CircRNA Information

General Information
circRNA Basic Information
CircID chr17:82081719|82081881
Strand +
CircType exon
Host Gene ENSG00000169710.6;
Algorism CIRI2;
Sequence CTCCCCGCAGCTCTGCCCACCTGCCCCCTCCCCCACAGGCCTGGCCGTGCAGTGGGGCGCCATCGGCGACGTGGGCATTTTGGTGGAGACGATGAGCACCAACGACACGATCGTCAGTGGCACGCTGCCCCAGCGCATGGCGTCCTGCCTGGAGGTGCTGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:82081719|82081881 hsa-miR-187-5p 0 0 1
chr17:82081719|82081881 hsa-miR-187-3p 0 0 1
chr17:82081719|82081881 hsa-miR-558 0 0 1
chr17:82081719|82081881 hsa-miR-625-5p 0 0 1
chr17:82081719|82081881 hsa-miR-625-3p 0 0 1
chr17:82081719|82081881 hsa-miR-652-5p 0 0 1
chr17:82081719|82081881 hsa-miR-652-3p 0 0 1
chr17:82081719|82081881 hsa-miR-662 0 0 1
chr17:82081719|82081881 hsa-miR-541-5p 0 0 1
chr17:82081719|82081881 hsa-miR-541-3p 0 0 1
chr17:82081719|82081881 hsa-miR-744-5p 0 0 1
chr17:82081719|82081881 hsa-miR-744-3p 0 0 1
chr17:82081719|82081881 hsa-miR-940 0 1 1
chr17:82081719|82081881 hsa-miR-1181 0 0 1
chr17:82081719|82081881 hsa-miR-1227-5p 0 0 1
chr17:82081719|82081881 hsa-miR-1227-3p 0 0 1
chr17:82081719|82081881 hsa-miR-1286 0 0 1
chr17:82081719|82081881 hsa-miR-1275 0 1 1
chr17:82081719|82081881 hsa-miR-1306-5p 0 0 1
chr17:82081719|82081881 hsa-miR-1306-3p 0 0 1
chr17:82081719|82081881 hsa-miR-491-5p 0 0 1
chr17:82081719|82081881 hsa-miR-486-3p 0 0 1
chr17:82081719|82081881 hsa-miR-885-3p 0 0 1
chr17:82081719|82081881 hsa-miR-654-5p 0 0 1
chr17:82081719|82081881 hsa-miR-566 0 0 1
chr17:82081719|82081881 hsa-miR-338-3p 0 0 1
chr17:82081719|82081881 hsa-miR-365 0 0 1
chr17:82081719|82081881 hsa-miR-557 1 0 0
chr17:82081719|82081881 hsa-miR-612 0 1 0
chr17:82081719|82081881 hsa-miR-2861 1 0 0
chr17:82081719|82081881 hsa-miR-3665 0 1 0
chr17:82081719|82081881 hsa-miR-3907 1 0 0
chr17:82081719|82081881 hsa-miR-4479 1 0 0
chr17:82081719|82081881 hsa-miR-4514 0 1 0
chr17:82081719|82081881 hsa-miR-4673 1 1 0
chr17:82081719|82081881 hsa-miR-6860 0 1 0
chr17:82081719|82081881 hsa-miR-6720-5p 1 0 0
chr17:82081719|82081881 hsa-miR-6799-5p 1 0 0
chr17:82081719|82081881 hsa-miR-3663-3p 0 1 0
chr17:82081719|82081881 hsa-miR-4695-5p 1 0 0
chr17:82081719|82081881 hsa-miR-4755-3p 0 1 0
chr17:82081719|82081881 hsa-miR-6727-5p 1 0 0
chr17:82081719|82081881 hsa-miR-6721-5p 0 1 0
chr17:82081719|82081881 hsa-miR-181a-2-3p 0 1 0
chr17:82081719|82081881 hsa-miR-770-5p 0 1 0
chr17:82081719|82081881 hsa-miR-6796-5p 0 1 0
chr17:82081719|82081881 hsa-miR-6805-5p 0 1 0
chr17:82081719|82081881 hsa-miR-6735-3p 0 1 0
chr17:82081719|82081881 hsa-miR-1229-5p 0 1 0
chr17:82081719|82081881 hsa-miR-4640-5p 1 0 0
chr17:82081719|82081881 hsa-miR-6749-5p 1 1 0
chr17:82081719|82081881 hsa-miR-4758-3p 0 1 0
chr17:82081719|82081881 hsa-miR-1207-5p 1 1 0
chr17:82081719|82081881 hsa-miR-4763-3p 1 1 0
chr17:82081719|82081881 hsa-miR-6870-5p 0 1 0
chr17:82081719|82081881 hsa-miR-6756-5p 1 0 0
chr17:82081719|82081881 hsa-miR-6803-5p 1 0 0
chr17:82081719|82081881 hsa-miR-7111-5p 0 1 0
chr17:82081719|82081881 hsa-miR-4728-5p 0 1 0
chr17:82081719|82081881 hsa-miR-6836-5p 1 0 0
chr17:82081719|82081881 hsa-miR-328-5p 1 1 0
chr17:82081719|82081881 hsa-miR-4632-5p 0 1 0
chr17:82081719|82081881 hsa-miR-4685-5p 1 0 0
chr17:82081719|82081881 hsa-miR-6846-5p 1 0 0
chr17:82081719|82081881 hsa-miR-6883-5p 0 1 0
chr17:82081719|82081881 hsa-miR-324-3p 0 1 0
chr17:82081719|82081881 hsa-miR-6785-5p 0 1 0
chr17:82081719|82081881 hsa-miR-498-3p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:82081719|82081881
ORF Type ORF1
Protein Length 50
Nucleotide Length 150
Protein Sequence MPTCPLPHRPGRAVGRHRRRGHFGGDDEHQRHDRQWHAAPAHGVLPGGAG
Nucleotide Sequence CTGCCCACCTGCCCCCTCCCCCACAGGCCTGGCCGTGCAGTGGGGCGCCATCGGCGACGTGGGCATTTTGGTGGAGACGATGAGCACCAACGACACGATCGTCAGTGGCACGCTGCCCCAGCGCATGGCGTCCTGCCTGGAGGTGCTGGA

CircID chr17:82081719|82081881
ORF Type ORF2
Protein Length 41
Nucleotide Length 123
Protein Sequence MAVQWGAIGDVGILVETMSTNDTIVSGTLPQRMASCLEVLD
Nucleotide Sequence CTGGCCGTGCAGTGGGGCGCCATCGGCGACGTGGGCATTTTGGTGGAGACGATGAGCACCAACGACACGATCGTCAGTGGCACGCTGCCCCAGCGCATGGCGTCCTGCCTGGAGGTGCTGGAC

CircID chr17:82081719|82081881
ORF Type ORF3
Protein Length 44
Nucleotide Length 132
Protein Sequence MGQRATDDRVVGAHRLHQNAHVADGAPLHGQACGGGGRWAELRG
Nucleotide Sequence CTGGGGCAGCGTGCCACTGACGATCGTGTCGTTGGTGCTCATCGTCTCCACCAAAATGCCCACGTCGCCGATGGCGCCCCACTGCACGGCCAGGCCTGTGGGGGAGGGGGCAGGTGGGCAGAGCTGCGGGGA

CircID chr17:82081719|82081881
ORF Type ORF4
Protein Length 46
Nucleotide Length 138
Protein Sequence MRWGSVPLTIVSLVLIVSTKMPTSPMAPHCTARPVGEGAGGQSCGE
Nucleotide Sequence ATGCGCTGGGGCAGCGTGCCACTGACGATCGTGTCGTTGGTGCTCATCGTCTCCACCAAAATGCCCACGTCGCCGATGGCGCCCCACTGCACGGCCAGGCCTGTGGGGGAGGGGGCAGGTGGGCAGAGCTGCGGGGAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites