CircRNA Information

General Information
circRNA Basic Information
CircID chr17:81868989|81869383
Strand -
CircType exon
Host Gene ENSG00000141522.10;
Algorism CIRI2;
Sequence CCTTGGGTGCCTCCTCCACGGGGGTCAGGAACTCGTACTCCTCGGCCCGGGGCCCATAGCTGCCTACCATGTAGTCAGTCTTGTCAACTGCGGCACAAGGAAGAGGGCGGTCAGCGGCCCCGCTTCCCCGCCTGGCAGCACGCACCCAAGCGGCCCCCTCTGCCCTGCCCGGGGCCCCACTCACTCTTGACGCCTTTCCTGTACGTATGCTGGATGTACTTCATGCCGGACACTATCTCTCGGTTAACCTGCAGGACCCGAAGCGAGGATCAGGGAAGGTCGGTCCGGACCCCAGCCCCAGCCCCGCCTCCATTCCCTGGCCACAGCAGCCTGTAGCTTACCCGGAAAGAGATTTTTATCCGGTACTCCACACCCTCCTTCAGCACAAACGACTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:81868989|81869383 hsa-miR-335-5p 0 0 1
chr17:81868989|81869383 hsa-miR-335-3p 0 0 1
chr17:81868989|81869383 hsa-miR-555 0 1 1
chr17:81868989|81869383 hsa-miR-650 0 0 1
chr17:81868989|81869383 hsa-miR-657 0 0 1
chr17:81868989|81869383 hsa-miR-765 0 0 1
chr17:81868989|81869383 hsa-miR-744-5p 0 0 1
chr17:81868989|81869383 hsa-miR-744-3p 0 0 1
chr17:81868989|81869383 hsa-miR-216b-5p 0 0 1
chr17:81868989|81869383 hsa-miR-216b-3p 0 0 1
chr17:81868989|81869383 hsa-miR-940 0 0 1
chr17:81868989|81869383 hsa-miR-1180-5p 0 0 1
chr17:81868989|81869383 hsa-miR-1180-3p 0 0 1
chr17:81868989|81869383 hsa-miR-1236-5p 0 0 1
chr17:81868989|81869383 hsa-miR-1236-3p 0 0 1
chr17:81868989|81869383 hsa-miR-1200 0 0 1
chr17:81868989|81869383 hsa-miR-663b 0 0 1
chr17:81868989|81869383 hsa-miR-1205 0 0 1
chr17:81868989|81869383 hsa-miR-1262 0 0 1
chr17:81868989|81869383 hsa-miR-1282 0 0 1
chr17:81868989|81869383 hsa-miR-1252-5p 0 0 1
chr17:81868989|81869383 hsa-miR-1252-3p 0 0 1
chr17:81868989|81869383 hsa-miR-296-5p 0 0 1
chr17:81868989|81869383 hsa-miR-615-5p 1 1 1
chr17:81868989|81869383 hsa-miR-502-5p 0 0 1
chr17:81868989|81869383 hsa-miR-338-3p 0 0 1
chr17:81868989|81869383 hsa-miR-1207-5p 1 1 1
chr17:81868989|81869383 hsa-miR-125a-5p 0 0 1
chr17:81868989|81869383 hsa-miR-548c-3p 0 0 1
chr17:81868989|81869383 hsa-miR-151-5p 0 0 1
chr17:81868989|81869383 hsa-miR-1274a 0 0 1
chr17:81868989|81869383 hsa-miR-125b 0 0 1
chr17:81868989|81869383 hsa-miR-218 0 0 1
chr17:81868989|81869383 hsa-miR-663 0 0 1
chr17:81868989|81869383 hsa-miR-638 1 0 0
chr17:81868989|81869383 hsa-miR-663a 1 1 0
chr17:81868989|81869383 hsa-miR-658 1 0 0
chr17:81868989|81869383 hsa-miR-762 1 1 0
chr17:81868989|81869383 hsa-miR-1183 1 0 0
chr17:81868989|81869383 hsa-miR-1268a 1 0 0
chr17:81868989|81869383 hsa-miR-2110 0 1 0
chr17:81868989|81869383 hsa-miR-2861 1 0 0
chr17:81868989|81869383 hsa-miR-548v 0 1 0
chr17:81868989|81869383 hsa-miR-3181 1 0 0
chr17:81868989|81869383 hsa-miR-3196 1 0 0
chr17:81868989|81869383 hsa-miR-4281 1 1 0
chr17:81868989|81869383 hsa-miR-3911 1 1 0
chr17:81868989|81869383 hsa-miR-3937 1 1 0
chr17:81868989|81869383 hsa-miR-1268b 1 0 0
chr17:81868989|81869383 hsa-miR-4443 0 1 0
chr17:81868989|81869383 hsa-miR-4449 1 0 0
chr17:81868989|81869383 hsa-miR-4466 1 0 0
chr17:81868989|81869383 hsa-miR-4488 1 0 0
chr17:81868989|81869383 hsa-miR-4505 1 1 0
chr17:81868989|81869383 hsa-miR-4507 1 0 0
chr17:81868989|81869383 hsa-miR-4508 1 1 0
chr17:81868989|81869383 hsa-miR-4513 1 1 0
chr17:81868989|81869383 hsa-miR-4533 1 0 0
chr17:81868989|81869383 hsa-miR-1587 1 0 0
chr17:81868989|81869383 hsa-miR-4651 1 0 0
chr17:81868989|81869383 hsa-miR-4656 1 1 0
chr17:81868989|81869383 hsa-miR-4669 1 1 0
chr17:81868989|81869383 hsa-miR-4706 1 1 0
chr17:81868989|81869383 hsa-miR-4741 1 0 0
chr17:81868989|81869383 hsa-miR-5090 1 0 0
chr17:81868989|81869383 hsa-miR-5194 1 0 0
chr17:81868989|81869383 hsa-miR-5787 1 1 0
chr17:81868989|81869383 hsa-miR-6085 1 0 0
chr17:81868989|81869383 hsa-miR-6127 1 0 0
chr17:81868989|81869383 hsa-miR-6132 1 1 0
chr17:81868989|81869383 hsa-miR-6133 1 0 0
chr17:81868989|81869383 hsa-miR-6860 1 1 0
chr17:81868989|81869383 hsa-miR-8089 1 0 0
chr17:81868989|81869383 hsa-miR-12118 0 1 0
chr17:81868989|81869383 hsa-miR-128-1-5p 0 1 0
chr17:81868989|81869383 hsa-miR-4700-3p 0 1 0
chr17:81868989|81869383 hsa-miR-7155-5p 1 1 0
chr17:81868989|81869383 hsa-miR-6747-5p 1 0 0
chr17:81868989|81869383 hsa-miR-4433a-3p 1 0 0
chr17:81868989|81869383 hsa-miR-6765-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6861-5p 1 0 0
chr17:81868989|81869383 hsa-miR-7106-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6799-5p 1 0 0
chr17:81868989|81869383 hsa-miR-1227-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6515-5p 1 1 0
chr17:81868989|81869383 hsa-miR-6089 1 1 0
chr17:81868989|81869383 hsa-miR-4722-5p 1 0 0
chr17:81868989|81869383 hsa-miR-4755-3p 0 1 0
chr17:81868989|81869383 hsa-miR-7160-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6741-5p 1 1 0
chr17:81868989|81869383 hsa-miR-6727-5p 1 1 0
chr17:81868989|81869383 hsa-miR-6806-5p 0 1 0
chr17:81868989|81869383 hsa-miR-6721-5p 1 0 0
chr17:81868989|81869383 hsa-miR-197-5p 1 1 0
chr17:81868989|81869383 hsa-miR-874-3p 1 0 0
chr17:81868989|81869383 hsa-miR-7108-5p 1 1 0
chr17:81868989|81869383 hsa-miR-6716-5p 1 1 0
chr17:81868989|81869383 hsa-miR-3151-5p 1 1 0
chr17:81868989|81869383 hsa-miR-1292-5p 1 0 0
chr17:81868989|81869383 hsa-miR-3180-3p 1 0 0
chr17:81868989|81869383 hsa-miR-6772-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6793-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6796-5p 1 0 0
chr17:81868989|81869383 hsa-miR-185-3p 1 1 0
chr17:81868989|81869383 hsa-miR-6829-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6732-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6805-5p 1 1 0
chr17:81868989|81869383 hsa-miR-6798-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6821-5p 1 0 0
chr17:81868989|81869383 hsa-miR-5006-5p 1 1 0
chr17:81868989|81869383 hsa-miR-6786-5p 1 0 0
chr17:81868989|81869383 hsa-miR-3944-3p 1 0 0
chr17:81868989|81869383 hsa-miR-1229-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6784-5p 1 0 0
chr17:81868989|81869383 hsa-miR-4640-5p 1 0 0
chr17:81868989|81869383 hsa-miR-1908-5p 1 1 0
chr17:81868989|81869383 hsa-miR-296-3p 1 0 0
chr17:81868989|81869383 hsa-miR-6823-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6749-5p 1 1 0
chr17:81868989|81869383 hsa-miR-659-5p 0 1 0
chr17:81868989|81869383 hsa-miR-6501-5p 1 0 0
chr17:81868989|81869383 hsa-miR-4787-5p 1 0 0
chr17:81868989|81869383 hsa-miR-378a-5p 0 1 0
chr17:81868989|81869383 hsa-miR-193a-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6877-5p 1 1 0
chr17:81868989|81869383 hsa-miR-6825-3p 0 1 0
chr17:81868989|81869383 hsa-miR-7112-5p 1 1 0
chr17:81868989|81869383 hsa-miR-1225-5p 1 0 0
chr17:81868989|81869383 hsa-miR-4707-5p 1 0 0
chr17:81868989|81869383 hsa-miR-4778-3p 0 1 0
chr17:81868989|81869383 hsa-miR-4746-3p 1 0 0
chr17:81868989|81869383 hsa-miR-1296-3p 1 1 0
chr17:81868989|81869383 hsa-miR-6734-3p 0 1 0
chr17:81868989|81869383 hsa-miR-5587-3p 0 1 0
chr17:81868989|81869383 hsa-miR-29c-5p 0 1 0
chr17:81868989|81869383 hsa-miR-10400-5p 1 0 0
chr17:81868989|81869383 hsa-miR-4763-3p 1 1 0
chr17:81868989|81869383 hsa-miR-6787-5p 1 1 0
chr17:81868989|81869383 hsa-miR-6816-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6870-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6775-5p 1 0 0
chr17:81868989|81869383 hsa-miR-3180 1 0 0
chr17:81868989|81869383 hsa-miR-5001-5p 0 1 0
chr17:81868989|81869383 hsa-miR-6743-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6752-5p 1 1 0
chr17:81868989|81869383 hsa-miR-6756-5p 1 1 0
chr17:81868989|81869383 hsa-miR-6803-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6813-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6842-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6851-5p 1 0 0
chr17:81868989|81869383 hsa-miR-7110-5p 1 0 0
chr17:81868989|81869383 hsa-miR-11181-3p 0 1 0
chr17:81868989|81869383 hsa-miR-6722-3p 1 0 0
chr17:81868989|81869383 hsa-miR-6751-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6779-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6797-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6808-5p 1 1 0
chr17:81868989|81869383 hsa-miR-6879-5p 1 1 0
chr17:81868989|81869383 hsa-miR-3620-5p 1 1 0
chr17:81868989|81869383 hsa-miR-5196-5p 1 1 0
chr17:81868989|81869383 hsa-miR-10396a-5p 1 1 0
chr17:81868989|81869383 hsa-miR-10396b-5p 1 1 0
chr17:81868989|81869383 hsa-miR-10526-3p 1 0 0
chr17:81868989|81869383 hsa-miR-1237-5p 1 1 0
chr17:81868989|81869383 hsa-miR-1909-3p 1 0 0
chr17:81868989|81869383 hsa-miR-328-5p 1 0 0
chr17:81868989|81869383 hsa-miR-4632-5p 1 1 0
chr17:81868989|81869383 hsa-miR-4685-5p 1 1 0
chr17:81868989|81869383 hsa-miR-4725-3p 0 1 0
chr17:81868989|81869383 hsa-miR-4745-5p 1 1 0
chr17:81868989|81869383 hsa-miR-4749-5p 1 1 0
chr17:81868989|81869383 hsa-miR-6735-5p 0 1 0
chr17:81868989|81869383 hsa-miR-6846-5p 1 1 0
chr17:81868989|81869383 hsa-miR-6848-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6883-5p 1 1 0
chr17:81868989|81869383 hsa-miR-6889-5p 0 1 0
chr17:81868989|81869383 hsa-miR-939-5p 1 0 0
chr17:81868989|81869383 hsa-miR-1238-5p 1 1 0
chr17:81868989|81869383 hsa-miR-4758-5p 1 1 0
chr17:81868989|81869383 hsa-miR-6511b-5p 1 1 0
chr17:81868989|81869383 hsa-miR-10396a-3p 1 1 0
chr17:81868989|81869383 hsa-miR-10396b-3p 1 1 0
chr17:81868989|81869383 hsa-miR-3940-5p 1 0 0
chr17:81868989|81869383 hsa-miR-7843-5p 0 1 0
chr17:81868989|81869383 hsa-miR-1914-3p 1 0 0
chr17:81868989|81869383 hsa-miR-6855-5p 1 1 0
chr17:81868989|81869383 hsa-miR-7151-3p 0 1 0
chr17:81868989|81869383 hsa-miR-6891-5p 0 1 0
chr17:81868989|81869383 hsa-miR-6785-5p 1 1 0
chr17:81868989|81869383 hsa-miR-6790-5p 1 0 0
chr17:81868989|81869383 hsa-miR-6724-5p 1 1 0
chr17:81868989|81869383 hsa-miR-6791-5p 1 1 0
chr17:81868989|81869383 hsa-miR-6762-5p 1 0 0
chr17:81868989|81869383 hsa-miR-10400-3p 1 1 0
chr17:81868989|81869383 hsa-miR-128-2-5p 0 1 0
chr17:81868989|81869383 hsa-miR-3616-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:81868989|81869383
ORF Type ORF1
Protein Length 82
Nucleotide Length 249
Protein Sequence MRHKEEGGQRPRFPAWQHAPKRPPLPCPGPHSLLTPFLYVCWMYFMPDTISRLTCRTRSEDQGRSVRTPAPAPPPFPGHSSL
Nucleotide Sequence CTGCGGCACAAGGAAGAGGGCGGTCAGCGGCCCCGCTTCCCCGCCTGGCAGCACGCACCCAAGCGGCCCCCTCTGCCCTGCCCGGGGCCCCACTCACTCTTGACGCCTTTCCTGTACGTATGCTGGATGTACTTCATGCCGGACACTATCTCTCGGTTAACCTGCAGGACCCGAAGCGAGGATCAGGGAAGGTCGGTCCGGACCCCAGCCCCAGCCCCGCCTCCATTCCCTGGCCACAGCAGCCTGTAG
CircID chr17:81868989|81869383
ORF Type ORF2
Protein Length 26
Nucleotide Length 78
Protein Sequence MATAACSLPGKRFLSGTPHPPSAQTT
Nucleotide Sequence CTGGCCACAGCAGCCTGTAGCTTACCCGGAAAGAGATTTTTATCCGGTACTCCACACCCTCCTTCAGCACAAACGACT
CircID chr17:81868989|81869383
ORF Type ORF3
Protein Length 105
Nucleotide Length 315
Protein Sequence MSTAAQGRGRSAAPLPRLAARTQAAPSALPGAPLTLDAFPVRMLDVLHAGHYLSVNLQDPKRGSGKVGPDPSPSPASIPWPQQPVAYPERDFYPVLHTLLQHKRL
Nucleotide Sequence TTGTCAACTGCGGCACAAGGAAGAGGGCGGTCAGCGGCCCCGCTTCCCCGCCTGGCAGCACGCACCCAAGCGGCCCCCTCTGCCCTGCCCGGGGCCCCACTCACTCTTGACGCCTTTCCTGTACGTATGCTGGATGTACTTCATGCCGGACACTATCTCTCGGTTAACCTGCAGGACCCGAAGCGAGGATCAGGGAAGGTCGGTCCGGACCCCAGCCCCAGCCCCGCCTCCATTCCCTGGCCACAGCAGCCTGTAGCTTACCCGGAAAGAGATTTTTATCCGGTACTCCACACCCTCCTTCAGCACAAACGACTG
CircID chr17:81868989|81869383
ORF Type ORF4
Protein Length 37
Nucleotide Length 114
Protein Sequence MKEGVEYRIKISFRVSYRLLWPGNGGGAGAGVRTDLP
Nucleotide Sequence CTGAAGGAGGGTGTGGAGTACCGGATAAAAATCTCTTTCCGGGTAAGCTACAGGCTGCTGTGGCCAGGGAATGGAGGCGGGGCTGGGGCTGGGGTCCGGACCGACCTTCCCTGA
CircID chr17:81868989|81869383
ORF Type ORF5
Protein Length 47
Nucleotide Length 144
Protein Sequence MQVNREIVSGMKYIQHTYRKGVKSEWGPGQGRGGRLGACCQAGKRGR
Nucleotide Sequence CTGCAGGTTAACCGAGAGATAGTGTCCGGCATGAAGTACATCCAGCATACGTACAGGAAAGGCGTCAAGAGTGAGTGGGGCCCCGGGCAGGGCAGAGGGGGCCGCTTGGGTGCGTGCTGCCAGGCGGGGAAGCGGGGCCGCTGA
CircID chr17:81868989|81869383
ORF Type ORF6
Protein Length 26
Nucleotide Length 81
Protein Sequence MEAGLGLGSGPTFPDPRFGSCRLTER
Nucleotide Sequence ATGGAGGCGGGGCTGGGGCTGGGGTCCGGACCGACCTTCCCTGATCCTCGCTTCGGGTCCTGCAGGTTAACCGAGAGATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab