CircRNA Information

General Information
circRNA Basic Information
CircID chr17:81843268|81843477
Strand -
CircType exon
Host Gene ENSG00000185624.13;
Algorism CIRI2;
Sequence CTCCCCACCCGGGAGTCAAGGGTCGTGGTTCTGCCTTGAACAGGCCACAGGCCGTGCTGTAGAGAGGCCAGTGGTCACAATGAGCCCACGACAGGAGGAGGAGCCCTGGCTTGAGGGAAGGGGAAGGCCCAGGCCTGTGCCGGGCCCCAGGGCTGGCAGCCACCAGCTCCTCTTCCAGGCATGGGGGACACCCTGACAGGATCCGGAAGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:81843268|81843477 hsa-miR-193b-5p 0 0 1
chr17:81843268|81843477 hsa-miR-193b-3p 0 0 1
chr17:81843268|81843477 hsa-miR-604 0 0 1
chr17:81843268|81843477 hsa-miR-647 0 0 1
chr17:81843268|81843477 hsa-miR-661 1 1 1
chr17:81843268|81843477 hsa-miR-758-5p 0 0 1
chr17:81843268|81843477 hsa-miR-758-3p 0 0 1
chr17:81843268|81843477 hsa-miR-708-5p 0 0 1
chr17:81843268|81843477 hsa-miR-708-3p 0 0 1
chr17:81843268|81843477 hsa-miR-939-5p 0 0 1
chr17:81843268|81843477 hsa-miR-939-3p 0 0 1
chr17:81843268|81843477 hsa-miR-1234-3p 0 0 1
chr17:81843268|81843477 hsa-miR-1202 0 0 1
chr17:81843268|81843477 hsa-miR-663b 0 0 1
chr17:81843268|81843477 hsa-miR-1234 0 0 1
chr17:81843268|81843477 hsa-miR-139-5p 0 0 1
chr17:81843268|81843477 hsa-miR-127-3p 1 1 1
chr17:81843268|81843477 hsa-miR-491-5p 0 0 1
chr17:81843268|81843477 hsa-miR-361-3p 0 0 1
chr17:81843268|81843477 hsa-miR-28-5p 0 0 1
chr17:81843268|81843477 hsa-miR-193a-3p 0 0 1
chr17:81843268|81843477 hsa-miR-642 0 0 1
chr17:81843268|81843477 hsa-miR-7 0 0 1
chr17:81843268|81843477 hsa-miR-138 0 0 1
chr17:81843268|81843477 hsa-miR-1254 0 0 1
chr17:81843268|81843477 hsa-miR-762 1 0 0
chr17:81843268|81843477 hsa-miR-940 1 0 0
chr17:81843268|81843477 hsa-miR-1538 1 0 0
chr17:81843268|81843477 hsa-miR-3183 0 1 0
chr17:81843268|81843477 hsa-miR-4268 0 1 0
chr17:81843268|81843477 hsa-miR-4292 0 1 0
chr17:81843268|81843477 hsa-miR-3714 0 1 0
chr17:81843268|81843477 hsa-miR-4440 1 1 0
chr17:81843268|81843477 hsa-miR-4456 0 1 0
chr17:81843268|81843477 hsa-miR-3972 0 1 0
chr17:81843268|81843477 hsa-miR-4674 1 0 0
chr17:81843268|81843477 hsa-miR-5100 1 0 0
chr17:81843268|81843477 hsa-miR-6069 1 0 0
chr17:81843268|81843477 hsa-miR-103a-2-5p 0 1 0
chr17:81843268|81843477 hsa-miR-4747-3p 1 1 0
chr17:81843268|81843477 hsa-miR-1227-5p 0 1 0
chr17:81843268|81843477 hsa-miR-7108-5p 0 1 0
chr17:81843268|81843477 hsa-miR-6868-3p 0 1 0
chr17:81843268|81843477 hsa-miR-6735-3p 1 1 0
chr17:81843268|81843477 hsa-miR-1343-3p 0 1 0
chr17:81843268|81843477 hsa-miR-6852-5p 0 1 0
chr17:81843268|81843477 hsa-miR-3677-3p 1 1 0
chr17:81843268|81843477 hsa-miR-6749-5p 1 0 0
chr17:81843268|81843477 hsa-miR-6742-3p 0 1 0
chr17:81843268|81843477 hsa-miR-6811-3p 0 1 0
chr17:81843268|81843477 hsa-miR-660-3p 0 1 0
chr17:81843268|81843477 hsa-miR-4664-3p 1 0 0
chr17:81843268|81843477 hsa-miR-4766-5p 0 1 0
chr17:81843268|81843477 hsa-miR-3177-3p 0 1 0
chr17:81843268|81843477 hsa-miR-6734-3p 0 1 0
chr17:81843268|81843477 hsa-miR-6808-3p 0 1 0
chr17:81843268|81843477 hsa-miR-6726-5p 0 1 0
chr17:81843268|81843477 hsa-miR-6788-5p 0 1 0
chr17:81843268|81843477 hsa-miR-3127-3p 0 1 0
chr17:81843268|81843477 hsa-miR-4745-3p 0 1 0
chr17:81843268|81843477 hsa-miR-6848-5p 1 0 0
chr17:81843268|81843477 hsa-miR-1910-3p 0 1 0
chr17:81843268|81843477 hsa-miR-6511a-5p 0 1 0
chr17:81843268|81843477 hsa-miR-7843-5p 0 1 0
chr17:81843268|81843477 hsa-miR-498-5p 0 1 0
chr17:81843268|81843477 hsa-miR-3116 0 1 0
chr17:81843268|81843477 hsa-miR-6724-5p 1 1 0
chr17:81843268|81843477 hsa-miR-2682-3p 0 1 0
chr17:81843268|81843477 hsa-miR-6791-5p 1 1 0
chr17:81843268|81843477 hsa-miR-4757-5p 0 1 0
chr17:81843268|81843477 hsa-miR-6756-3p 0 1 0
chr17:81843268|81843477 hsa-miR-6829-3p 1 0 0
chr17:81843268|81843477 hsa-miR-6769b-3p 0 1 0
chr17:81843268|81843477 hsa-miR-6744-3p 0 1 0
chr17:81843268|81843477 hsa-miR-6781-3p 0 1 0
chr17:81843268|81843477 hsa-miR-103a-1-5p 0 1 0
chr17:81843268|81843477 hsa-miR-412-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:81843268|81843477
ORF Type ORF1
Protein Length 38
Nucleotide Length 117
Protein Sequence MSPRQEEEPWLEGRGRPRPVPGPRAGSHQLLFQAWGTP
Nucleotide Sequence ATGAGCCCACGACAGGAGGAGGAGCCCTGGCTTGAGGGAAGGGGAAGGCCCAGGCCTGTGCCGGGCCCCAGGGCTGGCAGCCACCAGCTCCTCTTCCAGGCATGGGGGACACCCTGA

CircID chr17:81843268|81843477
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MREGEGPGLCRAPGLAATSSSSRHGGHPDRIRK
Nucleotide Sequence TTGAGGGAAGGGGAAGGCCCAGGCCTGTGCCGGGCCCCAGGGCTGGCAGCCACCAGCTCCTCTTCCAGGCATGGGGGACACCCTGACAGGATCCGGAAG

CircID chr17:81843268|81843477
ORF Type ORF3
Protein Length 47
Nucleotide Length 144
Protein Sequence MPALGPGTGLGLPLPSSQGSSSCRGLIVTTGLSTARPVACSRQNHDP
Nucleotide Sequence CTGCCAGCCCTGGGGCCCGGCACAGGCCTGGGCCTTCCCCTTCCCTCAAGCCAGGGCTCCTCCTCCTGTCGTGGGCTCATTGTGACCACTGGCCTCTCTACAGCACGGCCTGTGGCCTGTTCAAGGCAGAACCACGACCCTTGA

CircID chr17:81843268|81843477
ORF Type ORF4
Protein Length 35
Nucleotide Length 108
Protein Sequence MPGRGAGGCQPWGPAQAWAFPFPQARAPPPVVGSL
Nucleotide Sequence ATGCCTGGAAGAGGAGCTGGTGGCTGCCAGCCCTGGGGCCCGGCACAGGCCTGGGCCTTCCCCTTCCCTCAAGCCAGGGCTCCTCCTCCTGTCGTGGGCTCATTGTGA

CircID chr17:81843268|81843477
ORF Type ORF5
Protein Length 66
Nucleotide Length 198
Protein Sequence MSGCPPCLEEELVAASPGARHRPGPSPSLKPGLLLLSWAHCDHWPLYSTACGLFKAEPRPLTPGWG
Nucleotide Sequence CTGTCAGGGTGTCCCCCATGCCTGGAAGAGGAGCTGGTGGCTGCCAGCCCTGGGGCCCGGCACAGGCCTGGGCCTTCCCCTTCCCTCAAGCCAGGGCTCCTCCTCCTGTCGTGGGCTCATTGTGACCACTGGCCTCTCTACAGCACGGCCTGTGGCCTGTTCAAGGCAGAACCACGACCCTTGACTCCCGGGTGGGGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites