CircRNA Information

General Information
circRNA Basic Information
CircID chr17:82083010|82083230
Strand -
CircType exon
Host Gene ENSG00000169710.6;
Algorism CIRI2;
Sequence CAGCGATGATGTAGCTCTTGTGGGCCGGGCAGAAGGTCTTGGAGATGGCCGACATCAGCTTGGGTTTGGCCCCCTTCAGCACTGCCTCCGGCTCCTCCGCAAGCACCTGCGTCCAAGCAGCACCCACCGGCTCAGGCACTGCCTGGGGACCAGAGCCTGGGGTGCCCGAGGCGCCGGGACTCCTCCCCTCACCTGCACGACGACTTTGCCAATGTGCTTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:82083010|82083230 hsa-miR-34a-5p 0 0 1
chr17:82083010|82083230 hsa-miR-34a-3p 0 0 1
chr17:82083010|82083230 hsa-miR-182-5p 0 0 1
chr17:82083010|82083230 hsa-miR-182-3p 0 0 1
chr17:82083010|82083230 hsa-miR-221-5p 0 0 1
chr17:82083010|82083230 hsa-miR-221-3p 0 0 1
chr17:82083010|82083230 hsa-miR-222-5p 0 0 1
chr17:82083010|82083230 hsa-miR-222-3p 0 0 1
chr17:82083010|82083230 hsa-miR-335-5p 0 0 1
chr17:82083010|82083230 hsa-miR-335-3p 0 0 1
chr17:82083010|82083230 hsa-miR-449a 0 1 1
chr17:82083010|82083230 hsa-miR-484 0 1 1
chr17:82083010|82083230 hsa-miR-519e-5p 0 0 1
chr17:82083010|82083230 hsa-miR-519e-3p 0 0 1
chr17:82083010|82083230 hsa-miR-517-5p 0 0 1
chr17:82083010|82083230 hsa-miR-517a-3p 0 0 1
chr17:82083010|82083230 hsa-miR-517b-3p 0 0 1
chr17:82083010|82083230 hsa-miR-517c-3p 0 0 1
chr17:82083010|82083230 hsa-miR-636 0 0 1
chr17:82083010|82083230 hsa-miR-650 0 1 1
chr17:82083010|82083230 hsa-miR-449b-5p 0 0 1
chr17:82083010|82083230 hsa-miR-449b-3p 0 0 1
chr17:82083010|82083230 hsa-miR-657 0 0 1
chr17:82083010|82083230 hsa-miR-658 0 1 1
chr17:82083010|82083230 hsa-miR-765 0 1 1
chr17:82083010|82083230 hsa-miR-760 0 1 1
chr17:82083010|82083230 hsa-miR-1237-5p 0 0 1
chr17:82083010|82083230 hsa-miR-1237-3p 0 0 1
chr17:82083010|82083230 hsa-miR-1827 0 0 1
chr17:82083010|82083230 hsa-miR-125a-3p 1 1 1
chr17:82083010|82083230 hsa-miR-512-3p 0 0 1
chr17:82083010|82083230 hsa-miR-1289 0 1 1
chr17:82083010|82083230 hsa-miR-423-5p 0 0 1
chr17:82083010|82083230 hsa-miR-566 0 0 1
chr17:82083010|82083230 hsa-miR-324-3p 0 0 1
chr17:82083010|82083230 hsa-miR-515-3p 0 0 1
chr17:82083010|82083230 hsa-miR-34c-5p 0 1 1
chr17:82083010|82083230 hsa-miR-515-5p 0 0 1
chr17:82083010|82083230 hsa-miR-550 0 0 1
chr17:82083010|82083230 hsa-miR-1201 0 0 1
chr17:82083010|82083230 hsa-miR-499-3p 0 0 1
chr17:82083010|82083230 hsa-miR-3147 1 0 0
chr17:82083010|82083230 hsa-miR-3155a 0 1 0
chr17:82083010|82083230 hsa-miR-3612 0 1 0
chr17:82083010|82083230 hsa-miR-3665 1 1 0
chr17:82083010|82083230 hsa-miR-4440 1 0 0
chr17:82083010|82083230 hsa-miR-4449 0 1 0
chr17:82083010|82083230 hsa-miR-4466 1 0 0
chr17:82083010|82083230 hsa-miR-3155b 0 1 0
chr17:82083010|82083230 hsa-miR-4488 1 0 0
chr17:82083010|82083230 hsa-miR-4514 0 1 0
chr17:82083010|82083230 hsa-miR-4673 1 1 0
chr17:82083010|82083230 hsa-miR-4692 0 1 0
chr17:82083010|82083230 hsa-miR-4706 1 0 0
chr17:82083010|82083230 hsa-miR-4710 0 1 0
chr17:82083010|82083230 hsa-miR-4739 1 0 0
chr17:82083010|82083230 hsa-miR-6081 1 0 0
chr17:82083010|82083230 hsa-miR-8075 0 1 0
chr17:82083010|82083230 hsa-miR-128-1-5p 0 1 0
chr17:82083010|82083230 hsa-miR-6734-5p 0 1 0
chr17:82083010|82083230 hsa-miR-3926 0 1 0
chr17:82083010|82083230 hsa-miR-6089 1 0 0
chr17:82083010|82083230 hsa-miR-6741-5p 1 1 0
chr17:82083010|82083230 hsa-miR-3180-3p 1 0 0
chr17:82083010|82083230 hsa-miR-7855-5p 1 0 0
chr17:82083010|82083230 hsa-miR-615-5p 0 1 0
chr17:82083010|82083230 hsa-miR-6786-5p 1 1 0
chr17:82083010|82083230 hsa-miR-7109-5p 1 1 0
chr17:82083010|82083230 hsa-miR-6824-5p 1 0 0
chr17:82083010|82083230 hsa-miR-6864-5p 0 1 0
chr17:82083010|82083230 hsa-miR-7152-3p 0 1 0
chr17:82083010|82083230 hsa-miR-4707-5p 1 0 0
chr17:82083010|82083230 hsa-miR-1250-5p 0 1 0
chr17:82083010|82083230 hsa-miR-509-3p 1 0 0
chr17:82083010|82083230 hsa-miR-668-5p 0 1 0
chr17:82083010|82083230 hsa-miR-3179 0 1 0
chr17:82083010|82083230 hsa-miR-5587-3p 0 1 0
chr17:82083010|82083230 hsa-miR-431-3p 1 1 0
chr17:82083010|82083230 hsa-miR-1233-5p 1 0 0
chr17:82083010|82083230 hsa-miR-4763-3p 1 0 0
chr17:82083010|82083230 hsa-miR-6769b-5p 1 0 0
chr17:82083010|82083230 hsa-miR-1343-5p 1 0 0
chr17:82083010|82083230 hsa-miR-6769a-5p 1 0 0
chr17:82083010|82083230 hsa-miR-6803-5p 1 0 0
chr17:82083010|82083230 hsa-miR-11181-3p 0 1 0
chr17:82083010|82083230 hsa-miR-1249-5p 1 0 0
chr17:82083010|82083230 hsa-miR-6751-5p 1 0 0
chr17:82083010|82083230 hsa-miR-7111-5p 1 0 0
chr17:82083010|82083230 hsa-miR-449c-5p 0 1 0
chr17:82083010|82083230 hsa-miR-4649-5p 1 0 0
chr17:82083010|82083230 hsa-miR-6845-5p 0 1 0
chr17:82083010|82083230 hsa-miR-939-5p 1 1 0
chr17:82083010|82083230 hsa-miR-34b-5p 0 1 0
chr17:82083010|82083230 hsa-miR-1914-3p 1 0 0
chr17:82083010|82083230 hsa-miR-550a-3-5p 0 1 0
chr17:82083010|82083230 hsa-miR-550a-5p 0 1 0
chr17:82083010|82083230 hsa-miR-6762-5p 0 1 0
chr17:82083010|82083230 hsa-miR-10394-5p 1 0 0
chr17:82083010|82083230 hsa-miR-33b-3p 0 1 0
chr17:82083010|82083230 hsa-miR-2682-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:82083010|82083230
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence MPPAPPQAPASKQHPPAQALPGDQSLGCPRRRDSSPHLHDDFANVL
Nucleotide Sequence CTGCCTCCGGCTCCTCCGCAAGCACCTGCGTCCAAGCAGCACCCACCGGCTCAGGCACTGCCTGGGGACCAGAGCCTGGGGTGCCCGAGGCGCCGGGACTCCTCCCCTCACCTGCACGACGACTTTGCCAATGTGCTT
CircID chr17:82083010|82083230
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MRPSSTHRLRHCLGTRAWGARGAGTPPLTCTTTLPMCF
Nucleotide Sequence CTGCGTCCAAGCAGCACCCACCGGCTCAGGCACTGCCTGGGGACCAGAGCCTGGGGTGCCCGAGGCGCCGGGACTCCTCCCCTCACCTGCACGACGACTTTGCCAATGTGCTTC
CircID chr17:82083010|82083230
ORF Type ORF3
Protein Length 68
Nucleotide Length 204
Protein Sequence MWAGQKVLEMADISLGLAPFSTASGSSASTCVQAAPTGSGTAWGPEPGVPEAPGLLPSPARRLCQCAS
Nucleotide Sequence TTGTGGGCCGGGCAGAAGGTCTTGGAGATGGCCGACATCAGCTTGGGTTTGGCCCCCTTCAGCACTGCCTCCGGCTCCTCCGCAAGCACCTGCGTCCAAGCAGCACCCACCGGCTCAGGCACTGCCTGGGGACCAGAGCCTGGGGTGCCCGAGGCGCCGGGACTCCTCCCCTCACCTGCACGACGACTTTGCCAATGTGCTTCC
CircID chr17:82083010|82083230
ORF Type ORF4
Protein Length 38
Nucleotide Length 114
Protein Sequence MDAGACGGAGGSAEGGQTQADVGHLQDLLPGPQELHHR
Nucleotide Sequence TTGGACGCAGGTGCTTGCGGAGGAGCCGGAGGCAGTGCTGAAGGGGGCCAAACCCAAGCTGATGTCGGCCATCTCCAAGACCTTCTGCCCGGCCCACAAGAGCTACATCATCGC
CircID chr17:82083010|82083230
ORF Type ORF5
Protein Length 26
Nucleotide Length 78
Protein Sequence MKGAKPKLMSAISKTFCPAHKSYIIA
Nucleotide Sequence CTGAAGGGGGCCAAACCCAAGCTGATGTCGGCCATCTCCAAGACCTTCTGCCCGGCCCACAAGAGCTACATCATCGCT
CircID chr17:82083010|82083230
ORF Type ORF6
Protein Length 25
Nucleotide Length 78
Protein Sequence MVPRQCLSRWVLLGRRCLRRSRRQC
Nucleotide Sequence CTGGTCCCCAGGCAGTGCCTGAGCCGGTGGGTGCTGCTTGGACGCAGGTGCTTGCGGAGGAGCCGGAGGCAGTGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab