CircRNA Information

General Information
circRNA Basic Information
CircID chr17:81823286|81823490
Strand +
CircType exon
Host Gene ENSG00000225663.6;
Algorism CIRI2;
Sequence CTGCGAGGCCAGGTGCCGGGTGGCGAGCGGGGCCTGGTGGAGGAGTATGTGGAGAAGGTCCCTAACCCCAGCCTGAAGAGTGAGTGGGGGCTGACCTGGGGGCAGGGCTGGGCCGGCAGGCCGGGCCTCATGGGCAGGAGGGGCCTGTGCCCACCACCTACCGCGTTGTCCCCTGGCAGCCTTCAAGCCCATCGACCTGAGTGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:81823286|81823490 hsa-miR-484 0 1 1
chr17:81823286|81823490 hsa-miR-510-5p 0 0 1
chr17:81823286|81823490 hsa-miR-510-3p 0 0 1
chr17:81823286|81823490 hsa-miR-668-5p 0 0 1
chr17:81823286|81823490 hsa-miR-668-3p 0 0 1
chr17:81823286|81823490 hsa-miR-541-5p 0 0 1
chr17:81823286|81823490 hsa-miR-541-3p 0 0 1
chr17:81823286|81823490 hsa-miR-1234-3p 0 0 1
chr17:81823286|81823490 hsa-miR-1234 0 0 1
chr17:81823286|81823490 hsa-miR-941 0 0 1
chr17:81823286|81823490 hsa-miR-654-5p 0 0 1
chr17:81823286|81823490 hsa-miR-361-3p 0 1 1
chr17:81823286|81823490 hsa-miR-324-3p 0 0 1
chr17:81823286|81823490 hsa-miR-515-5p 0 0 1
chr17:81823286|81823490 hsa-miR-608 1 0 0
chr17:81823286|81823490 hsa-miR-637 1 0 0
chr17:81823286|81823490 hsa-miR-762 1 0 0
chr17:81823286|81823490 hsa-miR-1303 1 0 0
chr17:81823286|81823490 hsa-miR-1538 0 1 0
chr17:81823286|81823490 hsa-miR-1913 0 1 0
chr17:81823286|81823490 hsa-miR-1976 0 1 0
chr17:81823286|81823490 hsa-miR-4268 0 1 0
chr17:81823286|81823490 hsa-miR-3943 1 1 0
chr17:81823286|81823490 hsa-miR-4505 0 1 0
chr17:81823286|81823490 hsa-miR-4721 1 1 0
chr17:81823286|81823490 hsa-miR-4767 1 0 0
chr17:81823286|81823490 hsa-miR-5787 0 1 0
chr17:81823286|81823490 hsa-miR-6126 0 1 0
chr17:81823286|81823490 hsa-miR-11399 0 1 0
chr17:81823286|81823490 hsa-miR-4747-3p 0 1 0
chr17:81823286|81823490 hsa-miR-7155-5p 0 1 0
chr17:81823286|81823490 hsa-miR-6879-3p 1 0 0
chr17:81823286|81823490 hsa-miR-4726-3p 1 1 0
chr17:81823286|81823490 hsa-miR-6836-3p 1 0 0
chr17:81823286|81823490 hsa-miR-138-1-3p 1 0 0
chr17:81823286|81823490 hsa-miR-6765-3p 1 0 0
chr17:81823286|81823490 hsa-miR-5008-5p 0 1 0
chr17:81823286|81823490 hsa-miR-5006-5p 0 1 0
chr17:81823286|81823490 hsa-miR-6735-3p 0 1 0
chr17:81823286|81823490 hsa-miR-6788-3p 0 1 0
chr17:81823286|81823490 hsa-miR-6786-5p 1 0 0
chr17:81823286|81823490 hsa-miR-4763-5p 1 1 0
chr17:81823286|81823490 hsa-miR-3667-3p 0 1 0
chr17:81823286|81823490 hsa-miR-659-5p 0 1 0
chr17:81823286|81823490 hsa-miR-6861-3p 1 0 0
chr17:81823286|81823490 hsa-miR-6809-3p 1 0 0
chr17:81823286|81823490 hsa-miR-4733-3p 0 1 0
chr17:81823286|81823490 hsa-miR-6789-5p 1 0 0
chr17:81823286|81823490 hsa-miR-6802-5p 0 1 0
chr17:81823286|81823490 hsa-miR-6769a-3p 0 1 0
chr17:81823286|81823490 hsa-miR-339-5p 0 1 0
chr17:81823286|81823490 hsa-miR-3191-3p 1 0 0
chr17:81823286|81823490 hsa-miR-6804-3p 0 1 0
chr17:81823286|81823490 hsa-miR-6752-3p 0 1 0
chr17:81823286|81823490 hsa-miR-6869-3p 1 0 0
chr17:81823286|81823490 hsa-miR-1296-5p 1 0 0
chr17:81823286|81823490 hsa-miR-4749-3p 0 1 0
chr17:81823286|81823490 hsa-miR-6880-3p 1 0 0
chr17:81823286|81823490 hsa-miR-6779-3p 0 1 0
chr17:81823286|81823490 hsa-miR-3680-5p 0 1 0
chr17:81823286|81823490 hsa-miR-4650-5p 0 1 0
chr17:81823286|81823490 hsa-miR-4763-3p 1 0 0
chr17:81823286|81823490 hsa-miR-3127-3p 1 0 0
chr17:81823286|81823490 hsa-miR-320a-5p 0 1 0
chr17:81823286|81823490 hsa-miR-4745-3p 1 1 0
chr17:81823286|81823490 hsa-miR-365b-5p 1 0 0
chr17:81823286|81823490 hsa-miR-3940-5p 1 0 0
chr17:81823286|81823490 hsa-miR-6799-3p 1 1 0
chr17:81823286|81823490 hsa-miR-6855-5p 0 1 0
chr17:81823286|81823490 hsa-miR-3184-5p 1 0 0
chr17:81823286|81823490 hsa-miR-6792-3p 1 1 0
chr17:81823286|81823490 hsa-miR-6805-3p 1 0 0
chr17:81823286|81823490 hsa-miR-10400-3p 1 0 0
chr17:81823286|81823490 hsa-miR-6775-3p 0 1 0
chr17:81823286|81823490 hsa-miR-10392-3p 1 1 0
chr17:81823286|81823490 hsa-miR-4691-5p 0 1 0
chr17:81823286|81823490 hsa-miR-1-5p 0 1 0
chr17:81823286|81823490 hsa-miR-412-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:81823286|81823490
ORF Type ORF1
Protein Length 67
Nucleotide Length 204
Protein Sequence LRGQVPGGERGLVEEYVEKVPNPSLKSEWGLTWGQGWAGRPGLMGRRGLCPPPTALSPGSLQAHRPE
Nucleotide Sequence CTGCGAGGCCAGGTGCCGGGTGGCGAGCGGGGCCTGGTGGAGGAGTATGTGGAGAAGGTCCCTAACCCCAGCCTGAAGAGTGAGTGGGGGCTGACCTGGGGGCAGGGCTGGGCCGGCAGGCCGGGCCTCATGGGCAGGAGGGGCCTGTGCCCACCACCTACCGCGTTGTCCCCTGGCAGCCTTCAAGCCCATCGACCTGAGTGA

CircID chr17:81823286|81823490
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MGAGLGRQAGPHGQEGPVPTTYRVVPWQPSSPST
Nucleotide Sequence CTGGGGGCAGGGCTGGGCCGGCAGGCCGGGCCTCATGGGCAGGAGGGGCCTGTGCCCACCACCTACCGCGTTGTCCCCTGGCAGCCTTCAAGCCCATCGACCTGA

CircID chr17:81823286|81823490
ORF Type ORF3
Protein Length 64
Nucleotide Length 192
Protein Sequence MGLKAARGQRGRWWAQAPPAHEARPAGPALPPGQPPLTLQAGVRDLLHILLHQAPLATRHLASQ
Nucleotide Sequence ATGGGCTTGAAGGCTGCCAGGGGACAACGCGGTAGGTGGTGGGCACAGGCCCCTCCTGCCCATGAGGCCCGGCCTGCCGGCCCAGCCCTGCCCCCAGGTCAGCCCCCACTCACTCTTCAGGCTGGGGTTAGGGACCTTCTCCACATACTCCTCCACCAGGCCCCGCTCGCCACCCGGCACCTGGCCTCGCAG

CircID chr17:81823286|81823490
ORF Type ORF4
Protein Length 59
Nucleotide Length 177
Protein Sequence MPGDNAVGGGHRPLLPMRPGLPAQPCPQVSPHSLFRLGLGTFSTYSSTRPRSPPGTWPR
Nucleotide Sequence CTGCCAGGGGACAACGCGGTAGGTGGTGGGCACAGGCCCCTCCTGCCCATGAGGCCCGGCCTGCCGGCCCAGCCCTGCCCCCAGGTCAGCCCCCACTCACTCTTCAGGCTGGGGTTAGGGACCTTCTCCACATACTCCTCCACCAGGCCCCGCTCGCCACCCGGCACCTGGCCTCGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites