CircRNA Information

General Information
circRNA Basic Information
CircID chr17:81867729|81867902
Strand +
CircType exon
Host Gene ENSG00000262413.1;
Algorism CIRI2;
Sequence CCCCGGCAGGCCTTCCCTGACCCAGCCAGGAACAAACAAGGGACCAAGTGCACACATTGCTGAGAGCCGTCTCCTGTGCCTCCCCCGCCCCATCCCCGGTCTTCGTGTTGTGTCTGCCAGGCTCAGGCAGAGGCGCCTGTCCCTGCTTCTTTTCTGACCGGGAAATAAATGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:81867729|81867902 hsa-miR-375-5p 0 0 1
chr17:81867729|81867902 hsa-miR-375-3p 0 0 1
chr17:81867729|81867902 hsa-miR-133b 0 0 1
chr17:81867729|81867902 hsa-miR-545-5p 0 0 1
chr17:81867729|81867902 hsa-miR-545-3p 0 0 1
chr17:81867729|81867902 hsa-miR-623 1 0 1
chr17:81867729|81867902 hsa-miR-650 1 0 1
chr17:81867729|81867902 hsa-miR-542-5p 0 0 1
chr17:81867729|81867902 hsa-miR-566 0 0 1
chr17:81867729|81867902 hsa-miR-1201 0 0 1
chr17:81867729|81867902 hsa-miR-663 0 0 1
chr17:81867729|81867902 hsa-miR-133a 0 0 1
chr17:81867729|81867902 hsa-miR-608 1 0 0
chr17:81867729|81867902 hsa-miR-661 1 0 0
chr17:81867729|81867902 hsa-miR-663a 1 1 0
chr17:81867729|81867902 hsa-miR-762 1 1 0
chr17:81867729|81867902 hsa-miR-1268a 1 0 0
chr17:81867729|81867902 hsa-miR-2861 1 0 0
chr17:81867729|81867902 hsa-miR-3131 1 1 0
chr17:81867729|81867902 hsa-miR-3141 1 0 0
chr17:81867729|81867902 hsa-miR-1193 1 0 0
chr17:81867729|81867902 hsa-miR-3196 1 1 0
chr17:81867729|81867902 hsa-miR-3197 1 0 0
chr17:81867729|81867902 hsa-miR-4259 1 0 0
chr17:81867729|81867902 hsa-miR-4325 0 1 0
chr17:81867729|81867902 hsa-miR-4281 1 0 0
chr17:81867729|81867902 hsa-miR-3612 0 1 0
chr17:81867729|81867902 hsa-miR-3936 1 0 0
chr17:81867729|81867902 hsa-miR-3937 1 0 0
chr17:81867729|81867902 hsa-miR-1268b 1 0 0
chr17:81867729|81867902 hsa-miR-4463 1 1 0
chr17:81867729|81867902 hsa-miR-4466 1 0 0
chr17:81867729|81867902 hsa-miR-4488 1 0 0
chr17:81867729|81867902 hsa-miR-4505 1 1 0
chr17:81867729|81867902 hsa-miR-2392 1 0 0
chr17:81867729|81867902 hsa-miR-4507 1 0 0
chr17:81867729|81867902 hsa-miR-1587 1 0 0
chr17:81867729|81867902 hsa-miR-4651 1 0 0
chr17:81867729|81867902 hsa-miR-4706 1 0 0
chr17:81867729|81867902 hsa-miR-5572 1 0 0
chr17:81867729|81867902 hsa-miR-5698 1 1 0
chr17:81867729|81867902 hsa-miR-5787 1 1 0
chr17:81867729|81867902 hsa-miR-6088 1 0 0
chr17:81867729|81867902 hsa-miR-8072 1 0 0
chr17:81867729|81867902 hsa-miR-8073 1 1 0
chr17:81867729|81867902 hsa-miR-8089 1 0 0
chr17:81867729|81867902 hsa-miR-12128 0 1 0
chr17:81867729|81867902 hsa-miR-211-3p 0 1 0
chr17:81867729|81867902 hsa-miR-512-5p 0 1 0
chr17:81867729|81867902 hsa-miR-6747-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6765-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6861-5p 1 0 0
chr17:81867729|81867902 hsa-miR-7106-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6825-5p 1 1 0
chr17:81867729|81867902 hsa-miR-6857-5p 1 0 0
chr17:81867729|81867902 hsa-miR-187-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6799-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6728-5p 1 0 0
chr17:81867729|81867902 hsa-miR-3622a-5p 1 0 0
chr17:81867729|81867902 hsa-miR-1227-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6089 0 1 0
chr17:81867729|81867902 hsa-miR-6757-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6880-5p 1 0 0
chr17:81867729|81867902 hsa-miR-7847-3p 1 0 0
chr17:81867729|81867902 hsa-miR-4695-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6890-5p 1 0 0
chr17:81867729|81867902 hsa-miR-3622b-5p 1 0 0
chr17:81867729|81867902 hsa-miR-4655-5p 1 1 0
chr17:81867729|81867902 hsa-miR-7845-5p 0 1 0
chr17:81867729|81867902 hsa-miR-6716-5p 1 0 0
chr17:81867729|81867902 hsa-miR-3151-5p 1 0 0
chr17:81867729|81867902 hsa-miR-659-3p 1 0 0
chr17:81867729|81867902 hsa-miR-3180-3p 1 1 0
chr17:81867729|81867902 hsa-miR-4697-3p 1 0 0
chr17:81867729|81867902 hsa-miR-6732-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6805-5p 1 0 0
chr17:81867729|81867902 hsa-miR-2467-3p 1 0 0
chr17:81867729|81867902 hsa-miR-6782-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6514-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6786-5p 1 0 0
chr17:81867729|81867902 hsa-miR-4783-3p 1 0 0
chr17:81867729|81867902 hsa-miR-6784-5p 1 0 0
chr17:81867729|81867902 hsa-miR-4640-5p 1 0 0
chr17:81867729|81867902 hsa-miR-1908-5p 1 1 0
chr17:81867729|81867902 hsa-miR-1228-5p 1 0 0
chr17:81867729|81867902 hsa-miR-92b-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6749-5p 1 0 0
chr17:81867729|81867902 hsa-miR-4787-5p 1 1 0
chr17:81867729|81867902 hsa-miR-149-3p 1 0 0
chr17:81867729|81867902 hsa-miR-937-5p 1 0 0
chr17:81867729|81867902 hsa-miR-744-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6801-5p 1 1 0
chr17:81867729|81867902 hsa-miR-4750-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6868-5p 0 1 0
chr17:81867729|81867902 hsa-miR-6767-5p 1 0 0
chr17:81867729|81867902 hsa-miR-668-5p 0 1 0
chr17:81867729|81867902 hsa-miR-221-5p 0 1 0
chr17:81867729|81867902 hsa-miR-4797-3p 0 1 0
chr17:81867729|81867902 hsa-miR-10400-5p 1 0 0
chr17:81867729|81867902 hsa-miR-1207-5p 1 0 0
chr17:81867729|81867902 hsa-miR-1233-5p 1 0 0
chr17:81867729|81867902 hsa-miR-4763-3p 1 0 0
chr17:81867729|81867902 hsa-miR-6769b-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6778-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6787-5p 1 1 0
chr17:81867729|81867902 hsa-miR-6812-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6816-5p 1 1 0
chr17:81867729|81867902 hsa-miR-6870-5p 0 1 0
chr17:81867729|81867902 hsa-miR-3180 1 0 0
chr17:81867729|81867902 hsa-miR-6737-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6743-5p 1 1 0
chr17:81867729|81867902 hsa-miR-6752-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6756-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6803-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6819-5p 1 1 0
chr17:81867729|81867902 hsa-miR-6842-5p 1 0 0
chr17:81867729|81867902 hsa-miR-7110-5p 1 0 0
chr17:81867729|81867902 hsa-miR-10401-5p 1 0 0
chr17:81867729|81867902 hsa-miR-7111-5p 1 1 0
chr17:81867729|81867902 hsa-miR-3620-5p 1 0 0
chr17:81867729|81867902 hsa-miR-4728-5p 1 0 0
chr17:81867729|81867902 hsa-miR-5196-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6780b-5p 1 1 0
chr17:81867729|81867902 hsa-miR-10396b-5p 1 0 0
chr17:81867729|81867902 hsa-miR-1237-5p 1 0 0
chr17:81867729|81867902 hsa-miR-328-5p 1 1 0
chr17:81867729|81867902 hsa-miR-4649-5p 1 0 0
chr17:81867729|81867902 hsa-miR-4725-3p 1 0 0
chr17:81867729|81867902 hsa-miR-4745-5p 1 0 0
chr17:81867729|81867902 hsa-miR-4749-5p 1 1 0
chr17:81867729|81867902 hsa-miR-6729-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6777-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6795-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6887-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6889-5p 1 0 0
chr17:81867729|81867902 hsa-miR-4723-5p 1 1 0
chr17:81867729|81867902 hsa-miR-6885-5p 1 0 0
chr17:81867729|81867902 hsa-miR-939-5p 1 0 0
chr17:81867729|81867902 hsa-miR-3940-5p 1 0 0
chr17:81867729|81867902 hsa-miR-1199-5p 0 1 0
chr17:81867729|81867902 hsa-miR-4665-5p 1 0 0
chr17:81867729|81867902 hsa-miR-4700-5p 1 0 0
chr17:81867729|81867902 hsa-miR-6785-5p 1 0 0
chr17:81867729|81867902 hsa-miR-4667-5p 1 0 0
chr17:81867729|81867902 hsa-miR-4756-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:81867729|81867902
ORF Type ORF1
Protein Length 46
Nucleotide Length 141
Protein Sequence MTQPGTNKGPSAHIAESRLLCLPRPIPGLRVVSARLRQRRLSLLLF
Nucleotide Sequence CTGACCCAGCCAGGAACAAACAAGGGACCAAGTGCACACATTGCTGAGAGCCGTCTCCTGTGCCTCCCCCGCCCCATCCCCGGTCTTCGTGTTGTGTCTGCCAGGCTCAGGCAGAGGCGCCTGTCCCTGCTTCTTTTCTGA
CircID chr17:81867729|81867902
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MLRAVSCASPAPSPVFVLCLPGSGRGACPCFFSDREINA
Nucleotide Sequence TTGCTGAGAGCCGTCTCCTGTGCCTCCCCCGCCCCATCCCCGGTCTTCGTGTTGTGTCTGCCAGGCTCAGGCAGAGGCGCCTGTCCCTGCTTCTTTTCTGACCGGGAAATAAATGCC
CircID chr17:81867729|81867902
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MSLADTTRRPGMGRGRHRRRLSAMCALGPLFVPGWVREGLPG
Nucleotide Sequence CTGAGCCTGGCAGACACAACACGAAGACCGGGGATGGGGCGGGGGAGGCACAGGAGACGGCTCTCAGCAATGTGTGCACTTGGTCCCTTGTTTGTTCCTGGCTGGGTCAGGGAAGGCCTGCCGGGG
CircID chr17:81867729|81867902
ORF Type ORF4
Protein Length 43
Nucleotide Length 129
Protein Sequence MPEPGRHNTKTGDGAGEAQETALSNVCTWSLVCSWLGQGRPAG
Nucleotide Sequence CTGCCTGAGCCTGGCAGACACAACACGAAGACCGGGGATGGGGCGGGGGAGGCACAGGAGACGGCTCTCAGCAATGTGTGCACTTGGTCCCTTGTTTGTTCCTGGCTGGGTCAGGGAAGGCCTGCCGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab