CircRNA Information

General Information
circRNA Basic Information
CircID chr17:82081276|82081650
Strand -
CircType exon
Host Gene ENSG00000169710.6;
Algorism CIRI2;
Sequence CTCCACGCTCATGAGCGAGTCCAGGCCCAGGTCCGCCAGTGAGCTGTCCAGGTTGACAGCAGCCAAGTCGCGGATGCCTGGAAGGGATGCGCCGGGTCGGCAACTCCAGAGGGGGCATGGGGACGGCCTGTATGCGGCAGGGCTGACACCCAGGGGTGCGTGGGCTGTGCATCTCCCAAAGCACCACCACCACAGTGACACCTGCGCCCGCACCCTGGCTCTGCAGATGGGGAAACTGAGGCGCACAGGGGCACGACTGCTATGTCCCAAGACCCTGATGCCAGCAGGGGAAACACCTGGCGCGGCTCCTACTGGGAGTGCTCACCCAGGATGTGTGCCACGGCCTCCACCAGGTCCCGCTGGCTGTCCCTGTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:82081276|82081650 hsa-miR-370-5p 0 0 1
chr17:82081276|82081650 hsa-miR-370-3p 0 0 1
chr17:82081276|82081650 hsa-miR-422a 0 0 1
chr17:82081276|82081650 hsa-miR-492 0 1 1
chr17:82081276|82081650 hsa-miR-505-5p 0 0 1
chr17:82081276|82081650 hsa-miR-505-3p 0 0 1
chr17:82081276|82081650 hsa-miR-597-5p 0 0 1
chr17:82081276|82081650 hsa-miR-597-3p 0 0 1
chr17:82081276|82081650 hsa-miR-604 0 0 1
chr17:82081276|82081650 hsa-miR-609 0 0 1
chr17:82081276|82081650 hsa-miR-619-5p 0 0 1
chr17:82081276|82081650 hsa-miR-619-3p 0 0 1
chr17:82081276|82081650 hsa-miR-626 0 0 1
chr17:82081276|82081650 hsa-miR-631 0 1 1
chr17:82081276|82081650 hsa-miR-635 0 0 1
chr17:82081276|82081650 hsa-miR-647 0 1 1
chr17:82081276|82081650 hsa-miR-650 0 0 1
chr17:82081276|82081650 hsa-miR-668-5p 0 0 1
chr17:82081276|82081650 hsa-miR-668-3p 0 0 1
chr17:82081276|82081650 hsa-miR-675-5p 0 0 1
chr17:82081276|82081650 hsa-miR-675-3p 0 0 1
chr17:82081276|82081650 hsa-miR-708-5p 0 0 1
chr17:82081276|82081650 hsa-miR-708-3p 0 0 1
chr17:82081276|82081650 hsa-miR-933 0 0 1
chr17:82081276|82081650 hsa-miR-1182 1 1 1
chr17:82081276|82081650 hsa-miR-1205 0 0 1
chr17:82081276|82081650 hsa-miR-1208 0 0 1
chr17:82081276|82081650 hsa-miR-1262 0 1 1
chr17:82081276|82081650 hsa-miR-324-5p 0 1 1
chr17:82081276|82081650 hsa-miR-193a-5p 0 0 1
chr17:82081276|82081650 hsa-miR-941 0 0 1
chr17:82081276|82081650 hsa-miR-1184 0 0 1
chr17:82081276|82081650 hsa-miR-490-3p 0 1 1
chr17:82081276|82081650 hsa-miR-28-5p 0 0 1
chr17:82081276|82081650 hsa-miR-331-3p 0 1 1
chr17:82081276|82081650 hsa-miR-188-5p 1 1 1
chr17:82081276|82081650 hsa-miR-876-3p 0 0 1
chr17:82081276|82081650 hsa-miR-1302 0 1 1
chr17:82081276|82081650 hsa-miR-323-5p 0 0 1
chr17:82081276|82081650 hsa-miR-378 0 0 1
chr17:82081276|82081650 hsa-miR-516b 0 0 1
chr17:82081276|82081650 hsa-miR-1254 0 0 1
chr17:82081276|82081650 hsa-miR-608 1 0 0
chr17:82081276|82081650 hsa-miR-623 1 0 0
chr17:82081276|82081650 hsa-miR-638 1 0 0
chr17:82081276|82081650 hsa-miR-661 1 1 0
chr17:82081276|82081650 hsa-miR-1538 1 0 0
chr17:82081276|82081650 hsa-miR-1913 1 0 0
chr17:82081276|82081650 hsa-miR-2861 1 1 0
chr17:82081276|82081650 hsa-miR-3122 0 1 0
chr17:82081276|82081650 hsa-miR-378c 0 1 0
chr17:82081276|82081650 hsa-miR-4322 1 0 0
chr17:82081276|82081650 hsa-miR-4260 0 1 0
chr17:82081276|82081650 hsa-miR-4274 0 1 0
chr17:82081276|82081650 hsa-miR-4292 0 1 0
chr17:82081276|82081650 hsa-miR-3649 0 1 0
chr17:82081276|82081650 hsa-miR-3661 0 1 0
chr17:82081276|82081650 hsa-miR-1268b 1 0 0
chr17:82081276|82081650 hsa-miR-378g 0 1 0
chr17:82081276|82081650 hsa-miR-4443 0 1 0
chr17:82081276|82081650 hsa-miR-4449 1 0 0
chr17:82081276|82081650 hsa-miR-378h 0 1 0
chr17:82081276|82081650 hsa-miR-4466 1 1 0
chr17:82081276|82081650 hsa-miR-4469 0 1 0
chr17:82081276|82081650 hsa-miR-4642 1 0 0
chr17:82081276|82081650 hsa-miR-4688 1 1 0
chr17:82081276|82081650 hsa-miR-4754 1 0 0
chr17:82081276|82081650 hsa-miR-4767 1 0 0
chr17:82081276|82081650 hsa-miR-7974 1 0 0
chr17:82081276|82081650 hsa-miR-9899 1 0 0
chr17:82081276|82081650 hsa-miR-211-3p 0 1 0
chr17:82081276|82081650 hsa-miR-135a-3p 1 0 0
chr17:82081276|82081650 hsa-miR-150-3p 0 1 0
chr17:82081276|82081650 hsa-miR-4747-3p 1 0 0
chr17:82081276|82081650 hsa-miR-128-1-5p 1 1 0
chr17:82081276|82081650 hsa-miR-3194-3p 0 1 0
chr17:82081276|82081650 hsa-miR-4665-3p 1 0 0
chr17:82081276|82081650 hsa-miR-6836-3p 1 0 0
chr17:82081276|82081650 hsa-miR-6861-5p 1 0 0
chr17:82081276|82081650 hsa-miR-4708-5p 0 1 0
chr17:82081276|82081650 hsa-miR-210-5p 0 1 0
chr17:82081276|82081650 hsa-miR-27a-5p 1 0 0
chr17:82081276|82081650 hsa-miR-3692-5p 0 1 0
chr17:82081276|82081650 hsa-miR-3934-5p 0 1 0
chr17:82081276|82081650 hsa-miR-6089 1 0 0
chr17:82081276|82081650 hsa-miR-1225-3p 1 0 0
chr17:82081276|82081650 hsa-miR-6880-5p 0 1 0
chr17:82081276|82081650 hsa-miR-7847-3p 0 1 0
chr17:82081276|82081650 hsa-miR-6741-5p 1 0 0
chr17:82081276|82081650 hsa-miR-6762-3p 0 1 0
chr17:82081276|82081650 hsa-miR-3189-5p 1 0 0
chr17:82081276|82081650 hsa-miR-7845-5p 1 1 0
chr17:82081276|82081650 hsa-miR-4711-5p 0 1 0
chr17:82081276|82081650 hsa-miR-1343-3p 1 1 0
chr17:82081276|82081650 hsa-miR-939-3p 0 1 0
chr17:82081276|82081650 hsa-miR-3186-5p 0 1 0
chr17:82081276|82081650 hsa-miR-4640-5p 1 0 0
chr17:82081276|82081650 hsa-miR-30c-2-3p 0 1 0
chr17:82081276|82081650 hsa-miR-6749-5p 1 1 0
chr17:82081276|82081650 hsa-miR-4638-3p 0 1 0
chr17:82081276|82081650 hsa-miR-3690 0 1 0
chr17:82081276|82081650 hsa-miR-1304-3p 1 0 0
chr17:82081276|82081650 hsa-miR-937-5p 1 0 0
chr17:82081276|82081650 hsa-miR-6742-3p 0 1 0
chr17:82081276|82081650 hsa-miR-146b-3p 0 1 0
chr17:82081276|82081650 hsa-miR-3158-5p 0 1 0
chr17:82081276|82081650 hsa-miR-6825-3p 1 0 0
chr17:82081276|82081650 hsa-miR-3678-3p 0 1 0
chr17:82081276|82081650 hsa-miR-4707-5p 1 0 0
chr17:82081276|82081650 hsa-miR-6499-5p 0 1 0
chr17:82081276|82081650 hsa-miR-339-3p 1 0 0
chr17:82081276|82081650 hsa-miR-4746-3p 1 0 0
chr17:82081276|82081650 hsa-miR-6752-3p 0 1 0
chr17:82081276|82081650 hsa-miR-6872-3p 1 1 0
chr17:82081276|82081650 hsa-miR-891a-3p 0 1 0
chr17:82081276|82081650 hsa-miR-5581-3p 0 1 0
chr17:82081276|82081650 hsa-miR-4763-3p 1 0 0
chr17:82081276|82081650 hsa-miR-6812-5p 1 0 0
chr17:82081276|82081650 hsa-miR-6816-5p 1 0 0
chr17:82081276|82081650 hsa-miR-5001-5p 1 0 0
chr17:82081276|82081650 hsa-miR-6737-5p 1 0 0
chr17:82081276|82081650 hsa-miR-6743-5p 1 0 0
chr17:82081276|82081650 hsa-miR-6756-5p 1 0 0
chr17:82081276|82081650 hsa-miR-6851-5p 1 0 0
chr17:82081276|82081650 hsa-miR-3127-3p 1 1 0
chr17:82081276|82081650 hsa-miR-6836-5p 1 1 0
chr17:82081276|82081650 hsa-miR-4632-5p 1 0 0
chr17:82081276|82081650 hsa-miR-4649-5p 1 0 0
chr17:82081276|82081650 hsa-miR-4745-3p 1 0 0
chr17:82081276|82081650 hsa-miR-6848-5p 1 0 0
chr17:82081276|82081650 hsa-miR-3187-5p 0 1 0
chr17:82081276|82081650 hsa-miR-4697-5p 1 0 0
chr17:82081276|82081650 hsa-miR-30c-1-3p 0 1 0
chr17:82081276|82081650 hsa-miR-6799-3p 1 1 0
chr17:82081276|82081650 hsa-miR-6736-5p 0 1 0
chr17:82081276|82081650 hsa-miR-6791-3p 1 0 0
chr17:82081276|82081650 hsa-miR-6724-5p 1 0 0
chr17:82081276|82081650 hsa-miR-6791-5p 0 1 0
chr17:82081276|82081650 hsa-miR-6893-3p 0 1 0
chr17:82081276|82081650 hsa-miR-9851-5p 0 1 0
chr17:82081276|82081650 hsa-miR-6805-3p 1 0 0
chr17:82081276|82081650 hsa-miR-6775-3p 1 0 0
chr17:82081276|82081650 hsa-miR-10392-3p 1 0 0
chr17:82081276|82081650 hsa-miR-6783-3p 0 1 0
chr17:82081276|82081650 hsa-miR-5588-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:82081276|82081650
ORF Type ORF1
Protein Length 58
Nucleotide Length 174
Protein Sequence MRPHPGSADGETEAHRGTTAMSQDPDASRGNTWRGSYWECSPRMCATASTRSRWLSLS
Nucleotide Sequence CTGCGCCCGCACCCTGGCTCTGCAGATGGGGAAACTGAGGCGCACAGGGGCACGACTGCTATGTCCCAAGACCCTGATGCCAGCAGGGGAAACACCTGGCGCGGCTCCTACTGGGAGTGCTCACCCAGGATGTGTGCCACGGCCTCCACCAGGTCCCGCTGGCTGTCCCTGTCC

CircID chr17:82081276|82081650
ORF Type ORF2
Protein Length 121
Nucleotide Length 363
Protein Sequence MSESRPRSASELSRLTAAKSRMPGRDAPGRQLQRGHGDGLYAAGLTPRGAWAVHLPKHHHHSDTCARTLALQMGKLRRTGARLLCPKTLMPAGETPGAAPTGSAHPGCVPRPPPGPAGCPC
Nucleotide Sequence ATGAGCGAGTCCAGGCCCAGGTCCGCCAGTGAGCTGTCCAGGTTGACAGCAGCCAAGTCGCGGATGCCTGGAAGGGATGCGCCGGGTCGGCAACTCCAGAGGGGGCATGGGGACGGCCTGTATGCGGCAGGGCTGACACCCAGGGGTGCGTGGGCTGTGCATCTCCCAAAGCACCACCACCACAGTGACACCTGCGCCCGCACCCTGGCTCTGCAGATGGGGAAACTGAGGCGCACAGGGGCACGACTGCTATGTCCCAAGACCCTGATGCCAGCAGGGGAAACACCTGGCGCGGCTCCTACTGGGAGTGCTCACCCAGGATGTGTGCCACGGCCTCCACCAGGTCCCGCTGGCTGTCCCTGT

CircID chr17:82081276|82081650
ORF Type ORF3
Protein Length 26
Nucleotide Length 78
Protein Sequence MARLLLGVLTQDVCHGLHQVPLAVPV
Nucleotide Sequence CTGGCGCGGCTCCTACTGGGAGTGCTCACCCAGGATGTGTGCCACGGCCTCCACCAGGTCCCGCTGGCTGTCCCTGTC

CircID chr17:82081276|82081650
ORF Type ORF4
Protein Length 90
Nucleotide Length 270
Protein Sequence MGHSSRAPVRLSFPICRARVRAQVSLWWWCFGRCTAHAPLGVSPAAYRPSPCPLWSCRPGASLPGIRDLAAVNLDSSLADLGLDSLMSVE
Nucleotide Sequence TTGGGACATAGCAGTCGTGCCCCTGTGCGCCTCAGTTTCCCCATCTGCAGAGCCAGGGTGCGGGCGCAGGTGTCACTGTGGTGGTGGTGCTTTGGGAGATGCACAGCCCACGCACCCCTGGGTGTCAGCCCTGCCGCATACAGGCCGTCCCCATGCCCCCTCTGGAGTTGCCGACCCGGCGCATCCCTTCCAGGCATCCGCGACTTGGCTGCTGTCAACCTGGACAGCTCACTGGCGGACCTGGGCCTGGACTCGCTCATGAGCGTGGAG

CircID chr17:82081276|82081650
ORF Type ORF5
Protein Length 92
Nucleotide Length 279
Protein Sequence MLASGSWDIAVVPLCASVSPSAEPGCGRRCHCGGGALGDAQPTHPWVSALPHTGRPHAPSGVADPAHPFQASATWLLSTWTAHWRTWAWTRS
Nucleotide Sequence CTGCTGGCATCAGGGTCTTGGGACATAGCAGTCGTGCCCCTGTGCGCCTCAGTTTCCCCATCTGCAGAGCCAGGGTGCGGGCGCAGGTGTCACTGTGGTGGTGGTGCTTTGGGAGATGCACAGCCCACGCACCCCTGGGTGTCAGCCCTGCCGCATACAGGCCGTCCCCATGCCCCCTCTGGAGTTGCCGACCCGGCGCATCCCTTCCAGGCATCCGCGACTTGGCTGCTGTCAACCTGGACAGCTCACTGGCGGACCTGGGCCTGGACTCGCTCATGA

CircID chr17:82081276|82081650
ORF Type ORF6
Protein Length 75
Nucleotide Length 225
Protein Sequence MQSQGAGAGVTVVVVLWEMHSPRTPGCQPCRIQAVPMPPLELPTRRIPSRHPRLGCCQPGQLTGGPGPGLAHERG
Nucleotide Sequence CTGCAGAGCCAGGGTGCGGGCGCAGGTGTCACTGTGGTGGTGGTGCTTTGGGAGATGCACAGCCCACGCACCCCTGGGTGTCAGCCCTGCCGCATACAGGCCGTCCCCATGCCCCCTCTGGAGTTGCCGACCCGGCGCATCCCTTCCAGGCATCCGCGACTTGGCTGCTGTCAACCTGGACAGCTCACTGGCGGACCTGGGCCTGGACTCGCTCATGAGCGTGGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites