CircRNA Information

General Information
circRNA Basic Information
CircID chr17:8159310|8159453
Strand -
CircType exon
Host Gene ENSG00000220205.7;
Algorism CIRI2;
Sequence CACAGCTTAGATATCCCTGCTCCCCCTCCACACAGAAAACCAGAAGTGTGGGGGGAAGAAAGTTTGGGGGCCCCCTCCCGTGGCAGGTTAAGGGACTGTACCCTCAAACCCTTAAAATTGTGCCATTTAAAAAGACAATAGACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:8159310|8159453 hsa-miR-183-5p 0 0 1
chr17:8159310|8159453 hsa-miR-183-3p 0 0 1
chr17:8159310|8159453 hsa-miR-511-5p 0 0 1
chr17:8159310|8159453 hsa-miR-511-3p 0 0 1
chr17:8159310|8159453 hsa-miR-522-5p 0 0 1
chr17:8159310|8159453 hsa-miR-522-3p 0 0 1
chr17:8159310|8159453 hsa-miR-649 0 0 1
chr17:8159310|8159453 hsa-miR-939-5p 0 0 1
chr17:8159310|8159453 hsa-miR-939-3p 0 0 1
chr17:8159310|8159453 hsa-miR-1304-5p 0 0 1
chr17:8159310|8159453 hsa-miR-1304-3p 0 0 1
chr17:8159310|8159453 hsa-miR-296-5p 0 0 1
chr17:8159310|8159453 hsa-miR-490-3p 0 0 1
chr17:8159310|8159453 hsa-miR-590-3p 0 0 1
chr17:8159310|8159453 hsa-miR-644 0 0 1
chr17:8159310|8159453 hsa-miR-147 0 0 1
chr17:8159310|8159453 hsa-miR-3911 0 1 0
chr17:8159310|8159453 hsa-miR-5698 0 1 0
chr17:8159310|8159453 hsa-miR-12121 0 1 0
chr17:8159310|8159453 hsa-miR-29b-1-5p 0 1 0
chr17:8159310|8159453 hsa-miR-7847-3p 0 1 0
chr17:8159310|8159453 hsa-miR-6867-5p 0 1 0
chr17:8159310|8159453 hsa-miR-6875-3p 0 1 0
chr17:8159310|8159453 hsa-miR-3679-3p 0 1 0
chr17:8159310|8159453 hsa-miR-7856-5p 0 1 0
chr17:8159310|8159453 hsa-miR-2114-5p 0 1 0
chr17:8159310|8159453 hsa-miR-1910-5p 1 1 0
chr17:8159310|8159453 hsa-miR-582-5p 0 1 0
chr17:8159310|8159453 hsa-miR-6870-5p 0 1 0
chr17:8159310|8159453 hsa-miR-7111-5p 0 1 0
chr17:8159310|8159453 hsa-miR-6794-5p 0 1 0
chr17:8159310|8159453 hsa-miR-6883-5p 0 1 0
chr17:8159310|8159453 hsa-miR-4723-5p 0 1 0
chr17:8159310|8159453 hsa-miR-6855-5p 1 0 0
chr17:8159310|8159453 hsa-miR-10397-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:8159310|8159453
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MGAPSRGRLRDCTLKPLKLCHLKRQ
Nucleotide Sequence TTGGGGGCCCCCTCCCGTGGCAGGTTAAGGGACTGTACCCTCAAACCCTTAAAATTGTGCCATTTAAAAAGACAATAG

CircID chr17:8159310|8159453
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MRVQSLNLPREGAPKLSSPHTSGFLCGGGAGISKL
Nucleotide Sequence TTGAGGGTACAGTCCCTTAACCTGCCACGGGAGGGGGCCCCCAAACTTTCTTCCCCCCACACTTCTGGTTTTCTGTGTGGAGGGGGAGCAGGGATATCTAAGCTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites