CircRNA Information

General Information
circRNA Basic Information
CircID chr17:81252403|81252594
Strand -
CircType exon
Host Gene ENSG00000157637.11;
Algorism CIRI2;
Sequence TTTCTGGGGATCTTCAGGAAGATCACCCGCCTCCTCCAAGGCCTGGGCCTGTCCAGGCCTCTTCCCAACCTCTCCCTGCTCCGGCTCTTGTTTCTCTCTTTCTGAGTCGGGCAGAGGCGGCGCCATCTGGCCCTGGACCCCTGGAGCCTTTCCGCCCGCGTGTCTGGATGGAGGTTTGTTCTCTTCTGGCAC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:81252403|81252594 hsa-miR-335-5p 0 0 1
chr17:81252403|81252594 hsa-miR-335-3p 0 0 1
chr17:81252403|81252594 hsa-miR-432-5p 0 0 1
chr17:81252403|81252594 hsa-miR-432-3p 0 0 1
chr17:81252403|81252594 hsa-miR-495-5p 0 0 1
chr17:81252403|81252594 hsa-miR-495-3p 0 0 1
chr17:81252403|81252594 hsa-miR-652-5p 0 0 1
chr17:81252403|81252594 hsa-miR-652-3p 0 0 1
chr17:81252403|81252594 hsa-miR-765 0 0 1
chr17:81252403|81252594 hsa-miR-1200 0 0 1
chr17:81252403|81252594 hsa-miR-1203 0 0 1
chr17:81252403|81252594 hsa-miR-615-5p 0 0 1
chr17:81252403|81252594 hsa-miR-566 0 0 1
chr17:81252403|81252594 hsa-miR-324-3p 0 0 1
chr17:81252403|81252594 hsa-miR-1254 0 0 1
chr17:81252403|81252594 hsa-miR-768-5p 0 0 1
chr17:81252403|81252594 hsa-miR-886-3p 0 0 1
chr17:81252403|81252594 hsa-miR-3918 0 1 0
chr17:81252403|81252594 hsa-miR-3936 0 1 0
chr17:81252403|81252594 hsa-miR-4441 0 1 0
chr17:81252403|81252594 hsa-miR-4488 1 0 0
chr17:81252403|81252594 hsa-miR-4644 0 1 0
chr17:81252403|81252594 hsa-miR-4688 1 0 0
chr17:81252403|81252594 hsa-miR-4739 1 1 0
chr17:81252403|81252594 hsa-miR-4767 1 0 0
chr17:81252403|81252594 hsa-miR-5194 0 1 0
chr17:81252403|81252594 hsa-miR-6077 0 1 0
chr17:81252403|81252594 hsa-miR-6081 1 0 0
chr17:81252403|81252594 hsa-miR-6086 1 1 0
chr17:81252403|81252594 hsa-miR-6133 0 1 0
chr17:81252403|81252594 hsa-miR-12127 0 1 0
chr17:81252403|81252594 hsa-miR-4747-3p 0 1 0
chr17:81252403|81252594 hsa-miR-6510-5p 0 1 0
chr17:81252403|81252594 hsa-miR-4695-5p 0 1 0
chr17:81252403|81252594 hsa-miR-6746-5p 1 0 0
chr17:81252403|81252594 hsa-miR-6730-5p 1 0 0
chr17:81252403|81252594 hsa-miR-3180-3p 1 1 0
chr17:81252403|81252594 hsa-miR-6798-5p 1 0 0
chr17:81252403|81252594 hsa-miR-6760-5p 0 1 0
chr17:81252403|81252594 hsa-miR-6784-5p 1 0 0
chr17:81252403|81252594 hsa-miR-4640-5p 0 1 0
chr17:81252403|81252594 hsa-miR-1228-5p 1 0 0
chr17:81252403|81252594 hsa-miR-4743-5p 1 1 0
chr17:81252403|81252594 hsa-miR-4638-3p 0 1 0
chr17:81252403|81252594 hsa-miR-6781-5p 1 0 0
chr17:81252403|81252594 hsa-miR-2277-5p 1 1 0
chr17:81252403|81252594 hsa-miR-5197-3p 0 1 0
chr17:81252403|81252594 hsa-miR-3186-3p 0 1 0
chr17:81252403|81252594 hsa-miR-1207-5p 1 1 0
chr17:81252403|81252594 hsa-miR-1233-5p 1 0 0
chr17:81252403|81252594 hsa-miR-4763-3p 1 0 0
chr17:81252403|81252594 hsa-miR-6816-5p 1 0 0
chr17:81252403|81252594 hsa-miR-6775-5p 1 1 0
chr17:81252403|81252594 hsa-miR-6743-5p 1 0 0
chr17:81252403|81252594 hsa-miR-6754-5p 0 1 0
chr17:81252403|81252594 hsa-miR-6756-5p 1 0 0
chr17:81252403|81252594 hsa-miR-11181-3p 0 1 0
chr17:81252403|81252594 hsa-miR-6722-3p 1 1 0
chr17:81252403|81252594 hsa-miR-6879-5p 1 0 0
chr17:81252403|81252594 hsa-miR-7111-5p 1 0 0
chr17:81252403|81252594 hsa-miR-4728-5p 1 0 0
chr17:81252403|81252594 hsa-miR-6836-5p 1 0 0
chr17:81252403|81252594 hsa-miR-1237-5p 1 0 0
chr17:81252403|81252594 hsa-miR-4685-5p 1 1 0
chr17:81252403|81252594 hsa-miR-4726-5p 1 1 0
chr17:81252403|81252594 hsa-miR-4749-5p 1 0 0
chr17:81252403|81252594 hsa-miR-939-5p 1 0 0
chr17:81252403|81252594 hsa-miR-6762-5p 0 1 0
chr17:81252403|81252594 hsa-miR-6837-5p 0 1 0
chr17:81252403|81252594 hsa-miR-6859-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:81252403|81252594
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MGIFRKITRLLQGLGLSRPLPNLSLLRLLFLSF
Nucleotide Sequence CTGGGGATCTTCAGGAAGATCACCCGCCTCCTCCAAGGCCTGGGCCTGTCCAGGCCTCTTCCCAACCTCTCCCTGCTCCGGCTCTTGTTTCTCTCTTTCTGA
CircID chr17:81252403|81252594
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MSRAEAAPSGPGPLEPFRPRVWMEVCSLLA
Nucleotide Sequence CTGAGTCGGGCAGAGGCGGCGCCATCTGGCCCTGGACCCCTGGAGCCTTTCCGCCCGCGTGTCTGGATGGAGGTTTGTTCTCTTCTGGCA
CircID chr17:81252403|81252594
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MAPPLPDSEREKQEPEQGEVGKRPGQAQALEEAGDLPEDPQK
Nucleotide Sequence ATGGCGCCGCCTCTGCCCGACTCAGAAAGAGAGAAACAAGAGCCGGAGCAGGGAGAGGTTGGGAAGAGGCCTGGACAGGCCCAGGCCTTGGAGGAGGCGGGTGATCTTCCTGAAGATCCCCAGAAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab