CircRNA Information

General Information
circRNA Basic Information
CircID chr17:82113543|82113820
Strand -
CircType exon
Host Gene ENSG00000176155.17;
Algorism CIRI2;
Sequence ACTGAGGAGCTGCCTCCATTCATTCCCCCTCGCATTCCTGGAGCCCACGTGCTCCTTACCAAGCTCGCCTCCTGGTTCATGTTTGGGTGAAGGGCTCCACTCCACGCCAGGCTGGGCGTGGGGCCCACACCTGTCATCTCAGCACTTTGGGAGGCCAAGGCGGCAGGACTGCTTGAGCCCAGGAGTTCGAGACCAGCCTGGGTGACATAGTGAGACCCCATTTCTACAAAAAAATAAAATAACATGTAAAAAGATTAGCCAGCTATGGTGATGTGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:82113543|82113820 hsa-miR-17-5p 0 0 1
chr17:82113543|82113820 hsa-miR-17-3p 0 0 1
chr17:82113543|82113820 hsa-miR-20a-5p 0 0 1
chr17:82113543|82113820 hsa-miR-20a-3p 0 0 1
chr17:82113543|82113820 hsa-miR-93-5p 0 0 1
chr17:82113543|82113820 hsa-miR-93-3p 0 0 1
chr17:82113543|82113820 hsa-miR-106a-5p 0 0 1
chr17:82113543|82113820 hsa-miR-106a-3p 0 0 1
chr17:82113543|82113820 hsa-miR-122-5p 0 0 1
chr17:82113543|82113820 hsa-miR-122-3p 0 0 1
chr17:82113543|82113820 hsa-miR-143-5p 0 0 1
chr17:82113543|82113820 hsa-miR-143-3p 0 0 1
chr17:82113543|82113820 hsa-miR-150-5p 0 0 1
chr17:82113543|82113820 hsa-miR-150-3p 0 0 1
chr17:82113543|82113820 hsa-miR-106b-5p 0 0 1
chr17:82113543|82113820 hsa-miR-106b-3p 0 0 1
chr17:82113543|82113820 hsa-miR-302a-5p 0 0 1
chr17:82113543|82113820 hsa-miR-302a-3p 0 0 1
chr17:82113543|82113820 hsa-miR-302b-5p 0 0 1
chr17:82113543|82113820 hsa-miR-302b-3p 0 0 1
chr17:82113543|82113820 hsa-miR-302c-5p 0 0 1
chr17:82113543|82113820 hsa-miR-302c-3p 0 0 1
chr17:82113543|82113820 hsa-miR-302d-5p 0 0 1
chr17:82113543|82113820 hsa-miR-302d-3p 0 0 1
chr17:82113543|82113820 hsa-miR-372-5p 0 0 1
chr17:82113543|82113820 hsa-miR-372-3p 0 0 1
chr17:82113543|82113820 hsa-miR-373-5p 0 0 1
chr17:82113543|82113820 hsa-miR-373-3p 0 0 1
chr17:82113543|82113820 hsa-miR-20b-5p 0 0 1
chr17:82113543|82113820 hsa-miR-20b-3p 0 0 1
chr17:82113543|82113820 hsa-miR-412-5p 0 0 1
chr17:82113543|82113820 hsa-miR-412-3p 0 0 1
chr17:82113543|82113820 hsa-miR-520e-5p 0 0 1
chr17:82113543|82113820 hsa-miR-520e-3p 0 0 1
chr17:82113543|82113820 hsa-miR-520b-5p 0 0 1
chr17:82113543|82113820 hsa-miR-520b-3p 0 0 1
chr17:82113543|82113820 hsa-miR-519d-5p 0 0 1
chr17:82113543|82113820 hsa-miR-519d-3p 0 0 1
chr17:82113543|82113820 hsa-miR-520g-5p 0 0 1
chr17:82113543|82113820 hsa-miR-520g-3p 0 0 1
chr17:82113543|82113820 hsa-miR-520h 0 0 1
chr17:82113543|82113820 hsa-miR-552-5p 0 0 1
chr17:82113543|82113820 hsa-miR-552-3p 0 0 1
chr17:82113543|82113820 hsa-miR-625-5p 0 0 1
chr17:82113543|82113820 hsa-miR-625-3p 0 0 1
chr17:82113543|82113820 hsa-miR-650 1 1 1
chr17:82113543|82113820 hsa-miR-665 0 1 1
chr17:82113543|82113820 hsa-miR-302e 0 0 1
chr17:82113543|82113820 hsa-miR-1827 0 0 1
chr17:82113543|82113820 hsa-miR-129-5p 0 0 1
chr17:82113543|82113820 hsa-miR-296-5p 0 1 1
chr17:82113543|82113820 hsa-miR-512-3p 0 1 1
chr17:82113543|82113820 hsa-miR-615-5p 0 0 1
chr17:82113543|82113820 hsa-miR-520d-3p 0 0 1
chr17:82113543|82113820 hsa-miR-520a-3p 0 0 1
chr17:82113543|82113820 hsa-miR-520c-3p 0 0 1
chr17:82113543|82113820 hsa-miR-1233 0 0 1
chr17:82113543|82113820 hsa-miR-129-3p 0 0 1
chr17:82113543|82113820 hsa-miR-499-3p 0 0 1
chr17:82113543|82113820 hsa-miR-206 1 0 0
chr17:82113543|82113820 hsa-miR-658 1 0 0
chr17:82113543|82113820 hsa-miR-762 1 0 0
chr17:82113543|82113820 hsa-miR-4296 0 1 0
chr17:82113543|82113820 hsa-miR-4322 1 1 0
chr17:82113543|82113820 hsa-miR-4265 0 1 0
chr17:82113543|82113820 hsa-miR-4274 0 1 0
chr17:82113543|82113820 hsa-miR-3612 0 1 0
chr17:82113543|82113820 hsa-miR-378g 0 1 0
chr17:82113543|82113820 hsa-miR-4453 0 1 0
chr17:82113543|82113820 hsa-miR-4488 1 0 0
chr17:82113543|82113820 hsa-miR-4538 1 1 0
chr17:82113543|82113820 hsa-miR-4657 1 0 0
chr17:82113543|82113820 hsa-miR-4674 1 1 0
chr17:82113543|82113820 hsa-miR-4689 1 0 0
chr17:82113543|82113820 hsa-miR-4706 1 0 0
chr17:82113543|82113820 hsa-miR-4721 1 0 0
chr17:82113543|82113820 hsa-miR-4739 1 0 0
chr17:82113543|82113820 hsa-miR-4770 0 1 0
chr17:82113543|82113820 hsa-miR-6088 0 1 0
chr17:82113543|82113820 hsa-miR-6127 1 0 0
chr17:82113543|82113820 hsa-miR-8060 1 0 0
chr17:82113543|82113820 hsa-miR-8072 1 0 0
chr17:82113543|82113820 hsa-miR-12115 1 0 0
chr17:82113543|82113820 hsa-miR-4433b-3p 1 1 0
chr17:82113543|82113820 hsa-miR-6734-5p 1 1 0
chr17:82113543|82113820 hsa-miR-500b-3p 0 1 0
chr17:82113543|82113820 hsa-miR-504-3p 1 0 0
chr17:82113543|82113820 hsa-miR-6747-5p 1 0 0
chr17:82113543|82113820 hsa-miR-4433a-3p 1 1 0
chr17:82113543|82113820 hsa-miR-6836-3p 1 0 0
chr17:82113543|82113820 hsa-miR-212-5p 0 1 0
chr17:82113543|82113820 hsa-miR-3934-5p 0 1 0
chr17:82113543|82113820 hsa-miR-6089 1 0 0
chr17:82113543|82113820 hsa-miR-6757-5p 1 0 0
chr17:82113543|82113820 hsa-miR-4695-5p 1 1 0
chr17:82113543|82113820 hsa-miR-874-5p 0 1 0
chr17:82113543|82113820 hsa-miR-6842-3p 1 0 0
chr17:82113543|82113820 hsa-miR-3180-3p 1 0 0
chr17:82113543|82113820 hsa-miR-6793-5p 1 0 0
chr17:82113543|82113820 hsa-miR-6732-5p 1 0 0
chr17:82113543|82113820 hsa-miR-6805-5p 1 1 0
chr17:82113543|82113820 hsa-miR-23a-5p 1 0 0
chr17:82113543|82113820 hsa-miR-6798-5p 1 0 0
chr17:82113543|82113820 hsa-miR-6514-5p 0 1 0
chr17:82113543|82113820 hsa-miR-5006-5p 1 0 0
chr17:82113543|82113820 hsa-miR-1343-3p 0 1 0
chr17:82113543|82113820 hsa-miR-185-5p 1 0 0
chr17:82113543|82113820 hsa-miR-1908-3p 1 0 0
chr17:82113543|82113820 hsa-miR-5580-5p 0 1 0
chr17:82113543|82113820 hsa-miR-767-5p 0 1 0
chr17:82113543|82113820 hsa-miR-4787-5p 1 0 0
chr17:82113543|82113820 hsa-miR-7154-5p 1 0 0
chr17:82113543|82113820 hsa-miR-4776-5p 1 1 0
chr17:82113543|82113820 hsa-miR-4724-5p 0 1 0
chr17:82113543|82113820 hsa-miR-1910-5p 0 1 0
chr17:82113543|82113820 hsa-miR-1285-5p 1 1 0
chr17:82113543|82113820 hsa-miR-6838-3p 0 1 0
chr17:82113543|82113820 hsa-miR-6778-5p 1 0 0
chr17:82113543|82113820 hsa-miR-6787-5p 1 0 0
chr17:82113543|82113820 hsa-miR-6870-5p 1 0 0
chr17:82113543|82113820 hsa-miR-6752-5p 1 0 0
chr17:82113543|82113820 hsa-miR-6754-5p 1 0 0
chr17:82113543|82113820 hsa-miR-7107-5p 0 1 0
chr17:82113543|82113820 hsa-miR-6763-5p 1 0 0
chr17:82113543|82113820 hsa-miR-6779-5p 1 0 0
chr17:82113543|82113820 hsa-miR-7111-5p 1 0 0
chr17:82113543|82113820 hsa-miR-4728-5p 1 0 0
chr17:82113543|82113820 hsa-miR-328-5p 1 0 0
chr17:82113543|82113820 hsa-miR-4649-5p 1 0 0
chr17:82113543|82113820 hsa-miR-4745-5p 1 0 0
chr17:82113543|82113820 hsa-miR-6729-5p 1 0 0
chr17:82113543|82113820 hsa-miR-6794-5p 1 1 0
chr17:82113543|82113820 hsa-miR-6795-5p 1 1 0
chr17:82113543|82113820 hsa-miR-6846-5p 1 0 0
chr17:82113543|82113820 hsa-miR-6887-5p 1 0 0
chr17:82113543|82113820 hsa-miR-939-5p 1 0 0
chr17:82113543|82113820 hsa-miR-4758-5p 1 0 0
chr17:82113543|82113820 hsa-miR-6791-3p 1 0 0
chr17:82113543|82113820 hsa-miR-4716-3p 1 1 0
chr17:82113543|82113820 hsa-miR-6724-5p 1 1 0
chr17:82113543|82113820 hsa-miR-4722-3p 1 0 0
chr17:82113543|82113820 hsa-miR-6893-3p 1 1 0
chr17:82113543|82113820 hsa-miR-10400-3p 1 1 0
chr17:82113543|82113820 hsa-miR-6783-3p 0 1 0
chr17:82113543|82113820 hsa-miR-6848-3p 1 0 0
chr17:82113543|82113820 hsa-miR-619-5p 0 1 0
chr17:82113543|82113820 hsa-miR-6843-3p 0 1 0
chr17:82113543|82113820 hsa-miR-129-1-3p 0 1 0
chr17:82113543|82113820 hsa-miR-129-2-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:82113543|82113820
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MPPFIPPRIPGAHVLLTKLASWFMFG
Nucleotide Sequence CTGCCTCCATTCATTCCCCCTCGCATTCCTGGAGCCCACGTGCTCCTTACCAAGCTCGCCTCCTGGTTCATGTTTGGGTGA
CircID chr17:82113543|82113820
ORF Type ORF2
Protein Length 32
Nucleotide Length 99
Protein Sequence MGVGPTPVISALWEAKAAGLLEPRSSRPAWVT
Nucleotide Sequence CTGGGCGTGGGGCCCACACCTGTCATCTCAGCACTTTGGGAGGCCAAGGCGGCAGGACTGCTTGAGCCCAGGAGTTCGAGACCAGCCTGGGTGACATAG
CircID chr17:82113543|82113820
ORF Type ORF3
Protein Length 67
Nucleotide Length 204
Protein Sequence LRSCLHSFPLAFLEPTCSLPSSPPGSCLGEGLHSTPGWAWGPHLSSQHFGRPRRQDCLSPGVRDQPG
Nucleotide Sequence CTGAGGAGCTGCCTCCATTCATTCCCCCTCGCATTCCTGGAGCCCACGTGCTCCTTACCAAGCTCGCCTCCTGGTTCATGTTTGGGTGAAGGGCTCCACTCCACGCCAGGCTGGGCGTGGGGCCCACACCTGTCATCTCAGCACTTTGGGAGGCCAAGGCGGCAGGACTGCTTGAGCCCAGGAGTTCGAGACCAGCCTGGGTGA
CircID chr17:82113543|82113820
ORF Type ORF4
Protein Length 34
Nucleotide Length 105
Protein Sequence MVHVWVKGSTPRQAGRGAHTCHLSTLGGQGGRTA
Nucleotide Sequence CTGGTTCATGTTTGGGTGAAGGGCTCCACTCCACGCCAGGCTGGGCGTGGGGCCCACACCTGTCATCTCAGCACTTTGGGAGGCCAAGGCGGCAGGACTGCTTGA
CircID chr17:82113543|82113820
ORF Type ORF5
Protein Length 81
Nucleotide Length 243
Protein Sequence MLFYFFVEMGSHYVTQAGLELLGSSSPAALASQSAEMTGVGPTPSLAWSGALHPNMNQEASLVRSTWAPGMRGGMNGGSSS
Nucleotide Sequence ATGTTATTTTATTTTTTTGTAGAAATGGGGTCTCACTATGTCACCCAGGCTGGTCTCGAACTCCTGGGCTCAAGCAGTCCTGCCGCCTTGGCCTCCCAAAGTGCTGAGATGACAGGTGTGGGCCCCACGCCCAGCCTGGCGTGGAGTGGAGCCCTTCACCCAAACATGAACCAGGAGGCGAGCTTGGTAAGGAGCACGTGGGCTCCAGGAATGCGAGGGGGAATGAATGGAGGCAGCTCCTCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab