CircRNA Information

General Information
circRNA Basic Information
CircID chr17:82035967|82036252
Strand +
CircType exon
Host Gene ENSG00000169738.6;
Algorism CIRI2;
Sequence CTGGAGTGACCCCCACAAGGCCAAGACTATGCTGAACCGAATCCCACTTGGCAAGTTTGCTGGTGAGTCAGGTGGGAGCCCAGCCAGCGTGGTGCCAGCAGTCCCTGTGTGTGCCCTGGGTAGGGGTGGGAGGGAAAGATGGGCGGCAGCCTCCTTCCTCTATGCCCCTGACCCCCGCCCTGCCCACAGAGGTAGAGCACGTGGTGAACGCCATCCTCTTTCTGCTGAGTGACCGAAGTGGCATGACCACGGGTTCCACTTTGCCGGTGGAAGGGGGCTTCTGGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:82035967|82036252 hsa-miR-197-5p 0 0 1
chr17:82035967|82036252 hsa-miR-197-3p 0 0 1
chr17:82035967|82036252 hsa-miR-214-5p 0 0 1
chr17:82035967|82036252 hsa-miR-214-3p 0 0 1
chr17:82035967|82036252 hsa-miR-345-5p 0 0 1
chr17:82035967|82036252 hsa-miR-345-3p 0 0 1
chr17:82035967|82036252 hsa-miR-520g-5p 0 0 1
chr17:82035967|82036252 hsa-miR-520g-3p 0 0 1
chr17:82035967|82036252 hsa-miR-520h 0 0 1
chr17:82035967|82036252 hsa-miR-545-5p 0 0 1
chr17:82035967|82036252 hsa-miR-545-3p 0 0 1
chr17:82035967|82036252 hsa-miR-583 0 0 1
chr17:82035967|82036252 hsa-miR-634 0 0 1
chr17:82035967|82036252 hsa-miR-668-5p 0 0 1
chr17:82035967|82036252 hsa-miR-668-3p 0 0 1
chr17:82035967|82036252 hsa-miR-877-5p 0 0 1
chr17:82035967|82036252 hsa-miR-877-3p 0 0 1
chr17:82035967|82036252 hsa-miR-922 0 1 1
chr17:82035967|82036252 hsa-miR-1226-5p 0 0 1
chr17:82035967|82036252 hsa-miR-1226-3p 0 0 1
chr17:82035967|82036252 hsa-miR-1288-5p 0 0 1
chr17:82035967|82036252 hsa-miR-1288-3p 0 0 1
chr17:82035967|82036252 hsa-miR-512-5p 0 1 1
chr17:82035967|82036252 hsa-miR-491-5p 0 0 1
chr17:82035967|82036252 hsa-miR-532-3p 0 1 1
chr17:82035967|82036252 hsa-miR-485-5p 0 0 1
chr17:82035967|82036252 hsa-miR-508-5p 0 0 1
chr17:82035967|82036252 hsa-miR-1224-3p 0 0 1
chr17:82035967|82036252 hsa-miR-1207-5p 0 1 1
chr17:82035967|82036252 hsa-miR-483-3p 0 0 1
chr17:82035967|82036252 hsa-miR-220b 0 0 1
chr17:82035967|82036252 hsa-miR-1260 0 0 1
chr17:82035967|82036252 hsa-miR-1280 0 0 1
chr17:82035967|82036252 hsa-miR-642 0 0 1
chr17:82035967|82036252 hsa-miR-220c 0 0 1
chr17:82035967|82036252 hsa-miR-663 0 0 1
chr17:82035967|82036252 hsa-miR-638 1 0 0
chr17:82035967|82036252 hsa-miR-663a 0 1 0
chr17:82035967|82036252 hsa-miR-298 0 1 0
chr17:82035967|82036252 hsa-miR-936 0 1 0
chr17:82035967|82036252 hsa-miR-1260a 0 1 0
chr17:82035967|82036252 hsa-miR-3141 0 1 0
chr17:82035967|82036252 hsa-miR-1260b 0 1 0
chr17:82035967|82036252 hsa-miR-4322 0 1 0
chr17:82035967|82036252 hsa-miR-4291 0 1 0
chr17:82035967|82036252 hsa-miR-3916 1 1 0
chr17:82035967|82036252 hsa-miR-3945 0 1 0
chr17:82035967|82036252 hsa-miR-4505 0 1 0
chr17:82035967|82036252 hsa-miR-4533 1 1 0
chr17:82035967|82036252 hsa-miR-4654 0 1 0
chr17:82035967|82036252 hsa-miR-4688 0 1 0
chr17:82035967|82036252 hsa-miR-4706 1 0 0
chr17:82035967|82036252 hsa-miR-4739 1 0 0
chr17:82035967|82036252 hsa-miR-6132 0 1 0
chr17:82035967|82036252 hsa-miR-6133 1 1 0
chr17:82035967|82036252 hsa-miR-6860 0 1 0
chr17:82035967|82036252 hsa-miR-8052 0 1 0
chr17:82035967|82036252 hsa-miR-12117 0 1 0
chr17:82035967|82036252 hsa-miR-12125 0 1 0
chr17:82035967|82036252 hsa-miR-6894-5p 1 0 0
chr17:82035967|82036252 hsa-miR-210-5p 0 1 0
chr17:82035967|82036252 hsa-miR-4695-5p 0 1 0
chr17:82035967|82036252 hsa-miR-593-5p 0 1 0
chr17:82035967|82036252 hsa-miR-6842-3p 0 1 0
chr17:82035967|82036252 hsa-miR-3187-3p 1 0 0
chr17:82035967|82036252 hsa-miR-6768-5p 0 1 0
chr17:82035967|82036252 hsa-miR-1229-5p 0 1 0
chr17:82035967|82036252 hsa-miR-6753-5p 1 1 0
chr17:82035967|82036252 hsa-miR-5001-3p 0 1 0
chr17:82035967|82036252 hsa-miR-1228-5p 0 1 0
chr17:82035967|82036252 hsa-miR-767-5p 0 1 0
chr17:82035967|82036252 hsa-miR-6830-3p 0 1 0
chr17:82035967|82036252 hsa-miR-4787-5p 0 1 0
chr17:82035967|82036252 hsa-miR-4446-5p 0 1 0
chr17:82035967|82036252 hsa-miR-423-5p 0 1 0
chr17:82035967|82036252 hsa-miR-6743-3p 0 1 0
chr17:82035967|82036252 hsa-let-7e-5p 1 0 0
chr17:82035967|82036252 hsa-miR-4632-3p 0 1 0
chr17:82035967|82036252 hsa-miR-5089-5p 0 1 0
chr17:82035967|82036252 hsa-miR-6767-3p 0 1 0
chr17:82035967|82036252 hsa-miR-3177-5p 1 0 0
chr17:82035967|82036252 hsa-miR-4763-3p 1 1 0
chr17:82035967|82036252 hsa-miR-6787-5p 0 1 0
chr17:82035967|82036252 hsa-miR-6775-5p 1 1 0
chr17:82035967|82036252 hsa-miR-6743-5p 0 1 0
chr17:82035967|82036252 hsa-miR-6756-5p 1 0 0
chr17:82035967|82036252 hsa-miR-6803-5p 0 1 0
chr17:82035967|82036252 hsa-miR-3127-3p 0 1 0
chr17:82035967|82036252 hsa-miR-1915-3p 0 1 0
chr17:82035967|82036252 hsa-miR-10396b-5p 0 1 0
chr17:82035967|82036252 hsa-miR-4685-5p 0 1 0
chr17:82035967|82036252 hsa-miR-1266-5p 0 1 0
chr17:82035967|82036252 hsa-miR-3679-5p 1 0 0
chr17:82035967|82036252 hsa-miR-4747-5p 1 1 0
chr17:82035967|82036252 hsa-miR-6876-5p 0 1 0
chr17:82035967|82036252 hsa-miR-10398-5p 0 1 0
chr17:82035967|82036252 hsa-miR-9851-5p 0 1 0
chr17:82035967|82036252 hsa-miR-6756-3p 0 1 0
chr17:82035967|82036252 hsa-miR-10400-3p 0 1 0
chr17:82035967|82036252 hsa-miR-6837-5p 1 1 0
chr17:82035967|82036252 hsa-miR-9851-3p 0 1 0
chr17:82035967|82036252 hsa-miR-3622a-3p 0 1 0
chr17:82035967|82036252 hsa-miR-4756-5p 1 0 0
chr17:82035967|82036252 hsa-miR-6764-5p 0 1 0
chr17:82035967|82036252 hsa-miR-6504-5p 0 1 0
chr17:82035967|82036252 hsa-miR-3622b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:82035967|82036252
ORF Type ORF1
Protein Length 67
Nucleotide Length 204
Protein Sequence MLNRIPLGKFAGESGGSPASVVPAVPVCALGRGGRERWAAASFLYAPDPRPAHRGRARGERHPLSAE
Nucleotide Sequence ATGCTGAACCGAATCCCACTTGGCAAGTTTGCTGGTGAGTCAGGTGGGAGCCCAGCCAGCGTGGTGCCAGCAGTCCCTGTGTGTGCCCTGGGTAGGGGTGGGAGGGAAAGATGGGCGGCAGCCTCCTTCCTCTATGCCCCTGACCCCCGCCCTGCCCACAGAGGTAGAGCACGTGGTGAACGCCATCCTCTTTCTGCTGAGTGA
CircID chr17:82035967|82036252
ORF Type ORF2
Protein Length 79
Nucleotide Length 237
Protein Sequence MASLLVSQVGAQPAWCQQSLCVPWVGVGGKDGRQPPSSMPLTPALPTEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFW
Nucleotide Sequence TTGGCAAGTTTGCTGGTGAGTCAGGTGGGAGCCCAGCCAGCGTGGTGCCAGCAGTCCCTGTGTGTGCCCTGGGTAGGGGTGGGAGGGAAAGATGGGCGGCAGCCTCCTTCCTCTATGCCCCTGACCCCCGCCCTGCCCACAGAGGTAGAGCACGTGGTGAACGCCATCCTCTTTCTGCTGAGTGACCGAAGTGGCATGACCACGGGTTCCACTTTGCCGGTGGAAGGGGGCTTCTGG
CircID chr17:82035967|82036252
ORF Type ORF3
Protein Length 58
Nucleotide Length 177
Protein Sequence MPLRSLSRKRMAFTTCSTSVGRAGVRGIEEGGCRPSFPPTPTQGTHRDCWHHAGWAPT
Nucleotide Sequence ATGCCACTTCGGTCACTCAGCAGAAAGAGGATGGCGTTCACCACGTGCTCTACCTCTGTGGGCAGGGCGGGGGTCAGGGGCATAGAGGAAGGAGGCTGCCGCCCATCTTTCCCTCCCACCCCTACCCAGGGCACACACAGGGACTGCTGGCACCACGCTGGCTGGGCTCCCACCTGA
CircID chr17:82035967|82036252
ORF Type ORF4
Protein Length 29
Nucleotide Length 87
Protein Sequence MAGLPPDSPANLPSGIRFSIVLALWGSLQ
Nucleotide Sequence CTGGCTGGGCTCCCACCTGACTCACCAGCAAACTTGCCAAGTGGGATTCGGTTCAGCATAGTCTTGGCCTTGTGGGGGTCACTCCAG
CircID chr17:82035967|82036252
ORF Type ORF5
Protein Length 40
Nucleotide Length 123
Protein Sequence MPPIFPSHPYPGHTQGLLAPRWLGSHLTHQQTCQVGFGSA
Nucleotide Sequence CTGCCGCCCATCTTTCCCTCCCACCCCTACCCAGGGCACACACAGGGACTGCTGGCACCACGCTGGCTGGGCTCCCACCTGACTCACCAGCAAACTTGCCAAGTGGGATTCGGTTCAGCATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab