CircRNA Information

General Information
circRNA Basic Information
CircID chr17:80468244|80468433
Strand +
CircType exon
Host Gene ENSG00000171246.5;
Algorism CIRI2;
Sequence CGCAGACCACCTTCTGCCCCCGTGGGCCAGGTGGGAGCTGTCCGTTCAGGACCATGAGCCATCCTCTGCCCTGACTAGCGAGGGGCAGAGCACACCCCAGTGCTTACGCCTCCACCCCTGCAGCCTCCTGGCCCGCTCACCTTCCTCACCCCTCCTCTGACCCACCCATGGTGCCAGGGCCGAAGCTGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:80468244|80468433 hsa-miR-608 1 1 1
chr17:80468244|80468433 hsa-miR-650 1 0 1
chr17:80468244|80468433 hsa-miR-298 0 0 1
chr17:80468244|80468433 hsa-miR-887-5p 0 0 1
chr17:80468244|80468433 hsa-miR-887-3p 0 0 1
chr17:80468244|80468433 hsa-miR-665 1 1 1
chr17:80468244|80468433 hsa-miR-1205 0 0 1
chr17:80468244|80468433 hsa-miR-1291 0 0 1
chr17:80468244|80468433 hsa-miR-1293 1 0 1
chr17:80468244|80468433 hsa-miR-486-3p 0 0 1
chr17:80468244|80468433 hsa-miR-532-3p 0 0 1
chr17:80468244|80468433 hsa-miR-767-5p 1 1 1
chr17:80468244|80468433 hsa-miR-485-5p 0 0 1
chr17:80468244|80468433 hsa-miR-1224-3p 0 0 1
chr17:80468244|80468433 hsa-miR-324-3p 0 0 1
chr17:80468244|80468433 hsa-miR-342-5p 0 0 1
chr17:80468244|80468433 hsa-miR-1260 0 0 1
chr17:80468244|80468433 hsa-miR-1280 0 0 1
chr17:80468244|80468433 hsa-miR-323-5p 0 0 1
chr17:80468244|80468433 hsa-miR-1308 0 0 1
chr17:80468244|80468433 hsa-miR-24 0 0 1
chr17:80468244|80468433 hsa-miR-612 1 0 0
chr17:80468244|80468433 hsa-miR-637 1 0 0
chr17:80468244|80468433 hsa-miR-638 1 0 0
chr17:80468244|80468433 hsa-miR-658 1 0 0
chr17:80468244|80468433 hsa-miR-765 1 1 0
chr17:80468244|80468433 hsa-miR-760 0 1 0
chr17:80468244|80468433 hsa-miR-1260a 0 1 0
chr17:80468244|80468433 hsa-miR-1262 1 0 0
chr17:80468244|80468433 hsa-miR-1913 0 1 0
chr17:80468244|80468433 hsa-miR-2861 1 0 0
chr17:80468244|80468433 hsa-miR-3132 1 0 0
chr17:80468244|80468433 hsa-miR-3141 1 0 0
chr17:80468244|80468433 hsa-miR-3185 1 0 0
chr17:80468244|80468433 hsa-miR-3196 1 0 0
chr17:80468244|80468433 hsa-miR-4298 1 0 0
chr17:80468244|80468433 hsa-miR-4257 1 0 0
chr17:80468244|80468433 hsa-miR-3621 1 1 0
chr17:80468244|80468433 hsa-miR-3652 1 0 0
chr17:80468244|80468433 hsa-miR-3937 1 0 0
chr17:80468244|80468433 hsa-miR-1268b 1 0 0
chr17:80468244|80468433 hsa-miR-4443 1 1 0
chr17:80468244|80468433 hsa-miR-4466 1 0 0
chr17:80468244|80468433 hsa-miR-4476 1 1 0
chr17:80468244|80468433 hsa-miR-4488 1 0 0
chr17:80468244|80468433 hsa-miR-4506 1 0 0
chr17:80468244|80468433 hsa-miR-2392 1 0 0
chr17:80468244|80468433 hsa-miR-4507 1 0 0
chr17:80468244|80468433 hsa-miR-4533 1 0 0
chr17:80468244|80468433 hsa-miR-4651 1 1 0
chr17:80468244|80468433 hsa-miR-4656 1 0 0
chr17:80468244|80468433 hsa-miR-4689 1 0 0
chr17:80468244|80468433 hsa-miR-4706 1 0 0
chr17:80468244|80468433 hsa-miR-4710 1 1 0
chr17:80468244|80468433 hsa-miR-4739 1 0 0
chr17:80468244|80468433 hsa-miR-5090 1 0 0
chr17:80468244|80468433 hsa-miR-5192 1 0 0
chr17:80468244|80468433 hsa-miR-5194 1 1 0
chr17:80468244|80468433 hsa-miR-5787 1 0 0
chr17:80468244|80468433 hsa-miR-6085 1 0 0
chr17:80468244|80468433 hsa-miR-6127 1 0 0
chr17:80468244|80468433 hsa-miR-6133 1 0 0
chr17:80468244|80468433 hsa-miR-6745 1 1 0
chr17:80468244|80468433 hsa-miR-6860 1 0 0
chr17:80468244|80468433 hsa-miR-7704 1 0 0
chr17:80468244|80468433 hsa-miR-8073 0 1 0
chr17:80468244|80468433 hsa-miR-8086 0 1 0
chr17:80468244|80468433 hsa-miR-12114 1 1 0
chr17:80468244|80468433 hsa-miR-12125 0 1 0
chr17:80468244|80468433 hsa-miR-4433b-3p 1 0 0
chr17:80468244|80468433 hsa-miR-128-1-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6734-5p 1 0 0
chr17:80468244|80468433 hsa-miR-3194-3p 0 1 0
chr17:80468244|80468433 hsa-miR-6747-5p 1 0 0
chr17:80468244|80468433 hsa-miR-4433a-3p 1 0 0
chr17:80468244|80468433 hsa-miR-6765-5p 1 0 0
chr17:80468244|80468433 hsa-miR-125b-1-3p 1 0 0
chr17:80468244|80468433 hsa-miR-7106-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6825-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6894-5p 1 0 0
chr17:80468244|80468433 hsa-miR-4687-3p 1 0 0
chr17:80468244|80468433 hsa-miR-6799-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6510-5p 1 0 0
chr17:80468244|80468433 hsa-miR-8071 1 0 0
chr17:80468244|80468433 hsa-miR-6880-5p 1 1 0
chr17:80468244|80468433 hsa-miR-4695-5p 1 1 0
chr17:80468244|80468433 hsa-miR-4722-5p 1 0 0
chr17:80468244|80468433 hsa-miR-4755-3p 1 0 0
chr17:80468244|80468433 hsa-miR-6741-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6727-5p 1 0 0
chr17:80468244|80468433 hsa-miR-1178-5p 1 0 0
chr17:80468244|80468433 hsa-miR-197-5p 1 0 0
chr17:80468244|80468433 hsa-miR-8069 1 0 0
chr17:80468244|80468433 hsa-miR-3605-5p 0 1 0
chr17:80468244|80468433 hsa-miR-3151-5p 1 0 0
chr17:80468244|80468433 hsa-miR-659-3p 1 0 0
chr17:80468244|80468433 hsa-miR-3180-3p 1 0 0
chr17:80468244|80468433 hsa-miR-6748-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6772-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6793-5p 1 0 0
chr17:80468244|80468433 hsa-miR-185-3p 1 0 0
chr17:80468244|80468433 hsa-miR-6732-5p 1 0 0
chr17:80468244|80468433 hsa-miR-3190-3p 1 0 0
chr17:80468244|80468433 hsa-miR-6805-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6798-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6881-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6782-5p 1 1 0
chr17:80468244|80468433 hsa-miR-6786-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6835-5p 0 1 0
chr17:80468244|80468433 hsa-miR-5088-5p 1 0 0
chr17:80468244|80468433 hsa-miR-1226-5p 1 0 0
chr17:80468244|80468433 hsa-miR-2277-3p 1 0 0
chr17:80468244|80468433 hsa-miR-1229-5p 1 0 0
chr17:80468244|80468433 hsa-miR-4640-5p 1 1 0
chr17:80468244|80468433 hsa-miR-3127-5p 0 1 0
chr17:80468244|80468433 hsa-miR-1228-5p 1 0 0
chr17:80468244|80468433 hsa-miR-877-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6749-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6847-5p 1 1 0
chr17:80468244|80468433 hsa-miR-4787-5p 1 1 0
chr17:80468244|80468433 hsa-miR-149-3p 1 0 0
chr17:80468244|80468433 hsa-miR-6736-3p 0 1 0
chr17:80468244|80468433 hsa-miR-937-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6789-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6802-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6781-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6801-5p 1 1 0
chr17:80468244|80468433 hsa-miR-2277-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6847-3p 0 1 0
chr17:80468244|80468433 hsa-miR-1207-5p 1 0 0
chr17:80468244|80468433 hsa-miR-1233-5p 1 0 0
chr17:80468244|80468433 hsa-miR-1273h-5p 1 0 0
chr17:80468244|80468433 hsa-miR-4763-3p 1 1 0
chr17:80468244|80468433 hsa-miR-6769b-5p 1 1 0
chr17:80468244|80468433 hsa-miR-6778-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6787-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6812-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6816-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6893-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6775-5p 1 0 0
chr17:80468244|80468433 hsa-miR-1343-5p 1 0 0
chr17:80468244|80468433 hsa-miR-5001-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6726-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6737-5p 1 1 0
chr17:80468244|80468433 hsa-miR-6743-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6752-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6754-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6756-5p 1 1 0
chr17:80468244|80468433 hsa-miR-6769a-5p 1 1 0
chr17:80468244|80468433 hsa-miR-6803-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6813-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6819-5p 1 1 0
chr17:80468244|80468433 hsa-miR-6842-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6851-5p 1 0 0
chr17:80468244|80468433 hsa-miR-7110-5p 1 1 0
chr17:80468244|80468433 hsa-miR-11181-3p 1 0 0
chr17:80468244|80468433 hsa-miR-1249-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6722-3p 1 1 0
chr17:80468244|80468433 hsa-miR-6751-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6779-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6780a-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6797-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6879-5p 1 1 0
chr17:80468244|80468433 hsa-miR-7111-5p 1 0 0
chr17:80468244|80468433 hsa-miR-4728-5p 1 1 0
chr17:80468244|80468433 hsa-miR-5196-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6780b-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6836-5p 1 0 0
chr17:80468244|80468433 hsa-miR-1237-5p 1 0 0
chr17:80468244|80468433 hsa-miR-1909-3p 1 0 0
chr17:80468244|80468433 hsa-miR-328-5p 1 1 0
chr17:80468244|80468433 hsa-miR-4632-5p 1 1 0
chr17:80468244|80468433 hsa-miR-4649-5p 1 0 0
chr17:80468244|80468433 hsa-miR-4701-3p 1 0 0
chr17:80468244|80468433 hsa-miR-4725-3p 1 0 0
chr17:80468244|80468433 hsa-miR-4726-5p 1 1 0
chr17:80468244|80468433 hsa-miR-4745-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6729-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6735-5p 1 1 0
chr17:80468244|80468433 hsa-miR-6738-5p 1 1 0
chr17:80468244|80468433 hsa-miR-6846-5p 1 1 0
chr17:80468244|80468433 hsa-miR-6848-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6858-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6883-5p 1 0 0
chr17:80468244|80468433 hsa-miR-3187-5p 1 0 0
chr17:80468244|80468433 hsa-miR-4697-5p 1 0 0
chr17:80468244|80468433 hsa-miR-4758-5p 1 0 0
chr17:80468244|80468433 hsa-miR-10394-3p 1 0 0
chr17:80468244|80468433 hsa-miR-3940-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6758-5p 1 0 0
chr17:80468244|80468433 hsa-miR-4664-5p 1 0 0
chr17:80468244|80468433 hsa-miR-7843-5p 1 1 0
chr17:80468244|80468433 hsa-miR-1914-3p 1 0 0
chr17:80468244|80468433 hsa-miR-6876-5p 0 1 0
chr17:80468244|80468433 hsa-miR-6891-5p 1 0 0
chr17:80468244|80468433 hsa-miR-541-3p 1 0 0
chr17:80468244|80468433 hsa-miR-6766-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6785-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6724-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6805-3p 0 1 0
chr17:80468244|80468433 hsa-miR-4756-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6859-5p 1 0 0
chr17:80468244|80468433 hsa-miR-6884-5p 0 1 0
chr17:80468244|80468433 hsa-miR-363-5p 1 0 0
chr17:80468244|80468433 hsa-miR-7153-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:80468244|80468433
ORF Type ORF1
Protein Length 48
Nucleotide Length 147
Protein Sequence MPPWARWELSVQDHEPSSALTSEGQSTPQCLRLHPCSLLARSPSSPLL
Nucleotide Sequence CTGCCCCCGTGGGCCAGGTGGGAGCTGTCCGTTCAGGACCATGAGCCATCCTCTGCCCTGACTAGCGAGGGGCAGAGCACACCCCAGTGCTTACGCCTCCACCCCTGCAGCCTCCTGGCCCGCTCACCTTCCTCACCCCTCCTCTGA
CircID chr17:80468244|80468433
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MGCALPLASQGRGWLMVLNGQLPPGPRGQKVVC
Nucleotide Sequence CTGGGGTGTGCTCTGCCCCTCGCTAGTCAGGGCAGAGGATGGCTCATGGTCCTGAACGGACAGCTCCCACCTGGCCCACGGGGGCAGAAGGTGGTCTGC
CircID chr17:80468244|80468433
ORF Type ORF3
Protein Length 43
Nucleotide Length 132
Protein Sequence MAPWVGQRRGEEGERARRLQGWRRKHWGVLCPSLVRAEDGSWS
Nucleotide Sequence CTGGCACCATGGGTGGGTCAGAGGAGGGGTGAGGAAGGTGAGCGGGCCAGGAGGCTGCAGGGGTGGAGGCGTAAGCACTGGGGTGTGCTCTGCCCCTCGCTAGTCAGGGCAGAGGATGGCTCATGGTCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab