80110744|80111014 hsa-miR-6829-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6732-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6805-5p 0 1 0
chr17:80110744|80111014 hsa-miR-23a-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6798-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6782-5p 1 0 0
chr17:80110744|80111014 hsa-miR-5006-5p 1 0 0
chr17:80110744|80111014 hsa-miR-3934-3p 1 0 0
chr17:80110744|80111014 hsa-miR-6786-5p 1 0 0
chr17:80110744|80111014 hsa-miR-5088-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6784-5p 1 0 0
chr17:80110744|80111014 hsa-miR-4640-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6753-5p 1 0 0
chr17:80110744|80111014 hsa-miR-3127-5p 1 1 0
chr17:80110744|80111014 hsa-miR-6771-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6823-5p 1 1 0
chr17:80110744|80111014 hsa-miR-6749-5p 1 0 0
chr17:80110744|80111014 hsa-miR-4733-3p 0 1 0
chr17:80110744|80111014 hsa-miR-2276-3p 0 1 0
chr17:80110744|80111014 hsa-miR-3189-3p 0 1 0
chr17:80110744|80111014 hsa-miR-6804-3p 0 1 0
chr17:80110744|80111014 hsa-miR-597-3p 0 1 0
chr17:80110744|80111014 hsa-miR-2355-5p 0 1 0
chr17:80110744|80111014 hsa-miR-518c-5p 1 0 0
chr17:80110744|80111014 hsa-miR-3670 0 1 0
chr17:80110744|80111014 hsa-miR-500a-3p 0 1 0
chr17:80110744|80111014 hsa-miR-4763-3p 1 0 0
chr17:80110744|80111014 hsa-miR-6769b-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6812-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6816-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6865-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6737-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6752-5p 1 1 0
chr17:80110744|80111014 hsa-miR-6756-5p 1 1 0
chr17:80110744|80111014 hsa-miR-6803-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6815-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6842-5p 1 0 0
chr17:80110744|80111014 hsa-miR-7110-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6763-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6797-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6879-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6780b-5p 0 1 0
chr17:80110744|80111014 hsa-miR-10396b-5p 1 0 0
chr17:80110744|80111014 hsa-miR-1909-3p 1 0 0
chr17:80110744|80111014 hsa-miR-328-5p 1 0 0
chr17:80110744|80111014 hsa-miR-4649-5p 1 0 0
chr17:80110744|80111014 hsa-miR-4685-5p 1 1 0
chr17:80110744|80111014 hsa-miR-4725-3p 0 1 0
chr17:80110744|80111014 hsa-miR-4745-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6729-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6846-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6848-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6858-5p 1 1 0
chr17:80110744|80111014 hsa-miR-6883-5p 1 1 0
chr17:80110744|80111014 hsa-miR-939-5p 1 0 0
chr17:80110744|80111014 hsa-miR-1266-5p 1 0 0
chr17:80110744|80111014 hsa-miR-3940-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6855-5p 0 1 0
chr17:80110744|80111014 hsa-miR-6891-5p 1 0 0
chr17:80110744|80111014 hsa-miR-6766-5p 0 1 0
chr17:80110744|80111014 hsa-miR-6791-5p 1 0 0
chr17:80110744|80111014 hsa-miR-769-3p 1 0 0
chr17:80110744|80111014 hsa-miR-4691-5p 1 0 0
chr17:80110744|80111014 hsa-miR-5195-3p 1 0 0
chr17:80110744|80111014 hsa-miR-216b-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:80110744|80111014
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MSIPKASGDYPTLLTLGRVTYQQRFSCRT
Nucleotide Sequence CTGAGCATCCCCAAGGCCTCTGGGGACTACCCCACCCTCCTCACTCTGGGCAGAGTCACCTACCAGCAGCGCTTCTCTTGCAGGACATGA
CircID chr17:80110744|80111014
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MAWWEDMVAEFHDQVPFDGMWIVSVAPS
Nucleotide Sequence CTGGCCTGGTGGGAGGACATGGTGGCTGAGTTCCATGACCAGGTGCCCTTCGACGGCATGTGGATTGTAAGTGTGGCCCCCTCCTGA
CircID chr17:80110744|80111014
ORF Type ORF3
Protein Length 33
Nucleotide Length 102
Protein Sequence MGTTPPSSLWAESPTSSASLAGHERAFQLHQGL
Nucleotide Sequence CTGGGGACTACCCCACCCTCCTCACTCTGGGCAGAGTCACCTACCAGCAGCGCTTCTCTTGCAGGACATGAACGAGCCTTCCAACTTCATCAGGGGCTCTGA
CircID chr17:80110744|80111014
ORF Type ORF4
Protein Length 26
Nucleotide Length 78
Protein Sequence MQDMNEPSNFIRGSEDGCPNNELENP
Nucleotide Sequence TTGCAGGACATGAACGAGCCTTCCAACTTCATCAGGGGCTCTGAGGACGGCTGCCCCAACAATGAGCTGGAGAACCCA
CircID chr17:80110744|80111014
ORF Type ORF5
Protein Length 27
Nucleotide Length 84
Protein Sequence MLGQPSSEPLMKLEGSFMSCKRSAAGR
Nucleotide Sequence TTGTTGGGGCAGCCGTCCTCAGAGCCCCTGATGAAGTTGGAAGGCTCGTTCATGTCCTGCAAGAGAAGCGCTGCTGGTAGGTGA
CircID chr17:80110744|80111014
ORF Type ORF6
Protein Length 61
Nucleotide Length 183
Protein Sequence MLVGDSAQSEEGGVVPRGLGDAQEGATLTIHMPSKGTWSWNSATMSSHQARAVGLVKSGKA
Nucleotide Sequence CTGCTGGTAGGTGACTCTGCCCAGAGTGAGGAGGGTGGGGTAGTCCCCAGAGGCCTTGGGGATGCTCAGGAGGGGGCCACACTTACAATCCACATGCCGTCGAAGGGCACCTGGTCATGGAACTCAGCCACCATGTCCTCCCACCAGGCCAGGGCTGTGGGGTTGGTGAAGTCGGGGAAGGCA
CircID chr17:80110744|80111014
ORF Type ORF7
Protein Length 37
Nucleotide Length 114
Protein Sequence MGMLRRGPHLQSTCRRRAPGHGTQPPCPPTRPGLWGW
Nucleotide Sequence TTGGGGATGCTCAGGAGGGGGCCACACTTACAATCCACATGCCGTCGAAGGGCACCTGGTCATGGAACTCAGCCACCATGTCCTCCCACCAGGCCAGGGCTGTGGGGTTGGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab