CircRNA Information

General Information
circRNA Basic Information
CircID chr17:81511571|81511944
Strand -
CircType exon
Host Gene ENSG00000184009.8;
Algorism CIRI2;
Sequence AGCACGGCCTGGATGGCCACGTACATGGCCGGGGTGTTGAAGGTCTCAAACATAATCTGAGAAGGGACAAGGGGCGGCTTAGTCAGGGACAGAGACCCACGGCCACCCCATGCTCACACGCCACAACATGCTGCATGCCAGTGTGATGTGTGGAGAAAAGAAAAGAACGCAGGCAGAAACCAAATGAGAAACCTGGAGGCTTCAGGGAGGAAATGCCGGGAGAGGAACAGAGCCTGGAACAGCGAAAGAAACACTTAAATGTCAGAAATCAAGCCGGGCAGAAAATGACTGGGGAAAGGACGGGAGGAGCACGGGCGTCGGCCGAGCCTCACCTGAGTCATCTTCTCTCTGTTGGCCTTGGGGTTCAGGGGGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:81511571|81511944 hsa-miR-107 0 0 1
chr17:81511571|81511944 hsa-miR-484 1 1 1
chr17:81511571|81511944 hsa-miR-510-5p 0 0 1
chr17:81511571|81511944 hsa-miR-510-3p 0 0 1
chr17:81511571|81511944 hsa-miR-579-5p 0 0 1
chr17:81511571|81511944 hsa-miR-579-3p 0 0 1
chr17:81511571|81511944 hsa-miR-593-5p 0 0 1
chr17:81511571|81511944 hsa-miR-593-3p 0 0 1
chr17:81511571|81511944 hsa-miR-595 0 0 1
chr17:81511571|81511944 hsa-miR-608 0 1 1
chr17:81511571|81511944 hsa-miR-639 0 0 1
chr17:81511571|81511944 hsa-miR-659-5p 0 0 1
chr17:81511571|81511944 hsa-miR-659-3p 0 0 1
chr17:81511571|81511944 hsa-miR-421 0 0 1
chr17:81511571|81511944 hsa-miR-760 0 0 1
chr17:81511571|81511944 hsa-miR-1238-5p 0 0 1
chr17:81511571|81511944 hsa-miR-1238-3p 0 0 1
chr17:81511571|81511944 hsa-miR-1204 0 0 1
chr17:81511571|81511944 hsa-miR-1247-5p 0 0 1
chr17:81511571|81511944 hsa-miR-1247-3p 0 0 1
chr17:81511571|81511944 hsa-miR-1253 0 1 1
chr17:81511571|81511944 hsa-miR-125a-3p 0 1 1
chr17:81511571|81511944 hsa-miR-769-5p 0 0 1
chr17:81511571|81511944 hsa-miR-485-5p 0 0 1
chr17:81511571|81511944 hsa-miR-193a-5p 0 0 1
chr17:81511571|81511944 hsa-miR-324-3p 0 0 1
chr17:81511571|81511944 hsa-miR-342-5p 0 0 1
chr17:81511571|81511944 hsa-miR-125a-5p 0 0 1
chr17:81511571|81511944 hsa-miR-515-5p 0 0 1
chr17:81511571|81511944 hsa-miR-125b 0 0 1
chr17:81511571|81511944 hsa-miR-103 0 0 1
chr17:81511571|81511944 hsa-miR-544 0 0 1
chr17:81511571|81511944 hsa-miR-499-3p 0 0 1
chr17:81511571|81511944 hsa-miR-326 1 0 0
chr17:81511571|81511944 hsa-miR-661 1 0 0
chr17:81511571|81511944 hsa-miR-657 1 0 0
chr17:81511571|81511944 hsa-miR-3155a 0 1 0
chr17:81511571|81511944 hsa-miR-3183 1 1 0
chr17:81511571|81511944 hsa-miR-4313 1 0 0
chr17:81511571|81511944 hsa-miR-4316 0 1 0
chr17:81511571|81511944 hsa-miR-4268 0 1 0
chr17:81511571|81511944 hsa-miR-3615 1 0 0
chr17:81511571|81511944 hsa-miR-3155b 0 1 0
chr17:81511571|81511944 hsa-miR-3976 0 1 0
chr17:81511571|81511944 hsa-miR-4651 0 1 0
chr17:81511571|81511944 hsa-miR-4674 1 0 0
chr17:81511571|81511944 hsa-miR-4721 1 0 0
chr17:81511571|81511944 hsa-miR-7974 0 1 0
chr17:81511571|81511944 hsa-miR-6749-3p 1 1 0
chr17:81511571|81511944 hsa-miR-3194-3p 1 0 0
chr17:81511571|81511944 hsa-miR-4665-3p 1 1 0
chr17:81511571|81511944 hsa-miR-6822-3p 1 0 0
chr17:81511571|81511944 hsa-miR-6881-3p 1 1 0
chr17:81511571|81511944 hsa-miR-3692-3p 0 1 0
chr17:81511571|81511944 hsa-miR-4753-5p 0 1 0
chr17:81511571|81511944 hsa-miR-6875-3p 1 0 0
chr17:81511571|81511944 hsa-miR-3187-3p 0 1 0
chr17:81511571|81511944 hsa-miR-7110-3p 1 0 0
chr17:81511571|81511944 hsa-miR-1915-5p 1 0 0
chr17:81511571|81511944 hsa-miR-6845-3p 1 0 0
chr17:81511571|81511944 hsa-miR-423-3p 1 0 0
chr17:81511571|81511944 hsa-miR-877-3p 1 0 0
chr17:81511571|81511944 hsa-miR-2467-5p 1 1 0
chr17:81511571|81511944 hsa-miR-6888-5p 0 1 0
chr17:81511571|81511944 hsa-miR-6735-3p 1 0 0
chr17:81511571|81511944 hsa-miR-345-3p 0 1 0
chr17:81511571|81511944 hsa-miR-6772-3p 0 1 0
chr17:81511571|81511944 hsa-miR-6763-3p 1 0 0
chr17:81511571|81511944 hsa-miR-1908-3p 1 0 0
chr17:81511571|81511944 hsa-miR-6894-3p 0 1 0
chr17:81511571|81511944 hsa-miR-7161-3p 1 1 0
chr17:81511571|81511944 hsa-miR-7113-3p 1 1 0
chr17:81511571|81511944 hsa-miR-7111-3p 1 1 0
chr17:81511571|81511944 hsa-miR-4640-3p 1 0 0
chr17:81511571|81511944 hsa-miR-7843-3p 1 1 0
chr17:81511571|81511944 hsa-miR-6786-3p 0 1 0
chr17:81511571|81511944 hsa-miR-4646-3p 1 0 0
chr17:81511571|81511944 hsa-miR-1236-3p 1 1 0
chr17:81511571|81511944 hsa-miR-6743-3p 1 1 0
chr17:81511571|81511944 hsa-miR-6811-3p 0 1 0
chr17:81511571|81511944 hsa-miR-7106-3p 1 0 0
chr17:81511571|81511944 hsa-miR-6854-3p 0 1 0
chr17:81511571|81511944 hsa-miR-4732-3p 1 0 0
chr17:81511571|81511944 hsa-miR-6719-3p 0 1 0
chr17:81511571|81511944 hsa-miR-3180-5p 1 0 0
chr17:81511571|81511944 hsa-miR-6778-3p 1 1 0
chr17:81511571|81511944 hsa-miR-4774-5p 0 1 0
chr17:81511571|81511944 hsa-miR-6741-3p 0 1 0
chr17:81511571|81511944 hsa-miR-4632-3p 0 1 0
chr17:81511571|81511944 hsa-miR-6746-3p 1 1 0
chr17:81511571|81511944 hsa-miR-6738-3p 1 1 0
chr17:81511571|81511944 hsa-miR-937-3p 1 0 0
chr17:81511571|81511944 hsa-miR-676-5p 0 1 0
chr17:81511571|81511944 hsa-miR-6789-3p 1 1 0
chr17:81511571|81511944 hsa-miR-6780b-3p 0 1 0
chr17:81511571|81511944 hsa-miR-4727-5p 1 0 0
chr17:81511571|81511944 hsa-miR-329-5p 0 1 0
chr17:81511571|81511944 hsa-miR-5002-5p 1 1 0
chr17:81511571|81511944 hsa-miR-6800-3p 1 1 0
chr17:81511571|81511944 hsa-miR-6737-5p 0 1 0
chr17:81511571|81511944 hsa-miR-4685-3p 1 0 0
chr17:81511571|81511944 hsa-miR-4685-5p 1 0 0
chr17:81511571|81511944 hsa-miR-6791-3p 1 0 0
chr17:81511571|81511944 hsa-miR-6792-3p 1 0 0
chr17:81511571|81511944 hsa-miR-6810-3p 1 0 0
chr17:81511571|81511944 hsa-miR-6837-5p 1 1 0
chr17:81511571|81511944 hsa-miR-6775-3p 1 0 0
chr17:81511571|81511944 hsa-miR-3059-5p 1 1 0
chr17:81511571|81511944 hsa-miR-4723-3p 1 0 0
chr17:81511571|81511944 hsa-miR-4691-5p 1 0 0
chr17:81511571|81511944 hsa-miR-6876-3p 1 0 0
chr17:81511571|81511944 hsa-miR-6833-3p 0 1 0
chr17:81511571|81511944 hsa-miR-5588-5p 0 1 0
chr17:81511571|81511944 hsa-miR-4799-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:81511571|81511944
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MLTRHNMLHASVMCGEKKRTQAETK
Nucleotide Sequence ATGCTCACACGCCACAACATGCTGCATGCCAGTGTGATGTGTGGAGAAAAGAAAAGAACGCAGGCAGAAACCAAATGA
CircID chr17:81511571|81511944
ORF Type ORF2
Protein Length 45
Nucleotide Length 138
Protein Sequence MDGHVHGRGVEGLKHNLRRDKGRLSQGQRPTATPCSHATTCCMPV
Nucleotide Sequence CTGGATGGCCACGTACATGGCCGGGGTGTTGAAGGTCTCAAACATAATCTGAGAAGGGACAAGGGGCGGCTTAGTCAGGGACAGAGACCCACGGCCACCCCATGCTCACACGCCACAACATGCTGCATGCCAGTGTGA
CircID chr17:81511571|81511944
ORF Type ORF3
Protein Length 54
Nucleotide Length 162
Protein Sequence MPGEEQSLEQRKKHLNVRNQAGQKMTGERTGGARASAEPHLSHLLSVGLGVQGG
Nucleotide Sequence ATGCCGGGAGAGGAACAGAGCCTGGAACAGCGAAAGAAACACTTAAATGTCAGAAATCAAGCCGGGCAGAAAATGACTGGGGAAAGGACGGGAGGAGCACGGGCGTCGGCCGAGCCTCACCTGAGTCATCTTCTCTCTGTTGGCCTTGGGGTTCAGGGGGGC
CircID chr17:81511571|81511944
ORF Type ORF4
Protein Length 37
Nucleotide Length 114
Protein Sequence MNPKANREKMTQVRLGRRPCSSRPFPSHFLPGLISDI
Nucleotide Sequence CTGAACCCCAAGGCCAACAGAGAGAAGATGACTCAGGTGAGGCTCGGCCGACGCCCGTGCTCCTCCCGTCCTTTCCCCAGTCATTTTCTGCCCGGCTTGATTTCTGACATTTAA
CircID chr17:81511571|81511944
ORF Type ORF5
Protein Length 42
Nucleotide Length 129
Protein Sequence MFQALFLSRHFLPEASRFLIWFLPAFFSFLHTSHWHAACCGV
Nucleotide Sequence CTGTTCCAGGCTCTGTTCCTCTCCCGGCATTTCCTCCCTGAAGCCTCCAGGTTTCTCATTTGGTTTCTGCCTGCGTTCTTTTCTTTTCTCCACACATCACACTGGCATGCAGCATGTTGTGGCGTGTGA
CircID chr17:81511571|81511944
ORF Type ORF6
Protein Length 30
Nucleotide Length 90
Protein Sequence MSLTKPPLVPSQIMFETFNTPAMYVAIQAV
Nucleotide Sequence CTGTCCCTGACTAAGCCGCCCCTTGTCCCTTCTCAGATTATGTTTGAGACCTTCAACACCCCGGCCATGTACGTGGCCATCCAGGCCGTG
CircID chr17:81511571|81511944
ORF Type ORF7
Protein Length 60
Nucleotide Length 183
Protein Sequence MTFKCFFRCSRLCSSPGISSLKPPGFSFGFCLRSFLFSTHHTGMQHVVACEHGVAVGLCP
Nucleotide Sequence CTGACATTTAAGTGTTTCTTTCGCTGTTCCAGGCTCTGTTCCTCTCCCGGCATTTCCTCCCTGAAGCCTCCAGGTTTCTCATTTGGTTTCTGCCTGCGTTCTTTTCTTTTCTCCACACATCACACTGGCATGCAGCATGTTGTGGCGTGTGAGCATGGGGTGGCCGTGGGTCTCTGTCCCTGA
CircID chr17:81511571|81511944
ORF Type ORF8
Protein Length 34
Nucleotide Length 105
Protein Sequence MVSACVLFFSPHITLACSMLWRVSMGWPWVSVPD
Nucleotide Sequence TTGGTTTCTGCCTGCGTTCTTTTCTTTTCTCCACACATCACACTGGCATGCAGCATGTTGTGGCGTGTGAGCATGGGGTGGCCGTGGGTCTCTGTCCCTGACTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab