CircRNA Information

General Information
circRNA Basic Information
CircID chr17:81115818|81115953
Strand +
CircType exon
Host Gene ENSG00000175866.14;
Algorism CIRI2;
Sequence CAGGCAGCCGGGGCCTGGATGTTCTCTACACAGGAACGCACAGATGATGACAGAACAGGCTACATGGGAAGGGCGGGGGAAGCCACCAGATGGGCAGCACTGCAGATGTGGCCATCAGCTGAGGAGGGGGGCAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:81115818|81115953 hsa-miR-210-5p 0 0 1
chr17:81115818|81115953 hsa-miR-210-3p 0 0 1
chr17:81115818|81115953 hsa-miR-346 0 0 1
chr17:81115818|81115953 hsa-miR-588 0 0 1
chr17:81115818|81115953 hsa-miR-596 0 0 1
chr17:81115818|81115953 hsa-miR-1205 0 0 1
chr17:81115818|81115953 hsa-miR-1249-5p 0 0 1
chr17:81115818|81115953 hsa-miR-1249-3p 0 0 1
chr17:81115818|81115953 hsa-miR-512-3p 0 0 1
chr17:81115818|81115953 hsa-miR-1184 0 0 1
chr17:81115818|81115953 hsa-miR-1207-3p 0 0 1
chr17:81115818|81115953 hsa-miR-324-3p 0 0 1
chr17:81115818|81115953 hsa-miR-1913 1 0 0
chr17:81115818|81115953 hsa-miR-4456 1 0 0
chr17:81115818|81115953 hsa-miR-143-5p 1 0 0
chr17:81115818|81115953 hsa-miR-18a-3p 1 0 0
chr17:81115818|81115953 hsa-miR-15a-3p 1 0 0
chr17:81115818|81115953 hsa-miR-6836-3p 1 0 0
chr17:81115818|81115953 hsa-miR-6882-3p 1 0 0
chr17:81115818|81115953 hsa-miR-6815-3p 1 0 0
chr17:81115818|81115953 hsa-miR-6769a-3p 1 0 0
chr17:81115818|81115953 hsa-miR-6743-3p 1 0 0
chr17:81115818|81115953 hsa-miR-4687-5p 1 0 0
chr17:81115818|81115953 hsa-miR-4632-3p 1 0 0
chr17:81115818|81115953 hsa-miR-6886-3p 1 0 0
chr17:81115818|81115953 hsa-miR-4727-5p 1 0 0
chr17:81115818|81115953 hsa-miR-3127-3p 1 0 0
chr17:81115818|81115953 hsa-miR-5008-3p 1 0 0
chr17:81115818|81115953 hsa-miR-10398-5p 1 0 0
chr17:81115818|81115953 hsa-miR-2682-3p 1 0 0
chr17:81115818|81115953 hsa-miR-6756-3p 1 0 0
chr17:81115818|81115953 hsa-miR-10401-3p 1 0 0
chr17:81115818|81115953 hsa-miR-6801-3p 1 0 0
chr17:81115818|81115953 hsa-miR-6829-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr17:81115818|81115953
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MFSTQERTDDDRTGYMGRAGEATRWAALQMWPSAEEGGR
Nucleotide Sequence ATGTTCTCTACACAGGAACGCACAGATGATGACAGAACAGGCTACATGGGAAGGGCGGGGGAAGCCACCAGATGGGCAGCACTGCAGATGTGGCCATCAGCTGAGGAGGGGGGCAGA

CircID chr17:81115818|81115953
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MMTEQATWEGRGKPPDGQHCRCGHQLRRGAD
Nucleotide Sequence ATGATGACAGAACAGGCTACATGGGAAGGGCGGGGGAAGCCACCAGATGGGCAGCACTGCAGATGTGGCCATCAGCTGAGGAGGGGGGCAGAC

CircID chr17:81115818|81115953
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MMATSAVLPIWWLPPPFPCSLFCHHLCVPV
Nucleotide Sequence CTGATGGCCACATCTGCAGTGCTGCCCATCTGGTGGCTTCCCCCGCCCTTCCCATGTAGCCTGTTCTGTCATCATCTGTGCGTTCCTGTGTAG

CircID chr17:81115818|81115953
ORF Type ORF4
Protein Length 35
Nucleotide Length 105
Protein Sequence MQCCPSGGFPRPSHVACSVIICAFLCREHPGPGCL
Nucleotide Sequence CTGCAGTGCTGCCCATCTGGTGGCTTCCCCCGCCCTTCCCATGTAGCCTGTTCTGTCATCATCTGTGCGTTCCTGTGTAGAGAACATCCAGGCCCCGGCTGCCTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites