CircRNA Information

General Information
circRNA Basic Information
CircID chr17:82084908|82085111
Strand -
CircType exon
Host Gene ENSG00000169710.6;
Algorism CIRI2;
Sequence CTCCGGGACGTGGGAGGTGCTGCTGAGGTTGGAGAGCAGCACACACCTGGGGGCAGAGGCGGGGAGCTCAGGCTGGGGATGGGGAGGCTGGTGGGGAAGGGGAAGTGGTGAGGGGCCGTGCTCCTACCGGAGGCGGTTCCCGCCGGGCTCTCGGCGGAGACAGTTCACCAAGCCCACCACGCCCGAGGTGGCACAGTTGATGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:82084908|82085111 hsa-miR-15a-5p 0 0 1
chr17:82084908|82085111 hsa-miR-15a-3p 0 0 1
chr17:82084908|82085111 hsa-miR-197-5p 0 0 1
chr17:82084908|82085111 hsa-miR-197-3p 0 0 1
chr17:82084908|82085111 hsa-miR-214-5p 0 0 1
chr17:82084908|82085111 hsa-miR-214-3p 0 0 1
chr17:82084908|82085111 hsa-miR-15b-5p 0 0 1
chr17:82084908|82085111 hsa-miR-15b-3p 0 0 1
chr17:82084908|82085111 hsa-miR-195-5p 0 0 1
chr17:82084908|82085111 hsa-miR-195-3p 0 0 1
chr17:82084908|82085111 hsa-miR-424-5p 0 0 1
chr17:82084908|82085111 hsa-miR-424-3p 0 0 1
chr17:82084908|82085111 hsa-miR-497-5p 0 0 1
chr17:82084908|82085111 hsa-miR-497-3p 0 0 1
chr17:82084908|82085111 hsa-miR-662 0 0 1
chr17:82084908|82085111 hsa-miR-541-5p 0 0 1
chr17:82084908|82085111 hsa-miR-541-3p 0 0 1
chr17:82084908|82085111 hsa-miR-708-5p 0 0 1
chr17:82084908|82085111 hsa-miR-708-3p 0 0 1
chr17:82084908|82085111 hsa-miR-922 0 0 1
chr17:82084908|82085111 hsa-miR-1226-5p 0 0 1
chr17:82084908|82085111 hsa-miR-1226-3p 0 0 1
chr17:82084908|82085111 hsa-miR-1227-5p 0 0 1
chr17:82084908|82085111 hsa-miR-1227-3p 0 0 1
chr17:82084908|82085111 hsa-miR-1281 0 0 1
chr17:82084908|82085111 hsa-miR-532-3p 0 0 1
chr17:82084908|82085111 hsa-miR-654-5p 0 1 1
chr17:82084908|82085111 hsa-miR-361-3p 0 1 1
chr17:82084908|82085111 hsa-miR-28-5p 0 0 1
chr17:82084908|82085111 hsa-miR-324-3p 1 0 1
chr17:82084908|82085111 hsa-miR-515-5p 0 1 1
chr17:82084908|82085111 hsa-miR-220b 0 0 1
chr17:82084908|82085111 hsa-miR-16 0 0 1
chr17:82084908|82085111 hsa-miR-1268 0 0 1
chr17:82084908|82085111 hsa-miR-346 1 0 0
chr17:82084908|82085111 hsa-miR-596 1 0 0
chr17:82084908|82085111 hsa-miR-623 1 0 0
chr17:82084908|82085111 hsa-miR-634 1 0 0
chr17:82084908|82085111 hsa-miR-661 1 1 0
chr17:82084908|82085111 hsa-miR-1200 1 0 0
chr17:82084908|82085111 hsa-miR-1268a 0 1 0
chr17:82084908|82085111 hsa-miR-1470 1 0 0
chr17:82084908|82085111 hsa-miR-1913 1 1 0
chr17:82084908|82085111 hsa-miR-1976 1 0 0
chr17:82084908|82085111 hsa-miR-4268 1 0 0
chr17:82084908|82085111 hsa-miR-3943 1 0 0
chr17:82084908|82085111 hsa-miR-1268b 0 1 0
chr17:82084908|82085111 hsa-miR-3972 1 0 0
chr17:82084908|82085111 hsa-miR-4682 1 0 0
chr17:82084908|82085111 hsa-miR-5193 1 0 0
chr17:82084908|82085111 hsa-miR-6749-3p 1 0 0
chr17:82084908|82085111 hsa-miR-4726-3p 1 0 0
chr17:82084908|82085111 hsa-miR-6836-3p 1 0 0
chr17:82084908|82085111 hsa-miR-6720-5p 1 0 0
chr17:82084908|82085111 hsa-miR-766-3p 1 1 0
chr17:82084908|82085111 hsa-miR-6892-3p 1 0 0
chr17:82084908|82085111 hsa-miR-6881-3p 1 0 0
chr17:82084908|82085111 hsa-miR-3189-5p 1 0 0
chr17:82084908|82085111 hsa-miR-6849-3p 1 1 0
chr17:82084908|82085111 hsa-miR-1915-5p 1 0 0
chr17:82084908|82085111 hsa-miR-6845-3p 1 0 0
chr17:82084908|82085111 hsa-miR-6796-3p 1 0 0
chr17:82084908|82085111 hsa-miR-877-3p 1 0 0
chr17:82084908|82085111 hsa-miR-6735-3p 1 0 0
chr17:82084908|82085111 hsa-miR-6788-3p 1 1 0
chr17:82084908|82085111 hsa-miR-6858-3p 1 0 0
chr17:82084908|82085111 hsa-miR-4713-5p 1 0 0
chr17:82084908|82085111 hsa-miR-615-3p 1 0 0
chr17:82084908|82085111 hsa-miR-4436b-5p 1 0 0
chr17:82084908|82085111 hsa-miR-6884-3p 1 0 0
chr17:82084908|82085111 hsa-miR-939-3p 1 0 0
chr17:82084908|82085111 hsa-miR-4763-5p 1 0 0
chr17:82084908|82085111 hsa-miR-6763-3p 1 1 0
chr17:82084908|82085111 hsa-miR-7108-3p 1 0 0
chr17:82084908|82085111 hsa-miR-1247-5p 1 0 0
chr17:82084908|82085111 hsa-miR-1908-3p 1 0 0
chr17:82084908|82085111 hsa-miR-6803-3p 1 0 0
chr17:82084908|82085111 hsa-miR-7113-3p 1 0 0
chr17:82084908|82085111 hsa-miR-3679-3p 1 0 0
chr17:82084908|82085111 hsa-miR-3667-3p 1 0 0
chr17:82084908|82085111 hsa-miR-5196-3p 1 0 0
chr17:82084908|82085111 hsa-miR-6769a-3p 1 0 0
chr17:82084908|82085111 hsa-miR-339-5p 1 0 0
chr17:82084908|82085111 hsa-miR-3189-3p 0 1 0
chr17:82084908|82085111 hsa-miR-6870-3p 1 0 0
chr17:82084908|82085111 hsa-miR-211-5p 1 0 0
chr17:82084908|82085111 hsa-miR-4707-5p 1 0 0
chr17:82084908|82085111 hsa-miR-1237-3p 1 0 0
chr17:82084908|82085111 hsa-miR-1236-3p 1 1 0
chr17:82084908|82085111 hsa-miR-7106-3p 1 1 0
chr17:82084908|82085111 hsa-miR-6785-3p 1 0 0
chr17:82084908|82085111 hsa-miR-4758-3p 1 0 0
chr17:82084908|82085111 hsa-miR-6887-3p 1 0 0
chr17:82084908|82085111 hsa-miR-6793-3p 1 0 0
chr17:82084908|82085111 hsa-miR-1224-3p 1 0 0
chr17:82084908|82085111 hsa-miR-4750-5p 0 1 0
chr17:82084908|82085111 hsa-miR-6752-3p 1 0 0
chr17:82084908|82085111 hsa-miR-1296-5p 1 0 0
chr17:82084908|82085111 hsa-miR-6826-3p 1 0 0
chr17:82084908|82085111 hsa-miR-5088-3p 1 0 0
chr17:82084908|82085111 hsa-miR-4749-3p 1 1 0
chr17:82084908|82085111 hsa-miR-6795-3p 0 1 0
chr17:82084908|82085111 hsa-miR-6777-3p 1 0 0
chr17:82084908|82085111 hsa-miR-2277-5p 1 0 0
chr17:82084908|82085111 hsa-miR-6760-3p 1 0 0
chr17:82084908|82085111 hsa-miR-6883-3p 1 0 0
chr17:82084908|82085111 hsa-miR-6748-3p 1 0 0
chr17:82084908|82085111 hsa-miR-1255b-2-3p 0 1 0
chr17:82084908|82085111 hsa-miR-6851-3p 1 0 0
chr17:82084908|82085111 hsa-miR-4433a-5p 1 0 0
chr17:82084908|82085111 hsa-miR-1229-3p 1 1 0
chr17:82084908|82085111 hsa-miR-4433b-5p 1 0 0
chr17:82084908|82085111 hsa-miR-6734-3p 1 1 0
chr17:82084908|82085111 hsa-miR-1249-3p 1 0 0
chr17:82084908|82085111 hsa-miR-6729-3p 1 1 0
chr17:82084908|82085111 hsa-miR-676-5p 0 1 0
chr17:82084908|82085111 hsa-miR-6780b-3p 1 0 0
chr17:82084908|82085111 hsa-miR-3162-3p 1 0 0
chr17:82084908|82085111 hsa-miR-6731-3p 1 0 0
chr17:82084908|82085111 hsa-miR-212-3p 1 0 0
chr17:82084908|82085111 hsa-miR-3127-3p 1 1 0
chr17:82084908|82085111 hsa-miR-320a-5p 1 0 0
chr17:82084908|82085111 hsa-miR-4685-3p 1 0 0
chr17:82084908|82085111 hsa-miR-4755-5p 1 0 0
chr17:82084908|82085111 hsa-miR-6754-3p 1 0 0
chr17:82084908|82085111 hsa-miR-5008-3p 1 0 0
chr17:82084908|82085111 hsa-miR-6791-3p 1 0 0
chr17:82084908|82085111 hsa-miR-6877-3p 1 1 0
chr17:82084908|82085111 hsa-miR-2682-3p 1 0 0
chr17:82084908|82085111 hsa-miR-6511a-3p 1 1 0
chr17:82084908|82085111 hsa-miR-6756-3p 1 1 0
chr17:82084908|82085111 hsa-miR-6784-3p 1 0 0
chr17:82084908|82085111 hsa-miR-6792-3p 1 0 0
chr17:82084908|82085111 hsa-miR-6862-3p 1 0 0
chr17:82084908|82085111 hsa-miR-10401-3p 1 0 0
chr17:82084908|82085111 hsa-miR-6801-3p 1 0 0
chr17:82084908|82085111 hsa-miR-10392-3p 1 1 0
chr17:82084908|82085111 hsa-miR-3059-5p 1 0 0
chr17:82084908|82085111 hsa-miR-6511b-3p 1 1 0
chr17:82084908|82085111 hsa-miR-6751-3p 1 0 0
chr17:82084908|82085111 hsa-miR-6819-3p 1 1 0
chr17:82084908|82085111 hsa-miR-6891-3p 1 1 0
chr17:82084908|82085111 hsa-miR-6783-3p 1 0 0
chr17:82084908|82085111 hsa-miR-1234-3p 1 0 0
chr17:82084908|82085111 hsa-miR-5006-3p 1 1 0
chr17:82084908|82085111 hsa-miR-6797-3p 1 0 0
chr17:82084908|82085111 hsa-miR-412-3p 1 0 0
chr17:82084908|82085111 hsa-miR-519e-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:82084908|82085111
ORF Type ORF1
Protein Length 61
Nucleotide Length 183
Protein Sequence MLRLESSTHLGAEAGSSGWGWGGWWGRGSGEGPCSYRRRFPPGSRRRQFTKPTTPEVAQLM
Nucleotide Sequence CTGCTGAGGTTGGAGAGCAGCACACACCTGGGGGCAGAGGCGGGGAGCTCAGGCTGGGGATGGGGAGGCTGGTGGGGAAGGGGAAGTGGTGAGGGGCCGTGCTCCTACCGGAGGCGGTTCCCGCCGGGCTCTCGGCGGAGACAGTTCACCAAGCCCACCACGCCCGAGGTGGCACAGTTGATG
CircID chr17:82084908|82085111
ORF Type ORF2
Protein Length 42
Nucleotide Length 129
Protein Sequence MCHLGRGGLGELSPPRARREPPPVGARPLTTSPSPPASPSPA
Nucleotide Sequence CTGTGCCACCTCGGGCGTGGTGGGCTTGGTGAACTGTCTCCGCCGAGAGCCCGGCGGGAACCGCCTCCGGTAGGAGCACGGCCCCTCACCACTTCCCCTTCCCCACCAGCCTCCCCATCCCCAGCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab