CircRNA Information

General Information
circRNA Basic Information
CircID chr17:82127715|82127871
Strand +
CircType exon
Host Gene ENSG00000176155.17;
Algorism CIRI2;
Sequence CTCGGCAGAAAGAAGACAGGTCCCCAAAGCCACCCCAGGCTCCCCAGCACCCTGAGGAGCATGGTCGCCAATCCCACAGCTCCTCCTCCTTTGCCAGTGGCACCCTCCAGGACATGTGGAGGTTGCTAGACCTGGGATCCAGCCCTTCTGGTGTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:82127715|82127871 hsa-miR-492 0 0 1
chr17:82127715|82127871 hsa-miR-591 0 0 1
chr17:82127715|82127871 hsa-miR-601 0 0 1
chr17:82127715|82127871 hsa-miR-608 1 0 1
chr17:82127715|82127871 hsa-miR-661 0 0 1
chr17:82127715|82127871 hsa-miR-765 1 0 1
chr17:82127715|82127871 hsa-miR-708-5p 0 0 1
chr17:82127715|82127871 hsa-miR-708-3p 0 0 1
chr17:82127715|82127871 hsa-miR-939-5p 0 0 1
chr17:82127715|82127871 hsa-miR-939-3p 0 0 1
chr17:82127715|82127871 hsa-miR-1227-5p 0 0 1
chr17:82127715|82127871 hsa-miR-1227-3p 0 0 1
chr17:82127715|82127871 hsa-miR-1287-5p 0 0 1
chr17:82127715|82127871 hsa-miR-1287-3p 0 0 1
chr17:82127715|82127871 hsa-miR-1266-5p 0 0 1
chr17:82127715|82127871 hsa-miR-1266-3p 0 0 1
chr17:82127715|82127871 hsa-miR-28-5p 0 0 1
chr17:82127715|82127871 hsa-miR-342-5p 0 0 1
chr17:82127715|82127871 hsa-miR-544 0 0 1
chr17:82127715|82127871 hsa-miR-1273 0 0 1
chr17:82127715|82127871 hsa-miR-637 1 0 0
chr17:82127715|82127871 hsa-miR-762 1 0 0
chr17:82127715|82127871 hsa-miR-760 1 0 0
chr17:82127715|82127871 hsa-miR-1293 1 0 0
chr17:82127715|82127871 hsa-miR-1275 1 0 0
chr17:82127715|82127871 hsa-miR-2861 1 0 0
chr17:82127715|82127871 hsa-miR-3196 1 0 0
chr17:82127715|82127871 hsa-miR-1268b 1 0 0
chr17:82127715|82127871 hsa-miR-4534 1 0 0
chr17:82127715|82127871 hsa-miR-4651 1 0 0
chr17:82127715|82127871 hsa-miR-4656 1 0 0
chr17:82127715|82127871 hsa-miR-4669 1 0 0
chr17:82127715|82127871 hsa-miR-4739 1 0 0
chr17:82127715|82127871 hsa-miR-4741 1 0 0
chr17:82127715|82127871 hsa-miR-4784 1 0 0
chr17:82127715|82127871 hsa-miR-5572 1 0 0
chr17:82127715|82127871 hsa-miR-5698 1 0 0
chr17:82127715|82127871 hsa-miR-5787 1 0 0
chr17:82127715|82127871 hsa-miR-6090 1 0 0
chr17:82127715|82127871 hsa-miR-6124 1 0 0
chr17:82127715|82127871 hsa-miR-6133 1 0 0
chr17:82127715|82127871 hsa-miR-8089 1 0 0
chr17:82127715|82127871 hsa-miR-12118 1 0 0
chr17:82127715|82127871 hsa-miR-4433b-3p 1 0 0
chr17:82127715|82127871 hsa-miR-7106-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6825-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6894-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6799-5p 1 0 0
chr17:82127715|82127871 hsa-miR-766-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6804-5p 1 0 0
chr17:82127715|82127871 hsa-miR-7114-5p 1 0 0
chr17:82127715|82127871 hsa-miR-4695-5p 1 0 0
chr17:82127715|82127871 hsa-miR-4722-5p 1 0 0
chr17:82127715|82127871 hsa-miR-7154-3p 1 0 0
chr17:82127715|82127871 hsa-miR-6741-5p 1 0 0
chr17:82127715|82127871 hsa-miR-3622b-5p 1 0 0
chr17:82127715|82127871 hsa-miR-3180-3p 1 0 0
chr17:82127715|82127871 hsa-miR-6772-5p 1 0 0
chr17:82127715|82127871 hsa-miR-185-3p 1 0 0
chr17:82127715|82127871 hsa-miR-6732-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6827-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6798-5p 1 0 0
chr17:82127715|82127871 hsa-miR-2467-3p 1 0 0
chr17:82127715|82127871 hsa-miR-6782-5p 1 0 0
chr17:82127715|82127871 hsa-miR-885-3p 1 0 0
chr17:82127715|82127871 hsa-miR-6749-5p 1 0 0
chr17:82127715|82127871 hsa-miR-4787-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6824-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6769b-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6812-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6870-5p 1 0 0
chr17:82127715|82127871 hsa-miR-1343-5p 1 0 0
chr17:82127715|82127871 hsa-miR-5001-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6726-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6737-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6743-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6752-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6803-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6813-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6819-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6842-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6851-5p 1 0 0
chr17:82127715|82127871 hsa-miR-7107-5p 1 0 0
chr17:82127715|82127871 hsa-miR-7110-5p 1 0 0
chr17:82127715|82127871 hsa-miR-11181-3p 1 0 0
chr17:82127715|82127871 hsa-miR-6751-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6763-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6779-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6797-5p 1 0 0
chr17:82127715|82127871 hsa-miR-7111-5p 1 0 0
chr17:82127715|82127871 hsa-miR-3620-5p 1 0 0
chr17:82127715|82127871 hsa-miR-5196-5p 1 0 0
chr17:82127715|82127871 hsa-miR-328-5p 1 0 0
chr17:82127715|82127871 hsa-miR-4649-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6794-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6846-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6848-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6858-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6883-5p 1 0 0
chr17:82127715|82127871 hsa-miR-3187-5p 1 0 0
chr17:82127715|82127871 hsa-miR-4723-5p 1 0 0
chr17:82127715|82127871 hsa-miR-3085-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6856-5p 1 0 0
chr17:82127715|82127871 hsa-miR-377-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6891-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6791-5p 1 0 0
chr17:82127715|82127871 hsa-miR-9851-5p 1 0 0
chr17:82127715|82127871 hsa-miR-6775-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:82127715|82127871
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MRSMVANPTAPPPLPVAPSRTCGGC
Nucleotide Sequence CTGAGGAGCATGGTCGCCAATCCCACAGCTCCTCCTCCTTTGCCAGTGGCACCCTCCAGGACATGTGGAGGTTGCTAG
CircID chr17:82127715|82127871
ORF Type ORF2
Protein Length 47
Nucleotide Length 141
Protein Sequence MDPRSSNLHMSWRVPLAKEEELWDWRPCSSGCWGAWGGFGDLSSFCR
Nucleotide Sequence CTGGATCCCAGGTCTAGCAACCTCCACATGTCCTGGAGGGTGCCACTGGCAAAGGAGGAGGAGCTGTGGGATTGGCGACCATGCTCCTCAGGGTGCTGGGGAGCCTGGGGTGGCTTTGGGGACCTGTCTTCTTTCTGCCGA
CircID chr17:82127715|82127871
ORF Type ORF3
Protein Length 36
Nucleotide Length 108
Protein Sequence MEGATGKGGGAVGLATMLLRVLGSLGWLWGPVFFLP
Nucleotide Sequence CTGGAGGGTGCCACTGGCAAAGGAGGAGGAGCTGTGGGATTGGCGACCATGCTCCTCAGGGTGCTGGGGAGCCTGGGGTGGCTTTGGGGACCTGTCTTCTTTCTGCCG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab