CircRNA Information

General Information
circRNA Basic Information
CircID chr17:82088769|82089128
Strand +
CircType exon
Host Gene ENSG00000169710.6;
Algorism CIRI2;
Sequence CTCTATCCCCGAGGCCCAGTGGCACAGCAGCCTGGCACGCACGTCCTCCGCCGAGTACAATGTCAACAACCTGGTGAGCCCTGTGCTGTTCCAGGAGGCCCTGTGGCACGTGCCTGAGCACGCGGTGGTGCTGGAGATCGCGCCCCACGCCCTGCTGCAGGTAGGCCCAGCCTGGGGGCAGCAGGCGCCGGGAGCCTGGGATGGGCGCCTCAGCTGAGCACCAAGAGAGCCCACCTGCCCTGCCGCCCCCAGGCTGTCCTGAAGCGTGGCCTGAAGCCGAGCTGCACCATCATCCCCCTGATGAAGAAGGATCACAGGGACAACCTGGAGTTCTTCCTGGCCGGCATCGGCAGGCTGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:82088769|82089128 hsa-miR-29a-5p 0 0 1
chr17:82088769|82089128 hsa-miR-29a-3p 0 0 1
chr17:82088769|82089128 hsa-miR-107 0 0 1
chr17:82088769|82089128 hsa-miR-214-5p 0 0 1
chr17:82088769|82089128 hsa-miR-214-3p 0 0 1
chr17:82088769|82089128 hsa-miR-29c-5p 0 0 1
chr17:82088769|82089128 hsa-miR-29c-3p 0 0 1
chr17:82088769|82089128 hsa-miR-370-5p 0 0 1
chr17:82088769|82089128 hsa-miR-370-3p 0 0 1
chr17:82088769|82089128 hsa-miR-484 0 1 1
chr17:82088769|82089128 hsa-miR-489-5p 0 0 1
chr17:82088769|82089128 hsa-miR-489-3p 0 0 1
chr17:82088769|82089128 hsa-miR-596 0 0 1
chr17:82088769|82089128 hsa-miR-637 0 1 1
chr17:82088769|82089128 hsa-miR-661 0 0 1
chr17:82088769|82089128 hsa-miR-653-5p 0 0 1
chr17:82088769|82089128 hsa-miR-653-3p 0 0 1
chr17:82088769|82089128 hsa-miR-658 0 1 1
chr17:82088769|82089128 hsa-miR-1301-5p 0 0 1
chr17:82088769|82089128 hsa-miR-1301-3p 0 0 1
chr17:82088769|82089128 hsa-miR-766-5p 0 0 1
chr17:82088769|82089128 hsa-miR-766-3p 0 0 1
chr17:82088769|82089128 hsa-miR-541-5p 0 0 1
chr17:82088769|82089128 hsa-miR-541-3p 0 0 1
chr17:82088769|82089128 hsa-miR-1226-5p 0 0 1
chr17:82088769|82089128 hsa-miR-1226-3p 0 0 1
chr17:82088769|82089128 hsa-miR-1227-5p 0 0 1
chr17:82088769|82089128 hsa-miR-1227-3p 0 0 1
chr17:82088769|82089128 hsa-miR-1237-5p 0 0 1
chr17:82088769|82089128 hsa-miR-1237-3p 0 0 1
chr17:82088769|82089128 hsa-miR-1248 0 0 1
chr17:82088769|82089128 hsa-miR-1307-5p 0 0 1
chr17:82088769|82089128 hsa-miR-1307-3p 0 0 1
chr17:82088769|82089128 hsa-miR-542-5p 0 0 1
chr17:82088769|82089128 hsa-miR-339-5p 0 0 1
chr17:82088769|82089128 hsa-miR-1184 0 0 1
chr17:82088769|82089128 hsa-miR-654-5p 0 0 1
chr17:82088769|82089128 hsa-miR-566 0 0 1
chr17:82088769|82089128 hsa-miR-508-5p 0 0 1
chr17:82088769|82089128 hsa-miR-361-3p 0 1 1
chr17:82088769|82089128 hsa-miR-1207-3p 0 0 1
chr17:82088769|82089128 hsa-miR-338-3p 0 0 1
chr17:82088769|82089128 hsa-miR-1207-5p 0 1 1
chr17:82088769|82089128 hsa-miR-324-3p 0 0 1
chr17:82088769|82089128 hsa-miR-220b 0 0 1
chr17:82088769|82089128 hsa-miR-1274a 0 0 1
chr17:82088769|82089128 hsa-miR-103 0 0 1
chr17:82088769|82089128 hsa-miR-1274b 0 0 1
chr17:82088769|82089128 hsa-miR-220c 0 0 1
chr17:82088769|82089128 hsa-miR-1268 0 0 1
chr17:82088769|82089128 hsa-miR-453 0 0 1
chr17:82088769|82089128 hsa-miR-29b 0 0 1
chr17:82088769|82089128 hsa-miR-618 0 1 0
chr17:82088769|82089128 hsa-miR-622 0 1 0
chr17:82088769|82089128 hsa-miR-638 1 0 0
chr17:82088769|82089128 hsa-miR-645 0 1 0
chr17:82088769|82089128 hsa-miR-663a 1 0 0
chr17:82088769|82089128 hsa-miR-761 0 1 0
chr17:82088769|82089128 hsa-miR-1268a 0 1 0
chr17:82088769|82089128 hsa-miR-1469 1 0 0
chr17:82088769|82089128 hsa-miR-1913 0 1 0
chr17:82088769|82089128 hsa-miR-3196 0 1 0
chr17:82088769|82089128 hsa-miR-3937 1 0 0
chr17:82088769|82089128 hsa-miR-1268b 0 1 0
chr17:82088769|82089128 hsa-miR-4436a 0 1 0
chr17:82088769|82089128 hsa-miR-4512 0 1 0
chr17:82088769|82089128 hsa-miR-4525 1 1 0
chr17:82088769|82089128 hsa-miR-3960 0 1 0
chr17:82088769|82089128 hsa-miR-4721 1 0 0
chr17:82088769|82089128 hsa-miR-5047 0 1 0
chr17:82088769|82089128 hsa-miR-5698 1 0 0
chr17:82088769|82089128 hsa-miR-6132 0 1 0
chr17:82088769|82089128 hsa-miR-8072 0 1 0
chr17:82088769|82089128 hsa-miR-4726-3p 0 1 0
chr17:82088769|82089128 hsa-miR-6861-5p 1 0 0
chr17:82088769|82089128 hsa-miR-6894-5p 1 1 0
chr17:82088769|82089128 hsa-miR-1972 1 1 0
chr17:82088769|82089128 hsa-miR-27a-5p 0 1 0
chr17:82088769|82089128 hsa-miR-25-5p 0 1 0
chr17:82088769|82089128 hsa-miR-3622a-5p 0 1 0
chr17:82088769|82089128 hsa-miR-4722-5p 1 0 0
chr17:82088769|82089128 hsa-miR-4755-3p 0 1 0
chr17:82088769|82089128 hsa-miR-6820-5p 0 1 0
chr17:82088769|82089128 hsa-miR-6840-5p 0 1 0
chr17:82088769|82089128 hsa-miR-6762-3p 0 1 0
chr17:82088769|82089128 hsa-miR-6727-5p 1 0 0
chr17:82088769|82089128 hsa-miR-6721-5p 0 1 0
chr17:82088769|82089128 hsa-miR-770-5p 1 1 0
chr17:82088769|82089128 hsa-miR-6787-3p 0 1 0
chr17:82088769|82089128 hsa-miR-6742-5p 1 0 0
chr17:82088769|82089128 hsa-miR-423-3p 1 1 0
chr17:82088769|82089128 hsa-miR-6793-5p 1 0 0
chr17:82088769|82089128 hsa-miR-6732-5p 1 0 0
chr17:82088769|82089128 hsa-miR-6798-5p 1 1 0
chr17:82088769|82089128 hsa-miR-3934-3p 0 1 0
chr17:82088769|82089128 hsa-miR-6852-5p 0 1 0
chr17:82088769|82089128 hsa-miR-5088-5p 1 1 0
chr17:82088769|82089128 hsa-miR-4763-5p 0 1 0
chr17:82088769|82089128 hsa-miR-3691-5p 1 0 0
chr17:82088769|82089128 hsa-miR-1228-5p 0 1 0
chr17:82088769|82089128 hsa-miR-4783-5p 1 0 0
chr17:82088769|82089128 hsa-miR-3648 1 0 0
chr17:82088769|82089128 hsa-miR-4787-5p 1 0 0
chr17:82088769|82089128 hsa-miR-4733-3p 0 1 0
chr17:82088769|82089128 hsa-miR-146b-3p 0 1 0
chr17:82088769|82089128 hsa-miR-5010-5p 0 1 0
chr17:82088769|82089128 hsa-miR-4646-3p 0 1 0
chr17:82088769|82089128 hsa-miR-3191-3p 0 1 0
chr17:82088769|82089128 hsa-miR-4638-5p 0 1 0
chr17:82088769|82089128 hsa-miR-6720-3p 0 1 0
chr17:82088769|82089128 hsa-miR-3944-5p 0 1 0
chr17:82088769|82089128 hsa-miR-597-3p 1 1 0
chr17:82088769|82089128 hsa-miR-1295b-3p 1 0 0
chr17:82088769|82089128 hsa-miR-4649-3p 0 1 0
chr17:82088769|82089128 hsa-miR-6789-3p 0 1 0
chr17:82088769|82089128 hsa-miR-29b-3p 0 1 0
chr17:82088769|82089128 hsa-miR-10400-5p 1 0 0
chr17:82088769|82089128 hsa-miR-4763-3p 1 1 0
chr17:82088769|82089128 hsa-miR-6787-5p 1 0 0
chr17:82088769|82089128 hsa-miR-6816-5p 0 1 0
chr17:82088769|82089128 hsa-miR-6752-5p 1 0 0
chr17:82088769|82089128 hsa-miR-6756-5p 1 0 0
chr17:82088769|82089128 hsa-miR-6769a-5p 1 0 0
chr17:82088769|82089128 hsa-miR-6803-5p 1 1 0
chr17:82088769|82089128 hsa-miR-6722-3p 1 0 0
chr17:82088769|82089128 hsa-miR-6808-5p 0 1 0
chr17:82088769|82089128 hsa-miR-7111-5p 1 0 0
chr17:82088769|82089128 hsa-miR-3620-5p 1 0 0
chr17:82088769|82089128 hsa-miR-6836-5p 0 1 0
chr17:82088769|82089128 hsa-miR-10396b-5p 1 0 0
chr17:82088769|82089128 hsa-miR-328-5p 1 0 0
chr17:82088769|82089128 hsa-miR-4632-5p 1 1 0
chr17:82088769|82089128 hsa-miR-4649-5p 1 0 0
chr17:82088769|82089128 hsa-miR-4685-5p 0 1 0
chr17:82088769|82089128 hsa-miR-6735-5p 0 1 0
chr17:82088769|82089128 hsa-miR-6794-5p 1 1 0
chr17:82088769|82089128 hsa-miR-6795-5p 1 0 0
chr17:82088769|82089128 hsa-miR-6848-5p 1 0 0
chr17:82088769|82089128 hsa-miR-6887-5p 1 0 0
chr17:82088769|82089128 hsa-miR-4697-5p 0 1 0
chr17:82088769|82089128 hsa-miR-5008-3p 1 0 0
chr17:82088769|82089128 hsa-miR-7843-5p 0 1 0
chr17:82088769|82089128 hsa-miR-3116 0 1 0
chr17:82088769|82089128 hsa-miR-6724-5p 1 0 0
chr17:82088769|82089128 hsa-miR-6893-3p 0 1 0
chr17:82088769|82089128 hsa-miR-6805-3p 1 0 0
chr17:82088769|82089128 hsa-miR-323b-5p 0 1 0
chr17:82088769|82089128 hsa-miR-3619-5p 0 1 0
chr17:82088769|82089128 hsa-miR-494-5p 0 1 0
chr17:82088769|82089128 hsa-miR-410-5p 0 1 0
chr17:82088769|82089128 hsa-miR-7157-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:82088769|82089128
ORF Type ORF1
Protein Length 63
Nucleotide Length 189
Protein Sequence MGAAGAGSLGWAPQLSTKRAHLPCRPQAVLKRGLKPSCTIIPLMKKDHRDNLEFFLAGIGRLH
Nucleotide Sequence CTGGGGGCAGCAGGCGCCGGGAGCCTGGGATGGGCGCCTCAGCTGAGCACCAAGAGAGCCCACCTGCCCTGCCGCCCCCAGGCTGTCCTGAAGCGTGGCCTGAAGCCGAGCTGCACCATCATCCCCCTGATGAAGAAGGATCACAGGGACAACCTGGAGTTCTTCCTGGCCGGCATCGGCAGGCTGCAC
CircID chr17:82088769|82089128
ORF Type ORF2
Protein Length 61
Nucleotide Length 186
Protein Sequence MARTSSAEYNVNNLVSPVLFQEALWHVPEHAVVLEIAPHALLQVGPAWGQQAPGAWDGRLS
Nucleotide Sequence CTGGCACGCACGTCCTCCGCCGAGTACAATGTCAACAACCTGGTGAGCCCTGTGCTGTTCCAGGAGGCCCTGTGGCACGTGCCTGAGCACGCGGTGGTGCTGGAGATCGCGCCCCACGCCCTGCTGCAGGTAGGCCCAGCCTGGGGGCAGCAGGCGCCGGGAGCCTGGGATGGGCGCCTCAGCTGA
CircID chr17:82088769|82089128
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MCCSRRPCGTCLSTRWCWRSRPTPCCR
Nucleotide Sequence CTGTGCTGTTCCAGGAGGCCCTGTGGCACGTGCCTGAGCACGCGGTGGTGCTGGAGATCGCGCCCCACGCCCTGCTGCAGGTAG
CircID chr17:82088769|82089128
ORF Type ORF4
Protein Length 53
Nucleotide Length 159
Protein Sequence MGASAEHQESPPALPPPGCPEAWPEAELHHHPPDEEGSQGQPGVLPGRHRQAA
Nucleotide Sequence ATGGGCGCCTCAGCTGAGCACCAAGAGAGCCCACCTGCCCTGCCGCCCCCAGGCTGTCCTGAAGCGTGGCCTGAAGCCGAGCTGCACCATCATCCCCCTGATGAAGAAGGATCACAGGGACAACCTGGAGTTCTTCCTGGCCGGCATCGGCAGGCTGCA
CircID chr17:82088769|82089128
ORF Type ORF5
Protein Length 84
Nucleotide Length 252
Protein Sequence MGAAGQVGSLGAQLRRPSQAPGACCPQAGPTCSRAWGAISSTTACSGTCHRASWNSTGLTRLLTLYSAEDVRARLLCHWASGIE
Nucleotide Sequence CTGGGGGCGGCAGGGCAGGTGGGCTCTCTTGGTGCTCAGCTGAGGCGCCCATCCCAGGCTCCCGGCGCCTGCTGCCCCCAGGCTGGGCCTACCTGCAGCAGGGCGTGGGGCGCGATCTCCAGCACCACCGCGTGCTCAGGCACGTGCCACAGGGCCTCCTGGAACAGCACAGGGCTCACCAGGTTGTTGACATTGTACTCGGCGGAGGACGTGCGTGCCAGGCTGCTGTGCCACTGGGCCTCGGGGATAGAG
CircID chr17:82088769|82089128
ORF Type ORF6
Protein Length 27
Nucleotide Length 84
Protein Sequence MMVQLGFRPRFRTAWGRQGRWALLVLS
Nucleotide Sequence ATGATGGTGCAGCTCGGCTTCAGGCCACGCTTCAGGACAGCCTGGGGGCGGCAGGGCAGGTGGGCTCTCTTGGTGCTCAGCTGA
CircID chr17:82088769|82089128
ORF Type ORF7
Protein Length 35
Nucleotide Length 108
Protein Sequence MGLPAAGRGARSPAPPRAQARATGPPGTAQGSPGC
Nucleotide Sequence CTGGGCCTACCTGCAGCAGGGCGTGGGGCGCGATCTCCAGCACCACCGCGTGCTCAGGCACGTGCCACAGGGCCTCCTGGAACAGCACAGGGCTCACCAGGTTGTTGA
CircID chr17:82088769|82089128
ORF Type ORF8
Protein Length 61
Nucleotide Length 183
Protein Sequence MLPPGWAYLQQGVGRDLQHHRVLRHVPQGLLEQHRAHQVVDIVLGGGRACQAAVPLGLGDR
Nucleotide Sequence CTGCTGCCCCCAGGCTGGGCCTACCTGCAGCAGGGCGTGGGGCGCGATCTCCAGCACCACCGCGTGCTCAGGCACGTGCCACAGGGCCTCCTGGAACAGCACAGGGCTCACCAGGTTGTTGACATTGTACTCGGCGGAGGACGTGCGTGCCAGGCTGCTGTGCCACTGGGCCTCGGGGATAGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab