CircRNA Information

General Information
circRNA Basic Information
CircID chr17:82018911|82019040
Strand -
CircType exon
Host Gene ENSG00000169689.13;
Algorism CIRI2;
Sequence CTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGGCAGGGACTCCCCAGGTGCTGCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:82018911|82019040 hsa-miR-198 0 0 1
chr17:82018911|82019040 hsa-miR-148a-5p 0 0 1
chr17:82018911|82019040 hsa-miR-148a-3p 0 0 1
chr17:82018911|82019040 hsa-miR-122-5p 0 0 1
chr17:82018911|82019040 hsa-miR-122-3p 0 0 1
chr17:82018911|82019040 hsa-miR-152-5p 0 0 1
chr17:82018911|82019040 hsa-miR-152-3p 0 0 1
chr17:82018911|82019040 hsa-miR-148b-5p 0 0 1
chr17:82018911|82019040 hsa-miR-148b-3p 0 0 1
chr17:82018911|82019040 hsa-miR-432-5p 0 0 1
chr17:82018911|82019040 hsa-miR-432-3p 0 0 1
chr17:82018911|82019040 hsa-miR-648 0 0 1
chr17:82018911|82019040 hsa-miR-939-5p 0 0 1
chr17:82018911|82019040 hsa-miR-939-3p 0 0 1
chr17:82018911|82019040 hsa-miR-1825 0 0 1
chr17:82018911|82019040 hsa-miR-491-5p 0 0 1
chr17:82018911|82019040 hsa-miR-486-3p 0 0 1
chr17:82018911|82019040 hsa-miR-615-5p 0 0 1
chr17:82018911|82019040 hsa-miR-199a-5p 0 0 1
chr17:82018911|82019040 hsa-miR-1289 0 0 1
chr17:82018911|82019040 hsa-miR-199b-5p 0 0 1
chr17:82018911|82019040 hsa-miR-1302 0 0 1
chr17:82018911|82019040 hsa-miR-509-3-5p 0 0 1
chr17:82018911|82019040 hsa-miR-509-5p 0 0 1
chr17:82018911|82019040 hsa-miR-637 0 1 0
chr17:82018911|82019040 hsa-miR-1976 1 0 0
chr17:82018911|82019040 hsa-miR-3183 1 0 0
chr17:82018911|82019040 hsa-miR-4298 0 1 0
chr17:82018911|82019040 hsa-miR-4322 1 0 0
chr17:82018911|82019040 hsa-miR-4279 0 1 0
chr17:82018911|82019040 hsa-miR-4519 1 0 0
chr17:82018911|82019040 hsa-miR-4654 1 0 0
chr17:82018911|82019040 hsa-miR-4688 1 0 0
chr17:82018911|82019040 hsa-miR-4734 0 1 0
chr17:82018911|82019040 hsa-miR-4741 1 0 0
chr17:82018911|82019040 hsa-miR-8089 1 0 0
chr17:82018911|82019040 hsa-miR-17-3p 0 1 0
chr17:82018911|82019040 hsa-miR-6747-3p 0 1 0
chr17:82018911|82019040 hsa-miR-3150a-3p 0 1 0
chr17:82018911|82019040 hsa-miR-1915-5p 1 0 0
chr17:82018911|82019040 hsa-miR-6845-3p 1 0 0
chr17:82018911|82019040 hsa-miR-6805-5p 0 1 0
chr17:82018911|82019040 hsa-miR-6765-3p 0 1 0
chr17:82018911|82019040 hsa-miR-6882-3p 1 0 0
chr17:82018911|82019040 hsa-miR-6786-5p 1 0 0
chr17:82018911|82019040 hsa-miR-6852-5p 0 1 0
chr17:82018911|82019040 hsa-miR-7113-3p 1 0 0
chr17:82018911|82019040 hsa-miR-6749-5p 1 0 0
chr17:82018911|82019040 hsa-miR-194-3p 0 1 0
chr17:82018911|82019040 hsa-miR-3065-3p 0 1 0
chr17:82018911|82019040 hsa-miR-3189-3p 0 1 0
chr17:82018911|82019040 hsa-miR-490-3p 0 1 0
chr17:82018911|82019040 hsa-miR-4776-3p 1 0 0
chr17:82018911|82019040 hsa-miR-2114-5p 0 1 0
chr17:82018911|82019040 hsa-miR-4746-3p 1 0 0
chr17:82018911|82019040 hsa-miR-6752-3p 0 1 0
chr17:82018911|82019040 hsa-miR-3173-5p 0 1 0
chr17:82018911|82019040 hsa-miR-4763-3p 1 0 0
chr17:82018911|82019040 hsa-miR-6812-5p 1 0 0
chr17:82018911|82019040 hsa-miR-6816-5p 1 0 0
chr17:82018911|82019040 hsa-miR-6743-5p 0 1 0
chr17:82018911|82019040 hsa-miR-6756-5p 1 0 0
chr17:82018911|82019040 hsa-miR-10401-5p 1 0 0
chr17:82018911|82019040 hsa-miR-6763-5p 1 0 0
chr17:82018911|82019040 hsa-miR-5196-5p 1 0 0
chr17:82018911|82019040 hsa-miR-6777-5p 1 0 0
chr17:82018911|82019040 hsa-miR-6791-5p 1 0 0
chr17:82018911|82019040 hsa-miR-4722-3p 1 0 0
chr17:82018911|82019040 hsa-miR-5699-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:82018911|82019040
ORF Type ORF1
Protein Length 43
Nucleotide Length 129
Protein Sequence LPVGPRVACTLLSQGGEAGTPQVLPLPTPVSPLDTPRPAVHCS
Nucleotide Sequence CTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGGCAGGGACTCCCCAGGTGCTGCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGT

CircID chr17:82018911|82019040
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MHTIVPGRRGRDSPGAAPSHTSVPTGHSKARSALQ
Nucleotide Sequence ATGCACACTATTGTCCCAGGGAGGAGAGGCAGGGACTCCCCAGGTGCTGCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAG

CircID chr17:82018911|82019040
ORF Type ORF3
Protein Length 39
Nucleotide Length 117
Protein Sequence MRALECPVGTLVWEGAAPGESLPLLPGTIVCMPPGVLQA
Nucleotide Sequence CTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGCAGCACCTGGGGAGTCCCTGCCTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCA

CircID chr17:82018911|82019040
ORF Type ORF4
Protein Length 42
Nucleotide Length 126
Protein Sequence LQCTAGLGVSSGDTGVGRGSTWGVPASPPWDNSVHATRGPTG
Nucleotide Sequence CTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGCAGCACCTGGGGAGTCCCTGCCTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites