CircRNA Information

General Information
circRNA Basic Information
CircID chr17:82054667|82054975
Strand +
CircType exon
Host Gene ENSG00000169727.11;
Algorism CIRI2;
Sequence CTCGGCAATCTCTGGGGTGGACTCAGCCTTGCTGACGTAGCTGAGCACATGAGACCAATTCTGCAAGTAGACGCTGACCTGGCGGGGGGGCGCAGAGCCAAGTGAGCCCGGGCGCCCCAATGGCCCAGCCATGCTGCCCACCCCCGCCCGCCGAGGCAGGCCGACCTTGATGACATTGAGGCACATGTTGATGACGTGTTTGGCGCTGGTGCAGTAGTCCCGGGCCCGGGAATAGCACTTGAGGGCGTTGCTGAGGTCCCCACAGTCCAGGTAGTGGTCGCCCAGGTCGTCGTGGCCGCGCCGGATGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:82054667|82054975 hsa-miR-107 0 1 1
chr17:82054667|82054975 hsa-miR-217-5p 0 0 1
chr17:82054667|82054975 hsa-miR-217-3p 0 0 1
chr17:82054667|82054975 hsa-miR-302a-5p 0 0 1
chr17:82054667|82054975 hsa-miR-302a-3p 0 0 1
chr17:82054667|82054975 hsa-miR-302b-5p 0 0 1
chr17:82054667|82054975 hsa-miR-302b-3p 0 0 1
chr17:82054667|82054975 hsa-miR-302c-5p 0 0 1
chr17:82054667|82054975 hsa-miR-302c-3p 0 0 1
chr17:82054667|82054975 hsa-miR-302d-5p 0 0 1
chr17:82054667|82054975 hsa-miR-302d-3p 0 0 1
chr17:82054667|82054975 hsa-miR-372-5p 0 0 1
chr17:82054667|82054975 hsa-miR-372-3p 0 0 1
chr17:82054667|82054975 hsa-miR-373-5p 0 0 1
chr17:82054667|82054975 hsa-miR-373-3p 0 0 1
chr17:82054667|82054975 hsa-miR-422a 0 1 1
chr17:82054667|82054975 hsa-miR-520e-5p 0 0 1
chr17:82054667|82054975 hsa-miR-520e-3p 0 0 1
chr17:82054667|82054975 hsa-miR-520b-5p 0 0 1
chr17:82054667|82054975 hsa-miR-520b-3p 0 0 1
chr17:82054667|82054975 hsa-miR-545-5p 0 0 1
chr17:82054667|82054975 hsa-miR-545-3p 0 0 1
chr17:82054667|82054975 hsa-miR-598-5p 0 0 1
chr17:82054667|82054975 hsa-miR-598-3p 0 0 1
chr17:82054667|82054975 hsa-miR-608 1 0 1
chr17:82054667|82054975 hsa-miR-619-5p 0 0 1
chr17:82054667|82054975 hsa-miR-619-3p 0 0 1
chr17:82054667|82054975 hsa-miR-631 0 1 1
chr17:82054667|82054975 hsa-miR-298 0 0 1
chr17:82054667|82054975 hsa-miR-541-5p 0 0 1
chr17:82054667|82054975 hsa-miR-541-3p 0 0 1
chr17:82054667|82054975 hsa-miR-760 0 0 1
chr17:82054667|82054975 hsa-miR-934 0 0 1
chr17:82054667|82054975 hsa-miR-1226-5p 0 0 1
chr17:82054667|82054975 hsa-miR-1226-3p 0 0 1
chr17:82054667|82054975 hsa-miR-1234-3p 0 0 1
chr17:82054667|82054975 hsa-miR-302e 0 0 1
chr17:82054667|82054975 hsa-miR-1288-5p 0 0 1
chr17:82054667|82054975 hsa-miR-1288-3p 0 0 1
chr17:82054667|82054975 hsa-miR-1307-5p 0 0 1
chr17:82054667|82054975 hsa-miR-1307-3p 0 0 1
chr17:82054667|82054975 hsa-miR-1234 0 0 1
chr17:82054667|82054975 hsa-miR-491-5p 0 1 1
chr17:82054667|82054975 hsa-miR-767-5p 0 0 1
chr17:82054667|82054975 hsa-miR-654-5p 0 1 1
chr17:82054667|82054975 hsa-miR-455-5p 0 0 1
chr17:82054667|82054975 hsa-miR-520d-3p 1 1 1
chr17:82054667|82054975 hsa-miR-509-3-5p 0 0 1
chr17:82054667|82054975 hsa-miR-509-5p 0 0 1
chr17:82054667|82054975 hsa-miR-520a-3p 0 1 1
chr17:82054667|82054975 hsa-miR-520c-3p 0 0 1
chr17:82054667|82054975 hsa-miR-550 0 0 1
chr17:82054667|82054975 hsa-miR-103 0 0 1
chr17:82054667|82054975 hsa-miR-378 0 0 1
chr17:82054667|82054975 hsa-miR-1269 0 0 1
chr17:82054667|82054975 hsa-miR-663 0 0 1
chr17:82054667|82054975 hsa-miR-612 1 0 0
chr17:82054667|82054975 hsa-miR-661 1 1 0
chr17:82054667|82054975 hsa-miR-663a 1 0 0
chr17:82054667|82054975 hsa-miR-762 1 0 0
chr17:82054667|82054975 hsa-miR-1538 1 1 0
chr17:82054667|82054975 hsa-miR-378b 0 1 0
chr17:82054667|82054975 hsa-miR-3196 1 0 0
chr17:82054667|82054975 hsa-miR-378c 0 1 0
chr17:82054667|82054975 hsa-miR-3649 0 1 0
chr17:82054667|82054975 hsa-miR-378e 0 1 0
chr17:82054667|82054975 hsa-miR-378f 0 1 0
chr17:82054667|82054975 hsa-miR-4449 1 0 0
chr17:82054667|82054975 hsa-miR-378h 0 1 0
chr17:82054667|82054975 hsa-miR-4479 0 1 0
chr17:82054667|82054975 hsa-miR-4488 1 0 0
chr17:82054667|82054975 hsa-miR-4505 0 1 0
chr17:82054667|82054975 hsa-miR-4651 1 0 0
chr17:82054667|82054975 hsa-miR-5572 1 0 0
chr17:82054667|82054975 hsa-miR-5787 0 1 0
chr17:82054667|82054975 hsa-miR-9899 1 1 0
chr17:82054667|82054975 hsa-miR-134-3p 0 1 0
chr17:82054667|82054975 hsa-miR-3194-3p 0 1 0
chr17:82054667|82054975 hsa-miR-7851-3p 0 1 0
chr17:82054667|82054975 hsa-miR-6732-5p 1 0 0
chr17:82054667|82054975 hsa-miR-3130-3p 0 1 0
chr17:82054667|82054975 hsa-miR-6782-5p 1 0 0
chr17:82054667|82054975 hsa-miR-615-5p 1 0 0
chr17:82054667|82054975 hsa-miR-6786-5p 1 0 0
chr17:82054667|82054975 hsa-miR-939-3p 1 1 0
chr17:82054667|82054975 hsa-miR-4707-3p 1 0 0
chr17:82054667|82054975 hsa-miR-3944-3p 0 1 0
chr17:82054667|82054975 hsa-miR-4640-5p 1 0 0
chr17:82054667|82054975 hsa-miR-3614-5p 0 1 0
chr17:82054667|82054975 hsa-miR-4787-5p 1 1 0
chr17:82054667|82054975 hsa-miR-103a-3p 0 1 0
chr17:82054667|82054975 hsa-miR-6789-5p 1 0 0
chr17:82054667|82054975 hsa-miR-550b-2-5p 0 1 0
chr17:82054667|82054975 hsa-miR-4708-3p 0 1 0
chr17:82054667|82054975 hsa-miR-2277-5p 1 0 0
chr17:82054667|82054975 hsa-miR-6789-3p 1 1 0
chr17:82054667|82054975 hsa-miR-6790-3p 1 1 0
chr17:82054667|82054975 hsa-miR-4763-3p 1 0 0
chr17:82054667|82054975 hsa-miR-6787-5p 1 1 0
chr17:82054667|82054975 hsa-miR-6816-5p 1 0 0
chr17:82054667|82054975 hsa-miR-6737-5p 1 0 0
chr17:82054667|82054975 hsa-miR-6752-5p 1 1 0
chr17:82054667|82054975 hsa-miR-6756-5p 1 1 0
chr17:82054667|82054975 hsa-miR-6769a-5p 1 0 0
chr17:82054667|82054975 hsa-miR-6803-5p 1 1 0
chr17:82054667|82054975 hsa-miR-6819-5p 1 0 0
chr17:82054667|82054975 hsa-miR-6751-5p 1 0 0
chr17:82054667|82054975 hsa-miR-3620-5p 1 0 0
chr17:82054667|82054975 hsa-miR-10396b-5p 0 1 0
chr17:82054667|82054975 hsa-miR-1237-5p 1 0 0
chr17:82054667|82054975 hsa-miR-328-5p 1 0 0
chr17:82054667|82054975 hsa-miR-4632-5p 1 1 0
chr17:82054667|82054975 hsa-miR-4649-5p 1 0 0
chr17:82054667|82054975 hsa-miR-4726-5p 1 0 0
chr17:82054667|82054975 hsa-miR-4745-3p 0 1 0
chr17:82054667|82054975 hsa-miR-3085-5p 1 0 0
chr17:82054667|82054975 hsa-miR-4664-5p 1 0 0
chr17:82054667|82054975 hsa-miR-378a-3p 0 1 0
chr17:82054667|82054975 hsa-miR-6766-5p 0 1 0
chr17:82054667|82054975 hsa-miR-6805-3p 1 1 0
chr17:82054667|82054975 hsa-miR-6848-3p 0 1 0
chr17:82054667|82054975 hsa-miR-6843-3p 0 1 0
chr17:82054667|82054975 hsa-miR-378d 0 1 0
chr17:82054667|82054975 hsa-miR-4999-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:82054667|82054975
ORF Type ORF1
Protein Length 47
Nucleotide Length 144
Protein Sequence MTWRGGAEPSEPGRPNGPAMLPTPARRGRPTLMTLRHMLMTCLALVQ
Nucleotide Sequence CTGACCTGGCGGGGGGGCGCAGAGCCAAGTGAGCCCGGGCGCCCCAATGGCCCAGCCATGCTGCCCACCCCCGCCCGCCGAGGCAGGCCGACCTTGATGACATTGAGGCACATGTTGATGACGTGTTTGGCGCTGGTGCAGTAG

CircID chr17:82054667|82054975
ORF Type ORF2
Protein Length 95
Nucleotide Length 285
Protein Sequence MGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVGLPRRAGVGSMAGPLGRPGSLGSAPPRQVSVYLQNWSHVLSYVSKAESTPEIAE
Nucleotide Sequence CTGGGCGACCACTACCTGGACTGTGGGGACCTCAGCAACGCCCTCAAGTGCTATTCCCGGGCCCGGGACTACTGCACCAGCGCCAAACACGTCATCAACATGTGCCTCAATGTCATCAAGGTCGGCCTGCCTCGGCGGGCGGGGGTGGGCAGCATGGCTGGGCCATTGGGGCGCCCGGGCTCACTTGGCTCTGCGCCCCCCCGCCAGGTCAGCGTCTACTTGCAGAATTGGTCTCATGTGCTCAGCTACGTCAGCAAGGCTGAGTCCACCCCAGAGATTGCCGAG

CircID chr17:82054667|82054975
ORF Type ORF3
Protein Length 58
Nucleotide Length 174
Protein Sequence MSSRSACLGGRGWAAWLGHWGARAHLALRPPARSASTCRIGLMCSATSARLSPPQRLP
Nucleotide Sequence ATGTCATCAAGGTCGGCCTGCCTCGGCGGGCGGGGGTGGGCAGCATGGCTGGGCCATTGGGGCGCCCGGGCTCACTTGGCTCTGCGCCCCCCCGCCAGGTCAGCGTCTACTTGCAGAATTGGTCTCATGTGCTCAGCTACGTCAGCAAGGCTGAGTCCACCCCAGAGATTGCCG

CircID chr17:82054667|82054975
ORF Type ORF4
Protein Length 80
Nucleotide Length 243
Protein Sequence MWGPQQRPQVLFPGPGLLHQRQTRHQHVPQCHQGRPASAGGGGQHGWAIGAPGLTWLCAPPPGQRLLAELVSCAQLRQQG
Nucleotide Sequence CTGTGGGGACCTCAGCAACGCCCTCAAGTGCTATTCCCGGGCCCGGGACTACTGCACCAGCGCCAAACACGTCATCAACATGTGCCTCAATGTCATCAAGGTCGGCCTGCCTCGGCGGGCGGGGGTGGGCAGCATGGCTGGGCCATTGGGGCGCCCGGGCTCACTTGGCTCTGCGCCCCCCCGCCAGGTCAGCGTCTACTTGCAGAATTGGTCTCATGTGCTCAGCTACGTCAGCAAGGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites