CircRNA Information

General Information
circRNA Basic Information
CircID chr17:81867805|81867998
Strand -
CircType exon
Host Gene ENSG00000262413.1;
Algorism CIRI2;
Sequence CGGGGATGGGGCGGGGGAGGCACAGGAGACGGCTCTCAGCAATGTGTGCACTTGGTCCCTTGTTTGTTCCTGGCTGGGTCAGGGAAGGCCTGCCGGGGGTGGTGGCACTGAGAGCCTGGGGGAACAGGCGCCAGGCCAGTGGCCCAGGGACGGCACGGACGGAGGCAATAAATACTGATGGCCAGGCGGGGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:81867805|81867998 hsa-miR-148a-5p 0 0 1
chr17:81867805|81867998 hsa-miR-148a-3p 0 0 1
chr17:81867805|81867998 hsa-miR-137-5p 0 0 1
chr17:81867805|81867998 hsa-miR-137-3p 0 0 1
chr17:81867805|81867998 hsa-miR-152-5p 0 0 1
chr17:81867805|81867998 hsa-miR-152-3p 0 0 1
chr17:81867805|81867998 hsa-miR-148b-5p 0 0 1
chr17:81867805|81867998 hsa-miR-148b-3p 0 0 1
chr17:81867805|81867998 hsa-miR-484 0 1 1
chr17:81867805|81867998 hsa-miR-495-5p 0 0 1
chr17:81867805|81867998 hsa-miR-495-3p 0 0 1
chr17:81867805|81867998 hsa-miR-193b-5p 0 0 1
chr17:81867805|81867998 hsa-miR-193b-3p 0 0 1
chr17:81867805|81867998 hsa-miR-873-5p 0 0 1
chr17:81867805|81867998 hsa-miR-873-3p 0 0 1
chr17:81867805|81867998 hsa-miR-1227-5p 0 0 1
chr17:81867805|81867998 hsa-miR-1227-3p 0 0 1
chr17:81867805|81867998 hsa-miR-1225-3p 0 0 1
chr17:81867805|81867998 hsa-miR-566 0 0 1
chr17:81867805|81867998 hsa-miR-361-3p 0 0 1
chr17:81867805|81867998 hsa-miR-628-5p 0 0 1
chr17:81867805|81867998 hsa-miR-125a-5p 0 0 1
chr17:81867805|81867998 hsa-miR-519b-3p 0 0 1
chr17:81867805|81867998 hsa-miR-519c-3p 0 0 1
chr17:81867805|81867998 hsa-miR-193a-3p 0 0 1
chr17:81867805|81867998 hsa-miR-220b 0 0 1
chr17:81867805|81867998 hsa-miR-1274a 0 0 1
chr17:81867805|81867998 hsa-miR-125b 0 0 1
chr17:81867805|81867998 hsa-miR-550 0 0 1
chr17:81867805|81867998 hsa-miR-519a 0 0 1
chr17:81867805|81867998 hsa-miR-661 1 1 0
chr17:81867805|81867998 hsa-miR-3142 0 1 0
chr17:81867805|81867998 hsa-miR-3155a 0 1 0
chr17:81867805|81867998 hsa-miR-3176 0 1 0
chr17:81867805|81867998 hsa-miR-4292 0 1 0
chr17:81867805|81867998 hsa-miR-4475 0 1 0
chr17:81867805|81867998 hsa-miR-3155b 0 1 0
chr17:81867805|81867998 hsa-miR-5193 0 1 0
chr17:81867805|81867998 hsa-miR-9899 1 0 0
chr17:81867805|81867998 hsa-miR-211-3p 0 1 0
chr17:81867805|81867998 hsa-miR-6836-3p 1 1 0
chr17:81867805|81867998 hsa-miR-7160-5p 1 0 0
chr17:81867805|81867998 hsa-miR-3189-5p 1 0 0
chr17:81867805|81867998 hsa-miR-942-5p 0 1 0
chr17:81867805|81867998 hsa-miR-6882-3p 1 0 0
chr17:81867805|81867998 hsa-miR-939-3p 0 1 0
chr17:81867805|81867998 hsa-miR-7108-3p 0 1 0
chr17:81867805|81867998 hsa-miR-1247-5p 0 1 0
chr17:81867805|81867998 hsa-miR-1909-5p 1 0 0
chr17:81867805|81867998 hsa-miR-4715-3p 0 1 0
chr17:81867805|81867998 hsa-miR-6514-3p 0 1 0
chr17:81867805|81867998 hsa-miR-1266-3p 0 1 0
chr17:81867805|81867998 hsa-miR-339-5p 1 0 0
chr17:81867805|81867998 hsa-miR-3190-5p 1 0 0
chr17:81867805|81867998 hsa-miR-4776-3p 1 0 0
chr17:81867805|81867998 hsa-miR-6889-3p 0 1 0
chr17:81867805|81867998 hsa-miR-4732-3p 0 1 0
chr17:81867805|81867998 hsa-miR-371a-3p 0 1 0
chr17:81867805|81867998 hsa-miR-4529-5p 1 1 0
chr17:81867805|81867998 hsa-miR-1914-5p 0 1 0
chr17:81867805|81867998 hsa-miR-4750-3p 0 1 0
chr17:81867805|81867998 hsa-miR-3173-5p 1 0 0
chr17:81867805|81867998 hsa-miR-6734-3p 0 1 0
chr17:81867805|81867998 hsa-miR-4485-5p 0 1 0
chr17:81867805|81867998 hsa-miR-3152-5p 0 1 0
chr17:81867805|81867998 hsa-miR-4650-5p 0 1 0
chr17:81867805|81867998 hsa-miR-10396a-3p 1 0 0
chr17:81867805|81867998 hsa-miR-10396b-3p 1 0 0
chr17:81867805|81867998 hsa-miR-6799-3p 1 0 0
chr17:81867805|81867998 hsa-miR-6791-5p 0 1 0
chr17:81867805|81867998 hsa-miR-10401-3p 1 0 0
chr17:81867805|81867998 hsa-miR-6829-3p 1 0 0
chr17:81867805|81867998 hsa-miR-6529-3p 0 1 0
chr17:81867805|81867998 hsa-miR-6819-3p 1 0 0
chr17:81867805|81867998 hsa-miR-6823-3p 0 1 0
chr17:81867805|81867998 hsa-miR-4691-5p 0 1 0
chr17:81867805|81867998 hsa-miR-33b-3p 1 0 0
chr17:81867805|81867998 hsa-miR-4800-3p 1 1 0
chr17:81867805|81867998 hsa-miR-6827-3p 0 1 0
chr17:81867805|81867998 hsa-miR-6737-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:81867805|81867998
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MGQGRPAGGGGTESLGEQAPGQWPRDGTDGGNKY
Nucleotide Sequence CTGGGTCAGGGAAGGCCTGCCGGGGGTGGTGGCACTGAGAGCCTGGGGGAACAGGCGCCAGGCCAGTGGCCCAGGGACGGCACGGACGGAGGCAATAAATACTGA
CircID chr17:81867805|81867998
ORF Type ORF2
Protein Length 63
Nucleotide Length 189
Protein Sequence MGRGRHRRRLSAMCALGPLFVPGWVREGLPGVVALRAWGNRRQASGPGTARTEAINTDGQAGL
Nucleotide Sequence ATGGGGCGGGGGAGGCACAGGAGACGGCTCTCAGCAATGTGTGCACTTGGTCCCTTGTTTGTTCCTGGCTGGGTCAGGGAAGGCCTGCCGGGGGTGGTGGCACTGAGAGCCTGGGGGAACAGGCGCCAGGCCAGTGGCCCAGGGACGGCACGGACGGAGGCAATAAATACTGATGGCCAGGCGGGGCTC
CircID chr17:81867805|81867998
ORF Type ORF3
Protein Length 49
Nucleotide Length 150
Protein Sequence MAISIYCLRPCRPWATGLAPVPPGSQCHHPRQAFPDPARNKQGTKCTHC
Nucleotide Sequence CTGGCCATCAGTATTTATTGCCTCCGTCCGTGCCGTCCCTGGGCCACTGGCCTGGCGCCTGTTCCCCCAGGCTCTCAGTGCCACCACCCCCGGCAGGCCTTCCCTGACCCAGCCAGGAACAAACAAGGGACCAAGTGCACACATTGCTGA
CircID chr17:81867805|81867998
ORF Type ORF4
Protein Length 46
Nucleotide Length 138
Protein Sequence MAWRLFPQALSATTPGRPSLTQPGTNKGPSAHIAESRLLCLPRPIP
Nucleotide Sequence CTGGCCTGGCGCCTGTTCCCCCAGGCTCTCAGTGCCACCACCCCCGGCAGGCCTTCCCTGACCCAGCCAGGAACAAACAAGGGACCAAGTGCACACATTGCTGAGAGCCGTCTCCTGTGCCTCCCCCGCCCCATCCCC
CircID chr17:81867805|81867998
ORF Type ORF5
Protein Length 29
Nucleotide Length 90
Protein Sequence MPPSVPSLGHWPGACSPRLSVPPPPAGLP
Nucleotide Sequence TTGCCTCCGTCCGTGCCGTCCCTGGGCCACTGGCCTGGCGCCTGTTCCCCCAGGCTCTCAGTGCCACCACCCCCGGCAGGCCTTCCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab