CircRNA Information

General Information
circRNA Basic Information
CircID chr17:81511252|81511393
Strand -
CircType exon
Host Gene ENSG00000184009.8;
Algorism CIRI2;
Sequence CTGGCCATCGGGCAGCTCGTAGCTCTTCTCCAGAGAAGAGGAGGATGCGGCGGTGGCCATCTCCTGCTCGAAGTCCAGGGCGACGTAGCACAGCTTCTCCTTGATGTCGCGCACGATTTCCCGCTCGGCCGTGGTGGTGAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:81511252|81511393 hsa-miR-22-5p 0 0 1
chr17:81511252|81511393 hsa-miR-22-3p 0 0 1
chr17:81511252|81511393 hsa-miR-197-5p 0 0 1
chr17:81511252|81511393 hsa-miR-197-3p 0 0 1
chr17:81511252|81511393 hsa-miR-326 0 0 1
chr17:81511252|81511393 hsa-miR-422a 0 1 1
chr17:81511252|81511393 hsa-miR-412-5p 0 0 1
chr17:81511252|81511393 hsa-miR-412-3p 0 0 1
chr17:81511252|81511393 hsa-miR-558 0 0 1
chr17:81511252|81511393 hsa-miR-588 0 0 1
chr17:81511252|81511393 hsa-miR-942-5p 0 0 1
chr17:81511252|81511393 hsa-miR-942-3p 0 0 1
chr17:81511252|81511393 hsa-miR-1181 1 0 1
chr17:81511252|81511393 hsa-miR-1249-5p 0 0 1
chr17:81511252|81511393 hsa-miR-1249-3p 0 0 1
chr17:81511252|81511393 hsa-miR-1253 0 0 1
chr17:81511252|81511393 hsa-miR-330-5p 0 0 1
chr17:81511252|81511393 hsa-miR-220b 0 0 1
chr17:81511252|81511393 hsa-miR-378 0 0 1
chr17:81511252|81511393 hsa-miR-516b 0 0 1
chr17:81511252|81511393 hsa-miR-378b 0 1 0
chr17:81511252|81511393 hsa-miR-378c 1 1 0
chr17:81511252|81511393 hsa-miR-3683 0 1 0
chr17:81511252|81511393 hsa-miR-378e 0 1 0
chr17:81511252|81511393 hsa-miR-378f 0 1 0
chr17:81511252|81511393 hsa-miR-378h 0 1 0
chr17:81511252|81511393 hsa-miR-4479 1 0 0
chr17:81511252|81511393 hsa-miR-4516 0 1 0
chr17:81511252|81511393 hsa-miR-4531 0 1 0
chr17:81511252|81511393 hsa-miR-378i 0 1 0
chr17:81511252|81511393 hsa-miR-4706 1 0 0
chr17:81511252|81511393 hsa-miR-6165 0 1 0
chr17:81511252|81511393 hsa-miR-8058 0 1 0
chr17:81511252|81511393 hsa-miR-6746-5p 1 0 0
chr17:81511252|81511393 hsa-miR-4722-5p 0 1 0
chr17:81511252|81511393 hsa-miR-877-3p 0 1 0
chr17:81511252|81511393 hsa-miR-4691-3p 1 0 0
chr17:81511252|81511393 hsa-miR-5196-3p 0 1 0
chr17:81511252|81511393 hsa-miR-3690 0 1 0
chr17:81511252|81511393 hsa-miR-6878-5p 0 1 0
chr17:81511252|81511393 hsa-miR-6785-3p 0 1 0
chr17:81511252|81511393 hsa-miR-518c-5p 0 1 0
chr17:81511252|81511393 hsa-miR-6775-5p 1 0 0
chr17:81511252|81511393 hsa-miR-6754-3p 0 1 0
chr17:81511252|81511393 hsa-miR-378a-3p 0 1 0
chr17:81511252|81511393 hsa-miR-4701-5p 0 1 0
chr17:81511252|81511393 hsa-miR-378d 0 1 0
chr17:81511252|81511393 hsa-miR-7157-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:81511252|81511393
ORF Type ORF1
Protein Length 47
Nucleotide Length 141
Protein Sequence LAIGQLVALLQRRGGCGGGHLLLEVQGDVAQLLLDVAHDFPLGRGGE
Nucleotide Sequence CTGGCCATCGGGCAGCTCGTAGCTCTTCTCCAGAGAAGAGGAGGATGCGGCGGTGGCCATCTCCTGCTCGAAGTCCAGGGCGACGTAGCACAGCTTCTCCTTGATGTCGCGCACGATTTCCCGCTCGGCCGTGGTGGTGAA

CircID chr17:81511252|81511393
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MCYVALDFEQEMATAASSSSLEKSYELPDGQ
Nucleotide Sequence CTGTGCTACGTCGCCCTGGACTTCGAGCAGGAGATGGCCACCGCCGCATCCTCCTCTTCTCTGGAGAAGAGCTACGAGCTGCCCGATGGCCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites